RNA–Protein interactions for RNA: ENST00000452128.6

SCAMP4-205, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 718 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-205ENST00000452128 PAF1Q8N7H5 531 aa16.06■□□□□ 0.16
SCAMP4-205ENST00000452128 SLC35B2Q8TB61 432 aa16.06■□□□□ 0.16
SCAMP4-205ENST00000452128 SLC13A1Q9BZW2 595 aa16.06■□□□□ 0.16
SCAMP4-205ENST00000452128 TSGA10Q9BZW7 698 aa16.06■□□□□ 0.16
SCAMP4-205ENST00000452128 GRPEL1Q9HAV7 217 aa16.06■□□□□ 0.16
SCAMP4-205ENST00000452128 MRPL40Q9NQ50 206 aaKnown RBP16.06■□□□□ 0.16
SCAMP4-205ENST00000452128 UBP1Q9NZI7 540 aa16.06■□□□□ 0.16
SCAMP4-205ENST00000452128 FAM153AQ9UHL3 310 aa16.06■□□□□ 0.16
SCAMP4-205ENST00000452128 R3HDM2Q9Y2K5 976 aaKnown RBP16.06■□□□□ 0.16
SCAMP4-205ENST00000452128 SPO11Q9Y5K1 396 aa16.06■□□□□ 0.16
SCAMP4-205ENST00000452128 EME2A4GXA9 379 aaPredicted RBP16.05■□□□□ 0.16
SCAMP4-205ENST00000452128 GOLGA6L6A8MZA4 724 aa16.05■□□□□ 0.16
SCAMP4-205ENST00000452128 CACNB4O00305 520 aaPredicted RBP16.05■□□□□ 0.16
SCAMP4-205ENST00000452128 PMPCBO75439 489 aa16.05■□□□□ 0.16
SCAMP4-205ENST00000452128 RFPL3O75679 317 aa16.05■□□□□ 0.16
SCAMP4-205ENST00000452128 RBP3P10745 1247 aa16.05■□□□□ 0.16
SCAMP4-205ENST00000452128 ADRA1AP35348 466 aa16.05■□□□□ 0.16
SCAMP4-205ENST00000452128 BLKP51451 505 aa16.05■□□□□ 0.16
SCAMP4-205ENST00000452128 EIF3EP60228 445 aaKnown RBP16.05■□□□□ 0.16
SCAMP4-205ENST00000452128 MEI1Q5TIA1 1274 aa16.05■□□□□ 0.16
SCAMP4-205ENST00000452128 LYSMD3Q7Z3D4 306 aa16.05■□□□□ 0.16
SCAMP4-205ENST00000452128 KDELC2Q7Z4H8 507 aa16.05■□□□□ 0.16
SCAMP4-205ENST00000452128 TMPRSS12Q86WS5 348 aa16.05■□□□□ 0.16
SCAMP4-205ENST00000452128 NRROSQ86YC3 692 aa16.05■□□□□ 0.16
SCAMP4-205ENST00000452128 SLC35F3Q8IY50 421 aa16.05■□□□□ 0.16
SCAMP4-205ENST00000452128 FSTL5Q8N475 847 aaPredicted RBP16.05■□□□□ 0.16
SCAMP4-205ENST00000452128 UBL4BQ8N7F7 174 aa16.05■□□□□ 0.16
SCAMP4-205ENST00000452128 KDF1Q8NAX2 398 aaPredicted RBP16.05■□□□□ 0.16
SCAMP4-205ENST00000452128 AP2M1Q96CW1 435 aa16.05■□□□□ 0.16
SCAMP4-205ENST00000452128 FAM118BQ9BPY3 351 aa16.05■□□□□ 0.16
SCAMP4-205ENST00000452128 RIOK2Q9BVS4 552 aaKnown RBP16.05■□□□□ 0.16
SCAMP4-205ENST00000452128 NFKBIL1Q9UBC1 381 aaPredicted RBP16.05■□□□□ 0.16
SCAMP4-205ENST00000452128 KLQ9UEF7 1012 aa16.05■□□□□ 0.16
SCAMP4-205ENST00000452128 CD84Q9UIB8 345 aa16.05■□□□□ 0.16
SCAMP4-205ENST00000452128 GUCA1BQ9UMX6 200 aa16.05■□□□□ 0.16
SCAMP4-205ENST00000452128 PTPRBP23467 1997 aa16.05■□□□□ 0.16
SCAMP4-205ENST00000452128 C1orf232A0A0U1RR37 186 aa16.04■□□□□ 0.16
SCAMP4-205ENST00000452128 PRSS38A1L453 326 aa16.04■□□□□ 0.16
SCAMP4-205ENST00000452128 C1QTNF9BB2RNN3 333 aa16.04■□□□□ 0.16
SCAMP4-205ENST00000452128 H7C0C1 242 aa16.04■□□□□ 0.16
SCAMP4-205ENST00000452128 PDE2AO00408 941 aaPredicted RBP16.04■□□□□ 0.16
SCAMP4-205ENST00000452128 AURKAO14965 403 aa16.04■□□□□ 0.16
SCAMP4-205ENST00000452128 TNFP01375 233 aa16.04■□□□□ 0.16
SCAMP4-205ENST00000452128 IVLP07476 585 aa16.04■□□□□ 0.16
SCAMP4-205ENST00000452128 PIRTP0C851 137 aa16.04■□□□□ 0.16
SCAMP4-205ENST00000452128 C1QTNF9P0C862 333 aa16.04■□□□□ 0.16
SCAMP4-205ENST00000452128 KELP23276 732 aa16.04■□□□□ 0.16
SCAMP4-205ENST00000452128 ATP5OP48047 213 aa16.04■□□□□ 0.16
SCAMP4-205ENST00000452128 INSM1Q01101 510 aaPredicted RBP16.04■□□□□ 0.16
SCAMP4-205ENST00000452128 C6orf132Q5T0Z8 1188 aa16.04■□□□□ 0.16
SCAMP4-205ENST00000452128 CDCP2Q5VXM1 449 aa16.04■□□□□ 0.16
SCAMP4-205ENST00000452128 RANBP10Q6VN20 620 aa16.04■□□□□ 0.16
SCAMP4-205ENST00000452128 C17orf82Q86X59 251 aaPredicted RBP16.04■□□□□ 0.16
SCAMP4-205ENST00000452128 TTC30BQ8N4P2 665 aa16.04■□□□□ 0.16
SCAMP4-205ENST00000452128 ATL2Q8NHH9 583 aa16.04■□□□□ 0.16
SCAMP4-205ENST00000452128 CCL4L1Q8NHW4 92 aa16.04■□□□□ 0.16
SCAMP4-205ENST00000452128 GPBAR1Q8TDU6 330 aa16.04■□□□□ 0.16
SCAMP4-205ENST00000452128 TMEM168Q9H0V1 697 aa16.04■□□□□ 0.16
SCAMP4-205ENST00000452128 GBA3Q9H227 469 aa16.04■□□□□ 0.16
SCAMP4-205ENST00000452128 PHPT1Q9NRX4 125 aaPredicted RBP16.04■□□□□ 0.16
SCAMP4-205ENST00000452128 LRP4O75096 1905 aa16.04■□□□□ 0.16
SCAMP4-205ENST00000452128 C5orf60A6NFR6 353 aa16.03■□□□□ 0.16
SCAMP4-205ENST00000452128 FADS2P1A8MWK0 482 aa16.03■□□□□ 0.16
SCAMP4-205ENST00000452128 KRT86O43790 486 aa16.03■□□□□ 0.16
SCAMP4-205ENST00000452128 GP1BAP07359 652 aa16.03■□□□□ 0.16
SCAMP4-205ENST00000452128 ALPPL2P10696 532 aa16.03■□□□□ 0.16
SCAMP4-205ENST00000452128 CHRNA4P43681 627 aa16.03■□□□□ 0.16
SCAMP4-205ENST00000452128 POLD2P49005 469 aa16.03■□□□□ 0.16
SCAMP4-205ENST00000452128 CLDN6P56747 220 aa16.03■□□□□ 0.16
SCAMP4-205ENST00000452128 DCDC1P59894 354 aa16.03■□□□□ 0.16
SCAMP4-205ENST00000452128 ELOCQ15369 112 aa16.03■□□□□ 0.16
SCAMP4-205ENST00000452128 PCSK7Q16549 785 aa16.03■□□□□ 0.16
SCAMP4-205ENST00000452128 SIRPB2Q5JXA9 342 aa16.03■□□□□ 0.16
SCAMP4-205ENST00000452128 ANKRD20A2Q5SQ80 823 aa16.03■□□□□ 0.16
SCAMP4-205ENST00000452128 ANKRD20A1Q5TYW2 823 aa16.03■□□□□ 0.16
SCAMP4-205ENST00000452128 ANKRD20A3Q5VUR7 823 aa16.03■□□□□ 0.16
SCAMP4-205ENST00000452128 GPR26Q8NDV2 337 aa16.03■□□□□ 0.16
SCAMP4-205ENST00000452128 GPR156Q8NFN8 814 aa16.03■□□□□ 0.16
SCAMP4-205ENST00000452128 FAM83DQ9H4H8 585 aa16.03■□□□□ 0.16
SCAMP4-205ENST00000452128 ZFYVE1Q9HBF4 777 aa16.03■□□□□ 0.16
SCAMP4-205ENST00000452128 KLHL8Q9P2G9 620 aaPredicted RBP16.03■□□□□ 0.16
SCAMP4-205ENST00000452128 TMPRSS11EQ9UL52 423 aa16.03■□□□□ 0.16
SCAMP4-205ENST00000452128 ZNF711Q9Y462 761 aa16.03■□□□□ 0.16
SCAMP4-205ENST00000452128 PCYT1BQ9Y5K3 369 aaPredicted RBP16.03■□□□□ 0.16
SCAMP4-205ENST00000452128 KMT2BQ9UMN6 2715 aaPredicted RBP16.03■□□□□ 0.16
SCAMP4-205ENST00000452128 OPA1O60313 960 aa16.02■□□□□ 0.16
SCAMP4-205ENST00000452128 PROS1P07225 676 aa16.02■□□□□ 0.16
SCAMP4-205ENST00000452128 ANXA6P08133 673 aa16.02■□□□□ 0.16
SCAMP4-205ENST00000452128 CCDC175P0C221 793 aa16.02■□□□□ 0.16
SCAMP4-205ENST00000452128 BPIP17213 487 aa16.02■□□□□ 0.16
SCAMP4-205ENST00000452128 CETN2P41208 172 aa16.02■□□□□ 0.16
SCAMP4-205ENST00000452128 GPR1P46091 355 aa16.02■□□□□ 0.16
SCAMP4-205ENST00000452128 E2F1Q01094 437 aa16.02■□□□□ 0.16
SCAMP4-205ENST00000452128 MPP3Q13368 585 aa16.02■□□□□ 0.16
SCAMP4-205ENST00000452128 SIX1Q15475 284 aaPredicted RBP16.02■□□□□ 0.16
SCAMP4-205ENST00000452128 SLC1A5Q15758 541 aa16.02■□□□□ 0.16
SCAMP4-205ENST00000452128 KCTD11Q693B1 232 aa16.02■□□□□ 0.16
SCAMP4-205ENST00000452128 RAET1GQ6H3X3 334 aa16.02■□□□□ 0.16
SCAMP4-205ENST00000452128 DENND5AQ6IQ26 1287 aa16.02■□□□□ 0.16
SCAMP4-205ENST00000452128 GUSBP11Q6P575 273 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms