RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 CTPS1P17812 591 aa21.63■■□□□ 1.05
C9orf3-208ENST00000451893 TRAF2Q12933 501 aa21.63■■□□□ 1.05
C9orf3-208ENST00000451893 DPYSL3Q14195 570 aa21.63■■□□□ 1.05
C9orf3-208ENST00000451893 RHOT1Q8IXI2 618 aa21.63■■□□□ 1.05
C9orf3-208ENST00000451893 PGBD5Q8N414 524 aa21.63■■□□□ 1.05
C9orf3-208ENST00000451893 RASGEF1CQ8N431 466 aa21.63■■□□□ 1.05
C9orf3-208ENST00000451893 TRAF3IP1Q8TDR0 691 aaPredicted RBP21.63■■□□□ 1.05
C9orf3-208ENST00000451893 COG1Q8WTW3 980 aa21.63■■□□□ 1.05
C9orf3-208ENST00000451893 OR1E3Q8WZA6 343 aa21.63■■□□□ 1.05
C9orf3-208ENST00000451893 RBM15Q96T37 977 aaKnown RBP eCLIP21.63■■□□□ 1.05
C9orf3-208ENST00000451893 ZNF670Q9BS34 389 aa21.63■■□□□ 1.05
C9orf3-208ENST00000451893 GOLPH3Q9H4A6 298 aa21.63■■□□□ 1.05
C9orf3-208ENST00000451893 MRPL40Q9NQ50 206 aaKnown RBP21.63■■□□□ 1.05
C9orf3-208ENST00000451893 RAI2Q9Y5P3 530 aa21.63■■□□□ 1.05
C9orf3-208ENST00000451893 DSPP15924 2871 aaKnown RBP21.63■■□□□ 1.05
C9orf3-208ENST00000451893 TMEM202A6NGA9 273 aa21.62■■□□□ 1.05
C9orf3-208ENST00000451893 TNFRSF10CO14798 259 aa21.62■■□□□ 1.05
C9orf3-208ENST00000451893 HEXIM1O94992 359 aaKnown RBP21.62■■□□□ 1.05
C9orf3-208ENST00000451893 PGLSO95336 258 aa21.62■■□□□ 1.05
C9orf3-208ENST00000451893 MAP3K6O95382 1288 aa21.62■■□□□ 1.05
C9orf3-208ENST00000451893 CD48P09326 243 aa21.62■■□□□ 1.05
C9orf3-208ENST00000451893 MYCLP1P12525 358 aaPredicted RBP21.62■■□□□ 1.05
C9orf3-208ENST00000451893 CR2P20023 1033 aa21.62■■□□□ 1.05
C9orf3-208ENST00000451893 MX2P20592 715 aa21.62■■□□□ 1.05
C9orf3-208ENST00000451893 GARSP41250 739 aaKnown RBP21.62■■□□□ 1.05
C9orf3-208ENST00000451893 RWDD2BP57060 319 aa21.62■■□□□ 1.05
C9orf3-208ENST00000451893 ANKRD20A8PQ5CZ79 823 aa21.62■■□□□ 1.05
C9orf3-208ENST00000451893 ARL14Q8N4G2 192 aa21.62■■□□□ 1.05
C9orf3-208ENST00000451893 CCNYQ8ND76 341 aa21.62■■□□□ 1.05
C9orf3-208ENST00000451893 KCNE4Q8WWG9 221 aa21.62■■□□□ 1.05
C9orf3-208ENST00000451893 CRELD1Q96HD1 420 aa21.62■■□□□ 1.05
C9orf3-208ENST00000451893 FCRL3Q96P31 734 aaPredicted RBP21.62■■□□□ 1.05
C9orf3-208ENST00000451893 STRADBQ9C0K7 418 aa21.62■■□□□ 1.05
C9orf3-208ENST00000451893 CARS2Q9HA77 564 aaKnown RBP21.62■■□□□ 1.05
C9orf3-208ENST00000451893 EPB41L5Q9HCM4 733 aa21.62■■□□□ 1.05
C9orf3-208ENST00000451893 FGF22Q9HCT0 170 aa21.62■■□□□ 1.05
C9orf3-208ENST00000451893 PACSIN2Q9UNF0 486 aaPredicted RBP21.62■■□□□ 1.05
C9orf3-208ENST00000451893 ZFYVE26Q68DK2 2539 aa21.61■■□□□ 1.05
C9orf3-208ENST00000451893 PRSS38A1L453 326 aa21.61■■□□□ 1.05
C9orf3-208ENST00000451893 PSMD11O00231 422 aa21.61■■□□□ 1.05
C9orf3-208ENST00000451893 PEX11BO96011 259 aa21.61■■□□□ 1.05
C9orf3-208ENST00000451893 RPLP0P05388 317 aaKnown RBP21.61■■□□□ 1.05
C9orf3-208ENST00000451893 HOXC4P09017 264 aaPredicted RBP21.61■■□□□ 1.05
C9orf3-208ENST00000451893 ETV3P41162 512 aa21.61■■□□□ 1.05
C9orf3-208ENST00000451893 GPR1P46091 355 aa21.61■■□□□ 1.05
C9orf3-208ENST00000451893 ERVPABLB-1P60509 514 aa21.61■■□□□ 1.05
C9orf3-208ENST00000451893 NCBP2-AS2Q69YL0 99 aa21.61■■□□□ 1.05
C9orf3-208ENST00000451893 HEATR4Q86WZ0 1026 aa21.61■■□□□ 1.05
C9orf3-208ENST00000451893 WDR36Q8NI36 951 aaKnown RBP21.61■■□□□ 1.05
C9orf3-208ENST00000451893 UBXN4Q92575 508 aa21.61■■□□□ 1.05
C9orf3-208ENST00000451893 COQ10AQ96MF6 247 aa21.61■■□□□ 1.05
C9orf3-208ENST00000451893 MAK16Q9BXY0 300 aaKnown RBP21.61■■□□□ 1.05
C9orf3-208ENST00000451893 RBM22Q9NW64 420 aaKnown RBP eCLIP21.61■■□□□ 1.05
C9orf3-208ENST00000451893 ENTPD2Q9Y5L3 495 aa21.61■■□□□ 1.05
C9orf3-208ENST00000451893 TMX2-CTNND1H3BSU7 103 aa21.6■■□□□ 1.05
C9orf3-208ENST00000451893 ZNF185O15231 689 aa21.6■■□□□ 1.05
C9orf3-208ENST00000451893 CEP104O60308 925 aa21.6■■□□□ 1.05
C9orf3-208ENST00000451893 HOXB3P14651 431 aaPredicted RBP21.6■■□□□ 1.05
C9orf3-208ENST00000451893 CES1P23141 567 aa21.6■■□□□ 1.05
C9orf3-208ENST00000451893 CXCR5P32302 372 aa21.6■■□□□ 1.05
C9orf3-208ENST00000451893 CETN2P41208 172 aa21.6■■□□□ 1.05
C9orf3-208ENST00000451893 CXADRP78310 365 aa21.6■■□□□ 1.05
C9orf3-208ENST00000451893 GALNT2Q10471 571 aa21.6■■□□□ 1.05
C9orf3-208ENST00000451893 ILF3Q12906 894 aaKnown RBP eCLIP21.6■■□□□ 1.05
C9orf3-208ENST00000451893 PAFAH1B3Q15102 231 aaKnown RBP21.6■■□□□ 1.05
C9orf3-208ENST00000451893 ATP13A4Q4VNC1 1196 aa21.6■■□□□ 1.05
C9orf3-208ENST00000451893 Q8N9G6 341 aaPredicted RBP21.6■■□□□ 1.05
C9orf3-208ENST00000451893 DTD2Q96FN9 168 aa21.6■■□□□ 1.05
C9orf3-208ENST00000451893 SCRN2Q96FV2 425 aa21.6■■□□□ 1.05
C9orf3-208ENST00000451893 CAPZA3Q96KX2 299 aa21.6■■□□□ 1.05
C9orf3-208ENST00000451893 LGR4Q9BXB1 951 aa21.6■■□□□ 1.05
C9orf3-208ENST00000451893 GSDMCQ9BYG8 508 aa21.6■■□□□ 1.05
C9orf3-208ENST00000451893 TMEM168Q9H0V1 697 aa21.6■■□□□ 1.05
C9orf3-208ENST00000451893 DNPEPQ9ULA0 475 aa21.6■■□□□ 1.05
C9orf3-208ENST00000451893 CCDC187A0A096LP49 1063 aa21.59■■□□□ 1.05
C9orf3-208ENST00000451893 UQCRHLA0A096LP55 91 aa21.59■■□□□ 1.05
C9orf3-208ENST00000451893 NPIPB15A6NHN6 443 aaPredicted RBP21.59■■□□□ 1.05
C9orf3-208ENST00000451893 PGRMC1O00264 195 aaKnown RBP21.59■■□□□ 1.05
C9orf3-208ENST00000451893 MATN3O15232 486 aa21.59■■□□□ 1.05
C9orf3-208ENST00000451893 ZW10O43264 779 aa21.59■■□□□ 1.05
C9orf3-208ENST00000451893 UQCRHP07919 91 aa21.59■■□□□ 1.05
C9orf3-208ENST00000451893 TRIM23P36406 574 aa21.59■■□□□ 1.05
C9orf3-208ENST00000451893 GNPDA1P46926 289 aa21.59■■□□□ 1.05
C9orf3-208ENST00000451893 PPM1FP49593 454 aaPredicted RBP21.59■■□□□ 1.05
C9orf3-208ENST00000451893 PEX6Q13608 980 aa21.59■■□□□ 1.05
C9orf3-208ENST00000451893 PPP2R5EQ16537 467 aa21.59■■□□□ 1.05
C9orf3-208ENST00000451893 DOK6Q6PKX4 331 aa21.59■■□□□ 1.05
C9orf3-208ENST00000451893 HSD11B1LQ7Z5J1 315 aa21.59■■□□□ 1.05
C9orf3-208ENST00000451893 SPACA3Q8IXA5 215 aa21.59■■□□□ 1.05
C9orf3-208ENST00000451893 CCDC97Q96F63 343 aaPredicted RBP21.59■■□□□ 1.05
C9orf3-208ENST00000451893 NSMCE3Q96MG7 304 aa21.59■■□□□ 1.05
C9orf3-208ENST00000451893 DDX56Q9NY93 547 aaKnown RBP21.59■■□□□ 1.05
C9orf3-208ENST00000451893 LRRD1A4D1F6 860 aa21.58■■□□□ 1.05
C9orf3-208ENST00000451893 KLK10O43240 276 aa21.58■■□□□ 1.05
C9orf3-208ENST00000451893 DXOO77932 396 aaKnown RBP21.58■■□□□ 1.05
C9orf3-208ENST00000451893 IL4RP24394 825 aa21.58■■□□□ 1.05
C9orf3-208ENST00000451893 CCNCP24863 283 aa21.58■■□□□ 1.05
C9orf3-208ENST00000451893 CCL7P80098 99 aa21.58■■□□□ 1.05
C9orf3-208ENST00000451893 DSC2Q02487 901 aa21.58■■□□□ 1.05
C9orf3-208ENST00000451893 SEL1L2Q5TEA6 688 aa21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms