RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 SPC24Q8NBT2 197 aa9.65□□□□□ -0.86
USP54-207ENST00000451492 SPATA22Q8NHS9 363 aa9.65□□□□□ -0.86
USP54-207ENST00000451492 KRT35Q92764 455 aa9.65□□□□□ -0.86
USP54-207ENST00000451492 NAT6Q93015 286 aa9.65□□□□□ -0.86
USP54-207ENST00000451492 MRFAP1L1Q96HT8 127 aa9.65□□□□□ -0.86
USP54-207ENST00000451492 OLFM3Q96PB7 478 aa9.65□□□□□ -0.86
USP54-207ENST00000451492 RIOK2Q9BVS4 552 aaKnown RBP9.65□□□□□ -0.86
USP54-207ENST00000451492 HEMGNQ9BXL5 484 aa9.65□□□□□ -0.86
USP54-207ENST00000451492 NRSN2Q9GZP1 204 aa9.65□□□□□ -0.86
USP54-207ENST00000451492 ZMYND15Q9H091 742 aa9.65□□□□□ -0.86
USP54-207ENST00000451492 EPB41L5Q9HCM4 733 aa9.65□□□□□ -0.86
USP54-207ENST00000451492 ARFGAP3Q9NP61 516 aa9.65□□□□□ -0.86
USP54-207ENST00000451492 LUC7LQ9NQ29 371 aaKnown RBP9.65□□□□□ -0.86
USP54-207ENST00000451492 AMACRQ9UHK6 382 aa9.65□□□□□ -0.86
USP54-207ENST00000451492 SATB2Q9UPW6 733 aa9.65□□□□□ -0.86
USP54-207ENST00000451492 SHOC2Q9UQ13 582 aa9.65□□□□□ -0.86
USP54-207ENST00000451492 PPIL1Q9Y3C6 166 aa9.65□□□□□ -0.86
USP54-207ENST00000451492 PRKAB1Q9Y478 270 aa9.65□□□□□ -0.86
USP54-207ENST00000451492 PLEKHM1Q9Y4G2 1056 aa9.65□□□□□ -0.86
USP54-207ENST00000451492 DGKBQ9Y6T7 804 aa9.65□□□□□ -0.86
USP54-207ENST00000451492 ZNF106Q9H2Y7 1883 aaKnown RBP9.64□□□□□ -0.87
USP54-207ENST00000451492 hCG_1818297A0A087WSY0 165 aa9.64□□□□□ -0.87
USP54-207ENST00000451492 A0A0A6YYK5 440 aaPredicted RBP9.64□□□□□ -0.87
USP54-207ENST00000451492 RCCD1A6NED2 376 aa9.64□□□□□ -0.87
USP54-207ENST00000451492 PDE2AO00408 941 aaPredicted RBP9.64□□□□□ -0.87
USP54-207ENST00000451492 PMPCBO75439 489 aa9.64□□□□□ -0.87
USP54-207ENST00000451492 NDUFA10O95299 355 aa9.64□□□□□ -0.87
USP54-207ENST00000451492 FUCA1P04066 466 aa9.64□□□□□ -0.87
USP54-207ENST00000451492 ATP1A1P05023 1023 aaKnown RBP9.64□□□□□ -0.87
USP54-207ENST00000451492 NFKB1P19838 968 aa9.64□□□□□ -0.87
USP54-207ENST00000451492 CES1P23141 567 aa9.64□□□□□ -0.87
USP54-207ENST00000451492 PTPN3P26045 913 aa9.64□□□□□ -0.87
USP54-207ENST00000451492 ITPKBP27987 946 aa9.64□□□□□ -0.87
USP54-207ENST00000451492 ABCG1P45844 678 aa9.64□□□□□ -0.87
USP54-207ENST00000451492 STC1P52823 247 aa9.64□□□□□ -0.87
USP54-207ENST00000451492 CCL7P80098 99 aa9.64□□□□□ -0.87
USP54-207ENST00000451492 ILF3Q12906 894 aaKnown RBP eCLIP9.64□□□□□ -0.879e-9■■■■■ 29.8
USP54-207ENST00000451492 BIRC2Q13490 618 aa9.64□□□□□ -0.87
USP54-207ENST00000451492 TFDP2Q14188 446 aa9.64□□□□□ -0.87
USP54-207ENST00000451492 RTP5Q14D33 572 aa9.64□□□□□ -0.87
USP54-207ENST00000451492 NOMO1Q15155 1222 aa9.64□□□□□ -0.87
USP54-207ENST00000451492 ISXQ2M1V0 245 aa9.64□□□□□ -0.87
USP54-207ENST00000451492 TFDP3Q5H9I0 405 aa9.64□□□□□ -0.87
USP54-207ENST00000451492 CCDC181Q5TID7 509 aa9.64□□□□□ -0.87
USP54-207ENST00000451492 C11orf63Q6NUN7 778 aa9.64□□□□□ -0.87
USP54-207ENST00000451492 RAD9BQ6WBX8 426 aa9.64□□□□□ -0.87
USP54-207ENST00000451492 LRRC69Q6ZNQ3 347 aa9.64□□□□□ -0.87
USP54-207ENST00000451492 B3GNT8Q7Z7M8 397 aa9.64□□□□□ -0.87
USP54-207ENST00000451492 KIAA1328Q86T90 577 aa9.64□□□□□ -0.87
USP54-207ENST00000451492 NT5DC3Q86UY8 548 aa9.64□□□□□ -0.87
USP54-207ENST00000451492 ZDHHC1Q8WTX9 485 aa9.64□□□□□ -0.87
USP54-207ENST00000451492 TFB1MQ8WVM0 346 aaKnown RBP9.64□□□□□ -0.87
USP54-207ENST00000451492 PATE1Q8WXA2 126 aa9.64□□□□□ -0.87
USP54-207ENST00000451492 SPOCK2Q92563 424 aa9.64□□□□□ -0.87
USP54-207ENST00000451492 P3H4Q92791 437 aa9.64□□□□□ -0.87
USP54-207ENST00000451492 FATE1Q969F0 183 aa9.64□□□□□ -0.87
USP54-207ENST00000451492 PANX2Q96RD6 677 aa9.64□□□□□ -0.87
USP54-207ENST00000451492 GFM1Q96RP9 751 aaKnown RBP9.64□□□□□ -0.87
USP54-207ENST00000451492 FAM118BQ9BPY3 351 aa9.64□□□□□ -0.87
USP54-207ENST00000451492 MLPHQ9BV36 600 aaPredicted RBP9.64□□□□□ -0.87
USP54-207ENST00000451492 TEX101Q9BY14 249 aa9.64□□□□□ -0.87
USP54-207ENST00000451492 FRMD8Q9BZ67 464 aaPredicted RBP9.64□□□□□ -0.87
USP54-207ENST00000451492 FOXP3Q9BZS1 431 aa9.64□□□□□ -0.87
USP54-207ENST00000451492 C10orf88Q9H8K7 445 aa9.64□□□□□ -0.87
USP54-207ENST00000451492 KCTD5Q9NXV2 234 aa9.64□□□□□ -0.87
USP54-207ENST00000451492 PKD2L2Q9NZM6 624 aa9.64□□□□□ -0.87
USP54-207ENST00000451492 KLHL8Q9P2G9 620 aaPredicted RBP9.64□□□□□ -0.87
USP54-207ENST00000451492 DKK4Q9UBT3 224 aa9.64□□□□□ -0.87
USP54-207ENST00000451492 DNPEPQ9ULA0 475 aa9.64□□□□□ -0.87
USP54-207ENST00000451492 ATXN7L1Q9ULK2 861 aaPredicted RBP9.64□□□□□ -0.87
USP54-207ENST00000451492 ENTPD2Q9Y5L3 495 aa9.64□□□□□ -0.87
USP54-207ENST00000451492 RNF215Q9Y6U7 377 aa9.64□□□□□ -0.87
USP54-207ENST00000451492 DUSP10Q9Y6W6 482 aa9.64□□□□□ -0.87
USP54-207ENST00000451492 TRBV23OR9-2A0A075B6M9 112 aa9.63□□□□□ -0.87
USP54-207ENST00000451492 ZNF487B1APH4 448 aa9.63□□□□□ -0.87
USP54-207ENST00000451492 ANKRD66B4E2M5 251 aa9.63□□□□□ -0.87
USP54-207ENST00000451492 TNFRSF10CO14798 259 aa9.63□□□□□ -0.87
USP54-207ENST00000451492 NOBOXO60393 691 aa9.63□□□□□ -0.87
USP54-207ENST00000451492 LCA5LO95447 670 aa9.63□□□□□ -0.87
USP54-207ENST00000451492 HOXC4P09017 264 aaPredicted RBP9.63□□□□□ -0.87
USP54-207ENST00000451492 ACTN2P35609 894 aa9.63□□□□□ -0.87
USP54-207ENST00000451492 ADCY8P40145 1251 aa9.63□□□□□ -0.87
USP54-207ENST00000451492 EIF2S3P41091 472 aaKnown RBP9.63□□□□□ -0.87
USP54-207ENST00000451492 ACTR1BP42025 376 aa9.63□□□□□ -0.87
USP54-207ENST00000451492 PDX1P52945 283 aa9.63□□□□□ -0.87
USP54-207ENST00000451492 HADHBP55084 474 aaKnown RBP9.63□□□□□ -0.87
USP54-207ENST00000451492 ACTR1AP61163 376 aa9.63□□□□□ -0.87
USP54-207ENST00000451492 CTBSQ01459 385 aa9.63□□□□□ -0.87
USP54-207ENST00000451492 DPTQ07507 201 aa9.63□□□□□ -0.87
USP54-207ENST00000451492 PRKD1Q15139 912 aaPredicted RBP9.63□□□□□ -0.87
USP54-207ENST00000451492 PLA2G4EQ3MJ16 856 aa9.63□□□□□ -0.87
USP54-207ENST00000451492 AMZ1Q400G9 498 aa9.63□□□□□ -0.87
USP54-207ENST00000451492 MAP9Q49MG5 647 aa9.63□□□□□ -0.87
USP54-207ENST00000451492 C14orf28Q4W4Y0 310 aa9.63□□□□□ -0.87
USP54-207ENST00000451492 ZNF648Q5T619 568 aaPredicted RBP9.63□□□□□ -0.87
USP54-207ENST00000451492 AADACL2Q6P093 401 aa9.63□□□□□ -0.87
USP54-207ENST00000451492 LVRNQ6Q4G3 990 aa9.63□□□□□ -0.87
USP54-207ENST00000451492 CHST15Q7LFX5 561 aaPredicted RBP9.63□□□□□ -0.87
USP54-207ENST00000451492 VSIG1Q86XK7 387 aa9.63□□□□□ -0.87
USP54-207ENST00000451492 NRROSQ86YC3 692 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms