RNA–Protein interactions for RNA: ENST00000451088.6

GTF3C3-207, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 488 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-207ENST00000451088 KRT23Q9C075 422 aa4.53□□□□□ -1.68
GTF3C3-207ENST00000451088 PDCL3Q9H2J4 239 aa4.53□□□□□ -1.68
GTF3C3-207ENST00000451088 CCDC134Q9H6E4 229 aa4.53□□□□□ -1.68
GTF3C3-207ENST00000451088 RAB21Q9UL25 225 aa4.53□□□□□ -1.68
GTF3C3-207ENST00000451088 PCDHA7Q9UN72 937 aa4.53□□□□□ -1.68
GTF3C3-207ENST00000451088 MRPL11Q9Y3B7 192 aaKnown RBP4.53□□□□□ -1.68
GTF3C3-207ENST00000451088 R4GN57 208 aa4.53□□□□□ -1.68
GTF3C3-207ENST00000451088 PARP14Q460N5 1801 aa4.53□□□□□ -1.68
GTF3C3-207ENST00000451088 EVPLQ92817 2033 aa4.53□□□□□ -1.68
GTF3C3-207ENST00000451088 GREB1LQ9C091 1923 aaPredicted RBP4.52□□□□□ -1.69
GTF3C3-207ENST00000451088 CNTNAP2Q9UHC6 1331 aa4.52□□□□□ -1.69
GTF3C3-207ENST00000451088 A0A0D9SFI3 127 aa4.52□□□□□ -1.69
GTF3C3-207ENST00000451088 ERICH2A1L162 156 aa4.52□□□□□ -1.69
GTF3C3-207ENST00000451088 SLC38A8A6NNN8 435 aa4.52□□□□□ -1.69
GTF3C3-207ENST00000451088 CYSRT1A8MQ03 144 aa4.52□□□□□ -1.69
GTF3C3-207ENST00000451088 PRR23D1E9PI22 279 aaPredicted RBP4.52□□□□□ -1.69
GTF3C3-207ENST00000451088 DNPH1O43598 174 aa4.52□□□□□ -1.69
GTF3C3-207ENST00000451088 SLC28A2O43868 658 aa4.52□□□□□ -1.69
GTF3C3-207ENST00000451088 DHX16O60231 1041 aaKnown RBP4.52□□□□□ -1.69
GTF3C3-207ENST00000451088 NMT2O60551 498 aa4.52□□□□□ -1.69
GTF3C3-207ENST00000451088 KLKB1P03952 638 aa4.52□□□□□ -1.69
GTF3C3-207ENST00000451088 LCKP06239 509 aa4.52□□□□□ -1.69
GTF3C3-207ENST00000451088 NGFRP08138 427 aa4.52□□□□□ -1.69
GTF3C3-207ENST00000451088 PRR23D2P0DMB1 279 aaPredicted RBP4.52□□□□□ -1.69
GTF3C3-207ENST00000451088 PEPDP12955 493 aa4.52□□□□□ -1.69
GTF3C3-207ENST00000451088 CALML3P27482 149 aa4.52□□□□□ -1.69
GTF3C3-207ENST00000451088 SLC16A2P36021 539 aa4.52□□□□□ -1.69
GTF3C3-207ENST00000451088 RASSF2P50749 326 aa4.52□□□□□ -1.69
GTF3C3-207ENST00000451088 HAND2P61296 217 aa4.52□□□□□ -1.69
GTF3C3-207ENST00000451088 RPS6P62753 249 aaKnown RBP4.52□□□□□ -1.69
GTF3C3-207ENST00000451088 NUCB1Q02818 461 aa4.52□□□□□ -1.69
GTF3C3-207ENST00000451088 BTKQ06187 659 aa4.52□□□□□ -1.69
GTF3C3-207ENST00000451088 COASYQ13057 564 aa4.52□□□□□ -1.69
GTF3C3-207ENST00000451088 STXBP2Q15833 593 aa4.52□□□□□ -1.69
GTF3C3-207ENST00000451088 Q5PR19 223 aa4.52□□□□□ -1.69
GTF3C3-207ENST00000451088 C10orf76Q5T2E6 689 aa4.52□□□□□ -1.69
GTF3C3-207ENST00000451088 HMBOX1Q6NT76 420 aa4.52□□□□□ -1.69
GTF3C3-207ENST00000451088 ERAP2Q6P179 960 aa4.52□□□□□ -1.69
GTF3C3-207ENST00000451088 PARM1Q6UWI2 310 aa4.52□□□□□ -1.69
GTF3C3-207ENST00000451088 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.52□□□□□ -1.69
GTF3C3-207ENST00000451088 SRLQ86TD4 932 aa4.52□□□□□ -1.69
GTF3C3-207ENST00000451088 SYTL1Q8IYJ3 562 aa4.52□□□□□ -1.69
GTF3C3-207ENST00000451088 UBALD2Q8IYN6 164 aa4.52□□□□□ -1.69
GTF3C3-207ENST00000451088 MIB2Q96AX9 1013 aa4.52□□□□□ -1.69
GTF3C3-207ENST00000451088 TMEM41AQ96HV5 264 aa4.52□□□□□ -1.69
GTF3C3-207ENST00000451088 TNIP3Q96KP6 325 aa4.52□□□□□ -1.69
GTF3C3-207ENST00000451088 ADAD1Q96M93 576 aaKnown RBP4.52□□□□□ -1.69
GTF3C3-207ENST00000451088 MECRQ9BV79 373 aa4.52□□□□□ -1.69
GTF3C3-207ENST00000451088 KATNAL1Q9BW62 490 aa4.52□□□□□ -1.69
GTF3C3-207ENST00000451088 MYLK2Q9H1R3 596 aa4.52□□□□□ -1.69
GTF3C3-207ENST00000451088 SIRT3Q9NTG7 399 aaPredicted RBP4.52□□□□□ -1.69
GTF3C3-207ENST00000451088 MAP3K20Q9NYL2 800 aaKnown RBP4.52□□□□□ -1.69
GTF3C3-207ENST00000451088 TNFSF13BQ9Y275 285 aa4.52□□□□□ -1.69
GTF3C3-207ENST00000451088 COPG1Q9Y678 874 aaKnown RBP4.52□□□□□ -1.69
GTF3C3-207ENST00000451088 SPTA1P02549 2419 aa4.52□□□□□ -1.69
GTF3C3-207ENST00000451088 MYH7BA7E2Y1 1941 aa4.51□□□□□ -1.69
GTF3C3-207ENST00000451088 RPS10-NUDT3A0A1W2PQS6 291 aa4.51□□□□□ -1.69
GTF3C3-207ENST00000451088 FAM90A18PA6NE21 464 aa4.51□□□□□ -1.69
GTF3C3-207ENST00000451088 CXorf65A6NEN9 183 aa4.51□□□□□ -1.69
GTF3C3-207ENST00000451088 FAM90A16PA6NEW6 464 aa4.51□□□□□ -1.69
GTF3C3-207ENST00000451088 MBD3L5A6NJ08 208 aaPredicted RBP4.51□□□□□ -1.69
GTF3C3-207ENST00000451088 FAM90A9PA6NNJ1 464 aa4.51□□□□□ -1.69
GTF3C3-207ENST00000451088 C4orf47A7E2U8 309 aa4.51□□□□□ -1.69
GTF3C3-207ENST00000451088 FAM90A5PA8MXJ8 464 aa4.51□□□□□ -1.69
GTF3C3-207ENST00000451088 LACTBL1A8MY62 500 aa4.51□□□□□ -1.69
GTF3C3-207ENST00000451088 MCIDASD6RGH6 385 aa4.51□□□□□ -1.69
GTF3C3-207ENST00000451088 PRC1O43663 620 aa4.51□□□□□ -1.69
GTF3C3-207ENST00000451088 ASNA1O43681 348 aa4.51□□□□□ -1.69
GTF3C3-207ENST00000451088 NBNO60934 754 aa4.51□□□□□ -1.69
GTF3C3-207ENST00000451088 EIF3JO75822 258 aaKnown RBP4.51□□□□□ -1.69
GTF3C3-207ENST00000451088 LARGE1O95461 756 aa4.51□□□□□ -1.69
GTF3C3-207ENST00000451088 GH1P01241 217 aa4.51□□□□□ -1.69
GTF3C3-207ENST00000451088 CXCL10P02778 98 aa4.51□□□□□ -1.69
GTF3C3-207ENST00000451088 FAM90A15PP0C7V4 464 aa4.51□□□□□ -1.69
GTF3C3-207ENST00000451088 FAM90A14PP0C7W9 464 aa4.51□□□□□ -1.69
GTF3C3-207ENST00000451088 TGFB3P10600 412 aa4.51□□□□□ -1.69
GTF3C3-207ENST00000451088 CASTP20810 708 aaKnown RBP4.51□□□□□ -1.69
GTF3C3-207ENST00000451088 ANP32AP39687 249 aaKnown RBP4.51□□□□□ -1.69
GTF3C3-207ENST00000451088 SNAP25P60880 206 aa4.51□□□□□ -1.69
GTF3C3-207ENST00000451088 ARHGAP8P85298 464 aa4.51□□□□□ -1.69
GTF3C3-207ENST00000451088 CDC37Q16543 378 aaPredicted RBP4.51□□□□□ -1.69
GTF3C3-207ENST00000451088 USH1GQ495M9 461 aa4.51□□□□□ -1.69
GTF3C3-207ENST00000451088 ARHGEF16Q5VV41 709 aa4.51□□□□□ -1.69
GTF3C3-207ENST00000451088 PDXDC1Q6P996 788 aa4.51□□□□□ -1.69
GTF3C3-207ENST00000451088 CWC27Q6UX04 472 aaKnown RBP4.51□□□□□ -1.69
GTF3C3-207ENST00000451088 ZNF589Q86UQ0 364 aaPredicted RBP4.51□□□□□ -1.69
GTF3C3-207ENST00000451088 GATAD2AQ86YP4 633 aa4.51□□□□□ -1.69
GTF3C3-207ENST00000451088 CCDC105Q8IYK2 499 aa4.51□□□□□ -1.69
GTF3C3-207ENST00000451088 FAM186BQ8IYM0 893 aa4.51□□□□□ -1.69
GTF3C3-207ENST00000451088 SUMF1Q8NBK3 374 aa4.51□□□□□ -1.69
GTF3C3-207ENST00000451088 CTAGE1Q96RT6 745 aa4.51□□□□□ -1.69
GTF3C3-207ENST00000451088 MAP7D2Q96T17 732 aa4.51□□□□□ -1.69
GTF3C3-207ENST00000451088 RMDN3Q96TC7 470 aa4.51□□□□□ -1.69
GTF3C3-207ENST00000451088 NPAS1Q99742 590 aa4.51□□□□□ -1.69
GTF3C3-207ENST00000451088 RTKNQ9BST9 563 aa4.51□□□□□ -1.69
GTF3C3-207ENST00000451088 LMAN2LQ9H0V9 348 aa4.51□□□□□ -1.69
GTF3C3-207ENST00000451088 MFSD1Q9H3U5 465 aa4.51□□□□□ -1.69
GTF3C3-207ENST00000451088 SELENONQ9NZV5 590 aa4.51□□□□□ -1.69
GTF3C3-207ENST00000451088 CNTN6Q9UQ52 1028 aa4.51□□□□□ -1.69
GTF3C3-207ENST00000451088 DTX4Q9Y2E6 619 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms