RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.61□□□□□ -1.03
LSM5-208ENST00000450169 SMG8Q8ND04 991 aaKnown RBP8.61□□□□□ -1.03
LSM5-208ENST00000450169 CHDHQ8NE62 594 aaPredicted RBP8.61□□□□□ -1.03
LSM5-208ENST00000450169 RDH11Q8TC12 318 aa8.61□□□□□ -1.03
LSM5-208ENST00000450169 ROPN1LQ96C74 230 aa8.61□□□□□ -1.03
LSM5-208ENST00000450169 UBXN10Q96LJ8 280 aa8.61□□□□□ -1.03
LSM5-208ENST00000450169 CPNE1Q99829 537 aa8.61□□□□□ -1.03
LSM5-208ENST00000450169 GDF15Q99988 308 aa8.61□□□□□ -1.03
LSM5-208ENST00000450169 KIFC3Q9BVG8 833 aa8.61□□□□□ -1.03
LSM5-208ENST00000450169 ZNF518BQ9C0D4 1074 aa8.61□□□□□ -1.03
LSM5-208ENST00000450169 CCDC90BQ9GZT6 254 aa8.61□□□□□ -1.03
LSM5-208ENST00000450169 ACOXLQ9NUZ1 547 aa8.61□□□□□ -1.03
LSM5-208ENST00000450169 FBXO28Q9NVF7 368 aa8.61□□□□□ -1.03
LSM5-208ENST00000450169 UCKL1Q9NWZ5 548 aa8.61□□□□□ -1.03
LSM5-208ENST00000450169 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.61□□□□□ -1.03
LSM5-208ENST00000450169 ADAM28Q9UKQ2 775 aa8.61□□□□□ -1.03
LSM5-208ENST00000450169 USP18Q9UMW8 372 aa8.61□□□□□ -1.03
LSM5-208ENST00000450169 PCDHB3Q9Y5E6 796 aa8.61□□□□□ -1.03
LSM5-208ENST00000450169 A8MX80 341 aa8.61□□□□□ -1.03
LSM5-208ENST00000450169 ARPC2O15144 300 aa8.61□□□□□ -1.03
LSM5-208ENST00000450169 UBDO15205 165 aa8.61□□□□□ -1.03
LSM5-208ENST00000450169 MAP3K6O95382 1288 aa8.61□□□□□ -1.03
LSM5-208ENST00000450169 VNN1O95497 513 aa8.61□□□□□ -1.03
LSM5-208ENST00000450169 CCNE2O96020 404 aa8.61□□□□□ -1.03
LSM5-208ENST00000450169 YES1P07947 543 aa8.61□□□□□ -1.03
LSM5-208ENST00000450169 ERVK-10P10266 1014 aa8.61□□□□□ -1.03
LSM5-208ENST00000450169 PGAM1P18669 254 aa8.61□□□□□ -1.03
LSM5-208ENST00000450169 BDNFP23560 247 aa8.61□□□□□ -1.03
LSM5-208ENST00000450169 ZNF132P52740 706 aa8.61□□□□□ -1.03
LSM5-208ENST00000450169 TPD52P55327 224 aaPredicted RBP8.61□□□□□ -1.03
LSM5-208ENST00000450169 RPS8P62241 208 aaKnown RBP8.61□□□□□ -1.03
LSM5-208ENST00000450169 PRKCEQ02156 737 aa8.61□□□□□ -1.03
LSM5-208ENST00000450169 STK11Q15831 433 aa8.61□□□□□ -1.03
LSM5-208ENST00000450169 ANO4Q32M45 955 aa8.61□□□□□ -1.03
LSM5-208ENST00000450169 GPAT2Q6NUI2 795 aa8.61□□□□□ -1.03
LSM5-208ENST00000450169 DPH6Q7L8W6 267 aa8.61□□□□□ -1.03
LSM5-208ENST00000450169 PLD3Q8IV08 490 aa8.61□□□□□ -1.03
LSM5-208ENST00000450169 TBC1D21Q8IYX1 336 aa8.61□□□□□ -1.03
LSM5-208ENST00000450169 PLD5Q8N7P1 536 aa8.61□□□□□ -1.03
LSM5-208ENST00000450169 KDM1BQ8NB78 822 aa8.61□□□□□ -1.03
LSM5-208ENST00000450169 TP53I13Q8NBR0 393 aaPredicted RBP8.61□□□□□ -1.03
LSM5-208ENST00000450169 TMEM161BQ8NDZ6 487 aa8.61□□□□□ -1.03
LSM5-208ENST00000450169 MFSD3Q96ES6 412 aa8.61□□□□□ -1.03
LSM5-208ENST00000450169 METTL2AQ96IZ6 378 aaKnown RBP8.61□□□□□ -1.03
LSM5-208ENST00000450169 ELMO2Q96JJ3 720 aa8.61□□□□□ -1.03
LSM5-208ENST00000450169 RNF170Q96K19 258 aa8.61□□□□□ -1.03
LSM5-208ENST00000450169 HSFY1Q96LI6 401 aa8.61□□□□□ -1.03
LSM5-208ENST00000450169 RIPOR3Q96MK2 946 aa8.61□□□□□ -1.03
LSM5-208ENST00000450169 ZNF300Q96RE9 604 aaPredicted RBP8.61□□□□□ -1.03
LSM5-208ENST00000450169 RBBP8Q99708 897 aa8.61□□□□□ -1.03
LSM5-208ENST00000450169 TEKT3Q9BXF9 490 aa8.61□□□□□ -1.03
LSM5-208ENST00000450169 GON7Q9BXV9 100 aa8.61□□□□□ -1.03
LSM5-208ENST00000450169 DNAI2Q9GZS0 605 aa8.61□□□□□ -1.03
LSM5-208ENST00000450169 CAB39LQ9H9S4 337 aa8.61□□□□□ -1.03
LSM5-208ENST00000450169 PAK1IP1Q9NWT1 392 aaPredicted RBP8.61□□□□□ -1.03
LSM5-208ENST00000450169 MAT2BQ9NZL9 334 aa8.61□□□□□ -1.03
LSM5-208ENST00000450169 CCNL1Q9UK58 526 aaPredicted RBP8.61□□□□□ -1.03
LSM5-208ENST00000450169 NUDT5Q9UKK9 219 aa8.61□□□□□ -1.03
LSM5-208ENST00000450169 NAALAD2Q9Y3Q0 740 aa8.61□□□□□ -1.03
LSM5-208ENST00000450169 MTF2Q9Y483 593 aaPredicted RBP8.61□□□□□ -1.03
LSM5-208ENST00000450169 INPP4BO15327 924 aa8.6□□□□□ -1.03
LSM5-208ENST00000450169 PDPK1O15530 556 aa8.6□□□□□ -1.03
LSM5-208ENST00000450169 CABYRO75952 493 aa8.6□□□□□ -1.03
LSM5-208ENST00000450169 TRUB2O95900 331 aaKnown RBP8.6□□□□□ -1.03
LSM5-208ENST00000450169 MT-ND1P03886 318 aa8.6□□□□□ -1.03
LSM5-208ENST00000450169 C4BPAP04003 597 aaKnown RBP8.6□□□□□ -1.03
LSM5-208ENST00000450169 THRBP10828 461 aa8.6□□□□□ -1.03
LSM5-208ENST00000450169 DBTP11182 482 aaKnown RBP8.6□□□□□ -1.03
LSM5-208ENST00000450169 HSD17B1P14061 328 aa8.6□□□□□ -1.03
LSM5-208ENST00000450169 ALOX12P18054 663 aa8.6□□□□□ -1.03
LSM5-208ENST00000450169 SPRP35270 261 aaPredicted RBP8.6□□□□□ -1.03
LSM5-208ENST00000450169 MAPK8P45983 427 aa8.6□□□□□ -1.03
LSM5-208ENST00000450169 ALDH3A2P51648 485 aa8.6□□□□□ -1.03
LSM5-208ENST00000450169 NDST1P52848 882 aa8.6□□□□□ -1.03
LSM5-208ENST00000450169 LIMK2P53671 638 aa8.6□□□□□ -1.03
LSM5-208ENST00000450169 ARSFP54793 590 aa8.6□□□□□ -1.03
LSM5-208ENST00000450169 MLLT6P55198 1093 aaPredicted RBP8.6□□□□□ -1.03
LSM5-208ENST00000450169 TFAMQ00059 246 aaKnown RBP8.6□□□□□ -1.03
LSM5-208ENST00000450169 MEP1AQ16819 746 aa8.6□□□□□ -1.03
LSM5-208ENST00000450169 C5orf22Q49AR2 442 aa8.6□□□□□ -1.03
LSM5-208ENST00000450169 ESCO2Q56NI9 601 aa8.6□□□□□ -1.03
LSM5-208ENST00000450169 ZNF484Q5JVG2 852 aa8.6□□□□□ -1.03
LSM5-208ENST00000450169 CCNJQ5T5M9 372 aa8.6□□□□□ -1.03
LSM5-208ENST00000450169 NXNL2Q5VZ03 156 aa8.6□□□□□ -1.03
LSM5-208ENST00000450169 FSTL4Q6MZW2 842 aa8.6□□□□□ -1.03
LSM5-208ENST00000450169 PNCKQ6P2M8 343 aa8.6□□□□□ -1.03
LSM5-208ENST00000450169 HID1Q8IV36 788 aa8.6□□□□□ -1.03
LSM5-208ENST00000450169 TCAIMQ8N3R3 496 aa8.6□□□□□ -1.03
LSM5-208ENST00000450169 WDTC1Q8N5D0 677 aa8.6□□□□□ -1.03
LSM5-208ENST00000450169 FAR1Q8WVX9 515 aa8.6□□□□□ -1.03
LSM5-208ENST00000450169 RORBQ92753 470 aa8.6□□□□□ -1.03
LSM5-208ENST00000450169 CEP170P1Q96L14 293 aa8.6□□□□□ -1.03
LSM5-208ENST00000450169 SAP130Q9H0E3 1048 aa8.6□□□□□ -1.03
LSM5-208ENST00000450169 TASP1Q9H6P5 420 aa8.6□□□□□ -1.03
LSM5-208ENST00000450169 ZNF304Q9HCX3 659 aa8.6□□□□□ -1.03
LSM5-208ENST00000450169 TM9SF3Q9HD45 589 aa8.6□□□□□ -1.03
LSM5-208ENST00000450169 FBXL12Q9NXK8 326 aa8.6□□□□□ -1.03
LSM5-208ENST00000450169 ABCD2Q9UBJ2 740 aa8.6□□□□□ -1.03
LSM5-208ENST00000450169 OSGIN1Q9UJX0 560 aa8.6□□□□□ -1.03
LSM5-208ENST00000450169 VPS4AQ9UN37 437 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms