RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 KXD1Q9BQD3 176 aa14.22□□□□□ -0.13
USP39-207ENST00000450066 POPDC3Q9HBV1 291 aa14.22□□□□□ -0.13
USP39-207ENST00000450066 GTSE1Q9NYZ3 720 aa14.22□□□□□ -0.13
USP39-207ENST00000450066 IL36AQ9UHA7 158 aa14.22□□□□□ -0.13
USP39-207ENST00000450066 APPL1Q9UKG1 709 aa14.22□□□□□ -0.13
USP39-207ENST00000450066 MTCH2Q9Y6C9 303 aa14.22□□□□□ -0.13
USP39-207ENST00000450066 SLC30A1Q9Y6M5 507 aa14.22□□□□□ -0.13
USP39-207ENST00000450066 UNC80Q8N2C7 3258 aa14.22□□□□□ -0.13
USP39-207ENST00000450066 TSPAN11A1L157 253 aa14.21□□□□□ -0.13
USP39-207ENST00000450066 FDXRP22570 491 aa14.21□□□□□ -0.13
USP39-207ENST00000450066 GJA4P35212 333 aa14.21□□□□□ -0.13
USP39-207ENST00000450066 LTBRP36941 435 aa14.21□□□□□ -0.13
USP39-207ENST00000450066 OPRD1P41143 372 aa14.21□□□□□ -0.13
USP39-207ENST00000450066 CDKN1CP49918 316 aaPredicted RBP14.21□□□□□ -0.13
USP39-207ENST00000450066 PTPN5P54829 565 aa14.21□□□□□ -0.13
USP39-207ENST00000450066 KDSRQ06136 332 aa14.21□□□□□ -0.13
USP39-207ENST00000450066 COL19A1Q14993 1142 aa14.21□□□□□ -0.13
USP39-207ENST00000450066 ARSIQ5FYB1 569 aa14.21□□□□□ -0.13
USP39-207ENST00000450066 TMEM151AQ8N4L1 468 aa14.21□□□□□ -0.13
USP39-207ENST00000450066 TERB1Q8NA31 727 aa14.21□□□□□ -0.13
USP39-207ENST00000450066 HCAR2Q8TDS4 363 aa14.21□□□□□ -0.13
USP39-207ENST00000450066 MSLNLQ96KJ4 702 aa14.21□□□□□ -0.13
USP39-207ENST00000450066 UBXN10Q96LJ8 280 aa14.21□□□□□ -0.13
USP39-207ENST00000450066 AARSD1Q9BTE6 412 aaKnown RBP14.21□□□□□ -0.13
USP39-207ENST00000450066 POMKQ9H5K3 350 aa14.21□□□□□ -0.13
USP39-207ENST00000450066 GPAMQ9HCL2 828 aa14.21□□□□□ -0.13
USP39-207ENST00000450066 IL26Q9NPH9 171 aa14.21□□□□□ -0.13
USP39-207ENST00000450066 MID2Q9UJV3 735 aa14.21□□□□□ -0.13
USP39-207ENST00000450066 FNDC3AQ9Y2H6 1198 aaKnown RBP14.21□□□□□ -0.13
USP39-207ENST00000450066 G3V2L1 256 aa14.21□□□□□ -0.14
USP39-207ENST00000450066 DNAJC6O75061 913 aa14.21□□□□□ -0.14
USP39-207ENST00000450066 SRP72O76094 671 aaKnown RBP14.21□□□□□ -0.14
USP39-207ENST00000450066 WISP3O95389 354 aaPredicted RBP14.21□□□□□ -0.14
USP39-207ENST00000450066 CTSLP07711 333 aa14.21□□□□□ -0.14
USP39-207ENST00000450066 KCNA4P22459 653 aa14.21□□□□□ -0.14
USP39-207ENST00000450066 EIF2DP41214 584 aaKnown RBP14.21□□□□□ -0.14
USP39-207ENST00000450066 SUOXP51687 545 aa14.21□□□□□ -0.14
USP39-207ENST00000450066 KPNA2P52292 529 aaKnown RBP14.21□□□□□ -0.14
USP39-207ENST00000450066 ADARP55265 1226 aaKnown RBP14.21□□□□□ -0.14
USP39-207ENST00000450066 BST1Q10588 318 aa14.21□□□□□ -0.14
USP39-207ENST00000450066 DLG1Q12959 904 aa14.21□□□□□ -0.14
USP39-207ENST00000450066 FAM83EQ2M2I3 478 aa14.21□□□□□ -0.14
USP39-207ENST00000450066 LRRC66Q68CR7 880 aa14.21□□□□□ -0.14
USP39-207ENST00000450066 CERS6Q6ZMG9 384 aa14.21□□□□□ -0.14
USP39-207ENST00000450066 EP400NLQ6ZTU2 488 aa14.21□□□□□ -0.14
USP39-207ENST00000450066 TSPAN33Q86UF1 283 aa14.21□□□□□ -0.14
USP39-207ENST00000450066 C10orf107Q8IVU9 208 aa14.21□□□□□ -0.14
USP39-207ENST00000450066 NXNL1Q96CM4 212 aa14.21□□□□□ -0.14
USP39-207ENST00000450066 C7orf26Q96N11 449 aa14.21□□□□□ -0.14
USP39-207ENST00000450066 MTG2Q9H4K7 406 aa14.21□□□□□ -0.14
USP39-207ENST00000450066 FAM96AQ9H5X1 160 aa14.21□□□□□ -0.14
USP39-207ENST00000450066 DKK3Q9UBP4 350 aa14.21□□□□□ -0.14
USP39-207ENST00000450066 KIAA1549LQ6ZVL6 1849 aa14.2□□□□□ -0.14
USP39-207ENST00000450066 UBA6A0AVT1 1052 aaPredicted RBP14.2□□□□□ -0.14
USP39-207ENST00000450066 A8MX80 341 aa14.2□□□□□ -0.14
USP39-207ENST00000450066 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.2□□□□□ -0.14
USP39-207ENST00000450066 GAPDHSO14556 408 aaPredicted RBP14.2□□□□□ -0.14
USP39-207ENST00000450066 SNNO75324 88 aaPredicted RBP14.2□□□□□ -0.14
USP39-207ENST00000450066 TGDSO95455 350 aa14.2□□□□□ -0.14
USP39-207ENST00000450066 PRAMEF1O95521 474 aa14.2□□□□□ -0.14
USP39-207ENST00000450066 FGF3P11487 239 aaPredicted RBP14.2□□□□□ -0.14
USP39-207ENST00000450066 BPIP17213 487 aa14.2□□□□□ -0.14
USP39-207ENST00000450066 POU3F3P20264 500 aaPredicted RBP14.2□□□□□ -0.14
USP39-207ENST00000450066 GRK2P25098 689 aa14.2□□□□□ -0.14
USP39-207ENST00000450066 GDI1P31150 447 aa14.2□□□□□ -0.14
USP39-207ENST00000450066 PTGER3P43115 390 aa14.2□□□□□ -0.14
USP39-207ENST00000450066 HNRNPH2P55795 449 aaKnown RBP14.2□□□□□ -0.14
USP39-207ENST00000450066 TIAL1Q01085 375 aaKnown RBP eCLIP14.2□□□□□ -0.14
USP39-207ENST00000450066 PTSQ03393 145 aa14.2□□□□□ -0.14
USP39-207ENST00000450066 STX3Q13277 289 aa14.2□□□□□ -0.14
USP39-207ENST00000450066 HNRNPA1L2Q32P51 320 aaKnown RBP14.2□□□□□ -0.14
USP39-207ENST00000450066 FNDC3BQ53EP0 1204 aaKnown RBP14.2□□□□□ -0.14
USP39-207ENST00000450066 ZNF805Q5CZA5 627 aa14.2□□□□□ -0.14
USP39-207ENST00000450066 AGAP9Q5VTM2 703 aa14.2□□□□□ -0.14
USP39-207ENST00000450066 C6orf89Q6UWU4 347 aa14.2□□□□□ -0.14
USP39-207ENST00000450066 TAS2R42Q7RTR8 314 aa14.2□□□□□ -0.14
USP39-207ENST00000450066 STK40Q8N2I9 435 aa14.2□□□□□ -0.14
USP39-207ENST00000450066 FSTL5Q8N475 847 aaPredicted RBP14.2□□□□□ -0.14
USP39-207ENST00000450066 PPP1R14CQ8TAE6 165 aa14.2□□□□□ -0.14
USP39-207ENST00000450066 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.2□□□□□ -0.14
USP39-207ENST00000450066 NECTIN4Q96NY8 510 aa14.2□□□□□ -0.14
USP39-207ENST00000450066 BIRC8Q96P09 236 aa14.2□□□□□ -0.14
USP39-207ENST00000450066 TRMT61BQ9BVS5 477 aaKnown RBP14.2□□□□□ -0.14
USP39-207ENST00000450066 CCDC68Q9H2F9 335 aa14.2□□□□□ -0.14
USP39-207ENST00000450066 IGSF5Q9NSI5 407 aa14.2□□□□□ -0.14
USP39-207ENST00000450066 ARL2BPQ9Y2Y0 163 aa14.2□□□□□ -0.14
USP39-207ENST00000450066 COL4A3Q01955 1670 aa14.2□□□□□ -0.14
USP39-207ENST00000450066 GLYATL1P3A0A0U1RQE8 302 aa14.19□□□□□ -0.14
USP39-207ENST00000450066 TBC1D3BA6NDS4 549 aa14.19□□□□□ -0.14
USP39-207ENST00000450066 TARM1B6A8C7 271 aa14.19□□□□□ -0.14
USP39-207ENST00000450066 LTA4HP09960 611 aaKnown RBP14.19□□□□□ -0.14
USP39-207ENST00000450066 CCDC166P0CW27 439 aa14.19□□□□□ -0.14
USP39-207ENST00000450066 LHCGRP22888 699 aa14.19□□□□□ -0.14
USP39-207ENST00000450066 NFKBIAP25963 317 aa14.19□□□□□ -0.14
USP39-207ENST00000450066 FMO4P31512 558 aa14.19□□□□□ -0.14
USP39-207ENST00000450066 SPAM1P38567 509 aa14.19□□□□□ -0.14
USP39-207ENST00000450066 GLRBP48167 497 aa14.19□□□□□ -0.14
USP39-207ENST00000450066 OCRLQ01968 901 aa14.19□□□□□ -0.14
USP39-207ENST00000450066 SF3A3Q12874 501 aaKnown RBP eCLIP14.19□□□□□ -0.14
USP39-207ENST00000450066 NFATC2Q13469 925 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms