RNA–Protein interactions for RNA: ENST00000449307.3

AC006001.3-201, humanhuman

TSL 3 BASIC

Gene AC006001.3, Length 7,092 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006001.3-201ENST00000449307 UBXN7O94888 489 aa12.72□□□□□ -0.37
AC006001.3-201ENST00000449307 LDLRP01130 860 aa12.72□□□□□ -0.37
AC006001.3-201ENST00000449307 CASP5P51878 434 aa12.72□□□□□ -0.37
AC006001.3-201ENST00000449307 RIN1Q13671 783 aa12.72□□□□□ -0.37
AC006001.3-201ENST00000449307 AKIRIN2Q53H80 203 aa12.72□□□□□ -0.37
AC006001.3-201ENST00000449307 ARSIQ5FYB1 569 aa12.72□□□□□ -0.37
AC006001.3-201ENST00000449307 CYB5D1Q6P9G0 228 aa12.72□□□□□ -0.37
AC006001.3-201ENST00000449307 CAMK1DQ8IU85 385 aa12.72□□□□□ -0.37
AC006001.3-201ENST00000449307 KAZALD1Q96I82 304 aa12.72□□□□□ -0.37
AC006001.3-201ENST00000449307 GDI2P50395 445 aaKnown RBP12.72□□□□□ -0.37
AC006001.3-201ENST00000449307 KCNK18Q7Z418 384 aa12.72□□□□□ -0.37
AC006001.3-201ENST00000449307 HEATR4Q86WZ0 1026 aa12.72□□□□□ -0.37
AC006001.3-201ENST00000449307 OR4K2Q8NGD2 314 aa12.72□□□□□ -0.37
AC006001.3-201ENST00000449307 FBXO25Q8TCJ0 367 aa12.72□□□□□ -0.37
AC006001.3-201ENST00000449307 LRRC46Q96FV0 321 aa12.72□□□□□ -0.37
AC006001.3-201ENST00000449307 PPP3R2Q96LZ3 170 aa12.72□□□□□ -0.37
AC006001.3-201ENST00000449307 SIKE1Q9BRV8 207 aa12.72□□□□□ -0.37
AC006001.3-201ENST00000449307 ADAM7Q9H2U9 754 aa12.72□□□□□ -0.37
AC006001.3-201ENST00000449307 PRDM16Q9HAZ2 1276 aa12.72□□□□□ -0.37
AC006001.3-201ENST00000449307 NEMP2A6NFY4 417 aa12.72□□□□□ -0.37
AC006001.3-201ENST00000449307 NAB1Q13506 487 aa12.72□□□□□ -0.37
AC006001.3-201ENST00000449307 ZBTB2Q8N680 514 aa12.72□□□□□ -0.37
AC006001.3-201ENST00000449307 HIST1H2AAQ96QV6 131 aa12.72□□□□□ -0.37
AC006001.3-201ENST00000449307 FANCFQ9NPI8 374 aa12.72□□□□□ -0.37
AC006001.3-201ENST00000449307 CACNG4Q9UBN1 327 aa12.72□□□□□ -0.37
AC006001.3-201ENST00000449307 OGDHLQ9ULD0 1010 aa12.72□□□□□ -0.37
AC006001.3-201ENST00000449307 FGFR3P22607 806 aa12.71□□□□□ -0.37
AC006001.3-201ENST00000449307 SEPHS1P49903 392 aa12.71□□□□□ -0.37
AC006001.3-201ENST00000449307 GTF2BQ00403 316 aa12.71□□□□□ -0.37
AC006001.3-201ENST00000449307 SAMD4BQ5PRF9 694 aaKnown RBP12.71□□□□□ -0.37
AC006001.3-201ENST00000449307 OAFQ86UD1 273 aa12.71□□□□□ -0.37
AC006001.3-201ENST00000449307 LRRC49Q8IUZ0 686 aa12.71□□□□□ -0.37
AC006001.3-201ENST00000449307 OFCC1Q8IZS5 231 aa12.71□□□□□ -0.37
AC006001.3-201ENST00000449307 LNX2Q8N448 690 aa12.71□□□□□ -0.37
AC006001.3-201ENST00000449307 CCDC54Q8NEL0 328 aa12.71□□□□□ -0.37
AC006001.3-201ENST00000449307 OR5T3Q8NGG3 340 aa12.71□□□□□ -0.37
AC006001.3-201ENST00000449307 CRELD1Q96HD1 420 aa12.71□□□□□ -0.37
AC006001.3-201ENST00000449307 APOPT1Q96IL0 206 aa12.71□□□□□ -0.37
AC006001.3-201ENST00000449307 THAP1Q9NVV9 213 aa12.71□□□□□ -0.37
AC006001.3-201ENST00000449307 KCTD5Q9NXV2 234 aa12.71□□□□□ -0.37
AC006001.3-201ENST00000449307 PTGFRNQ9P2B2 879 aa12.71□□□□□ -0.37
AC006001.3-201ENST00000449307 ZNF208O43345 1280 aa12.71□□□□□ -0.37
AC006001.3-201ENST00000449307 TSPAN1O60635 241 aa12.71□□□□□ -0.37
AC006001.3-201ENST00000449307 ACTR1BP42025 376 aa12.71□□□□□ -0.37
AC006001.3-201ENST00000449307 ACTR1AP61163 376 aa12.71□□□□□ -0.37
AC006001.3-201ENST00000449307 PDGFRLQ15198 375 aa12.71□□□□□ -0.37
AC006001.3-201ENST00000449307 AADACL2Q6P093 401 aa12.71□□□□□ -0.37
AC006001.3-201ENST00000449307 GPR88Q9GZN0 384 aa12.71□□□□□ -0.37
AC006001.3-201ENST00000449307 UNC93B1Q9H1C4 597 aa12.71□□□□□ -0.37
AC006001.3-201ENST00000449307 FAM83DQ9H4H8 585 aa12.71□□□□□ -0.37
AC006001.3-201ENST00000449307 STX11O75558 287 aa12.71□□□□□ -0.37
AC006001.3-201ENST00000449307 SAGP10523 405 aaPredicted RBP12.71□□□□□ -0.37
AC006001.3-201ENST00000449307 SLC6A2P23975 617 aa12.71□□□□□ -0.37
AC006001.3-201ENST00000449307 ATXN1P54253 815 aaKnown RBP12.71□□□□□ -0.37
AC006001.3-201ENST00000449307 PSMD4P55036 377 aaKnown RBP12.71□□□□□ -0.37
AC006001.3-201ENST00000449307 KLHL17Q6TDP4 642 aa12.71□□□□□ -0.37
AC006001.3-201ENST00000449307 PACS2Q86VP3 889 aa12.71□□□□□ -0.37
AC006001.3-201ENST00000449307 ZNF280BQ86YH2 543 aa12.71□□□□□ -0.37
AC006001.3-201ENST00000449307 OR5M3Q8NGP4 307 aa12.71□□□□□ -0.37
AC006001.3-201ENST00000449307 KCTD4Q8WVF5 259 aa12.71□□□□□ -0.37
AC006001.3-201ENST00000449307 ZHX1-C8orf76Q96EF9 292 aa12.71□□□□□ -0.37
AC006001.3-201ENST00000449307 CERS2Q96G23 380 aa12.71□□□□□ -0.37
AC006001.3-201ENST00000449307 CCDC177Q9NQR7 707 aaPredicted RBP12.71□□□□□ -0.37
AC006001.3-201ENST00000449307 MORF4L1Q9UBU8 362 aa12.71□□□□□ -0.37
AC006001.3-201ENST00000449307 ERBB2P04626 1255 aa12.71□□□□□ -0.38
AC006001.3-201ENST00000449307 SCRN3Q0VDG4 424 aa12.71□□□□□ -0.38
AC006001.3-201ENST00000449307 MSLNQ13421 630 aaPredicted RBP12.71□□□□□ -0.38
AC006001.3-201ENST00000449307 NAE1Q13564 534 aa12.71□□□□□ -0.38
AC006001.3-201ENST00000449307 TIGD5Q53EQ6 642 aa12.71□□□□□ -0.38
AC006001.3-201ENST00000449307 ANXA8L1Q5VT79 327 aa12.71□□□□□ -0.38
AC006001.3-201ENST00000449307 SLC8B1Q6J4K2 584 aa12.71□□□□□ -0.38
AC006001.3-201ENST00000449307 TRIM40Q6P9F5 258 aa12.71□□□□□ -0.38
AC006001.3-201ENST00000449307 KIAA0408Q6ZU52 694 aa12.71□□□□□ -0.38
AC006001.3-201ENST00000449307 CLHC1Q8NHS4 586 aa12.71□□□□□ -0.38
AC006001.3-201ENST00000449307 PLD4Q96BZ4 506 aa12.71□□□□□ -0.38
AC006001.3-201ENST00000449307 SEMA6AQ9H2E6 1030 aa12.71□□□□□ -0.38
AC006001.3-201ENST00000449307 MRPS7Q9Y2R9 242 aaKnown RBP12.71□□□□□ -0.38
AC006001.3-201ENST00000449307 POLR3HQ9Y535 204 aaPredicted RBP12.71□□□□□ -0.38
AC006001.3-201ENST00000449307 PSMD9O00233 223 aa12.71□□□□□ -0.38
AC006001.3-201ENST00000449307 B3GALT2O43825 422 aa12.71□□□□□ -0.38
AC006001.3-201ENST00000449307 HOXB2P14652 356 aa12.71□□□□□ -0.38
AC006001.3-201ENST00000449307 CDH4P55283 916 aa12.71□□□□□ -0.38
AC006001.3-201ENST00000449307 ATXN7L2Q5T6C5 722 aaPredicted RBP12.71□□□□□ -0.38
AC006001.3-201ENST00000449307 POU5F2Q8N7G0 328 aa12.71□□□□□ -0.38
AC006001.3-201ENST00000449307 OR7D4Q8NG98 312 aa12.71□□□□□ -0.38
AC006001.3-201ENST00000449307 EEF1AKMT1Q8WVE0 214 aa12.71□□□□□ -0.38
AC006001.3-201ENST00000449307 NCSTNQ92542 709 aa12.71□□□□□ -0.38
AC006001.3-201ENST00000449307 NUS1Q96E22 293 aa12.71□□□□□ -0.38
AC006001.3-201ENST00000449307 BTBD1Q9H0C5 482 aa12.71□□□□□ -0.38
AC006001.3-201ENST00000449307 RASSF1Q9NS23 344 aa12.71□□□□□ -0.38
AC006001.3-201ENST00000449307 IQGAP1P46940 1657 aa12.71□□□□□ -0.38
AC006001.3-201ENST00000449307 PDE9AO76083 593 aa12.7□□□□□ -0.38
AC006001.3-201ENST00000449307 CALB2P22676 271 aa12.7□□□□□ -0.38
AC006001.3-201ENST00000449307 WARSP23381 471 aaKnown RBP12.7□□□□□ -0.38
AC006001.3-201ENST00000449307 SVOPQ8N4V2 548 aa12.7□□□□□ -0.38
AC006001.3-201ENST00000449307 MAGEE2Q8TD90 523 aaPredicted RBP12.7□□□□□ -0.38
AC006001.3-201ENST00000449307 RNF157Q96PX1 679 aa12.7□□□□□ -0.38
AC006001.3-201ENST00000449307 NDC1Q9BTX1 674 aa12.7□□□□□ -0.38
AC006001.3-201ENST00000449307 MRPS30Q9NP92 439 aaKnown RBP12.7□□□□□ -0.38
AC006001.3-201ENST00000449307 CLN6Q9NWW5 311 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms