RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 DNPEPQ9ULA0 475 aa14.03□□□□□ -0.16
RTFDC1-204ENST00000449062 SLC17A4Q9Y2C5 497 aa14.03□□□□□ -0.16
RTFDC1-204ENST00000449062 ARHGEF17Q96PE2 2063 aaPredicted RBP14.02□□□□□ -0.16
RTFDC1-204ENST00000449062 LOC285095A0A1B0GVY8 99 aa14.02□□□□□ -0.17
RTFDC1-204ENST00000449062 PRSS38A1L453 326 aa14.02□□□□□ -0.17
RTFDC1-204ENST00000449062 CCDC66A2RUB6 948 aa14.02□□□□□ -0.17
RTFDC1-204ENST00000449062 RGSL1A5PLK6 1076 aa14.02□□□□□ -0.17
RTFDC1-204ENST00000449062 HACD1B0YJ81 288 aa14.02□□□□□ -0.17
RTFDC1-204ENST00000449062 CASC3O15234 703 aaKnown RBP14.02□□□□□ -0.17
RTFDC1-204ENST00000449062 MTSS1O43312 755 aa14.02□□□□□ -0.17
RTFDC1-204ENST00000449062 IPO7O95373 1038 aaKnown RBP14.02□□□□□ -0.17
RTFDC1-204ENST00000449062 MT-CYBP00156 380 aaPredicted RBP14.02□□□□□ -0.17
RTFDC1-204ENST00000449062 MT-CO3P00414 261 aa14.02□□□□□ -0.17
RTFDC1-204ENST00000449062 POLD2P49005 469 aa14.02□□□□□ -0.17
RTFDC1-204ENST00000449062 SPINT3P49223 89 aa14.02□□□□□ -0.17
RTFDC1-204ENST00000449062 PERM1Q5SV97 790 aa14.02□□□□□ -0.17
RTFDC1-204ENST00000449062 AADACL2Q6P093 401 aa14.02□□□□□ -0.17
RTFDC1-204ENST00000449062 KDELC1Q6UW63 502 aa14.02□□□□□ -0.17
RTFDC1-204ENST00000449062 TMC3Q7Z5M5 1100 aa14.02□□□□□ -0.17
RTFDC1-204ENST00000449062 ZC3H18Q86VM9 953 aaKnown RBP14.02□□□□□ -0.17
RTFDC1-204ENST00000449062 SFTPA2Q8IWL1 248 aa14.02□□□□□ -0.17
RTFDC1-204ENST00000449062 ZNF567Q8N184 647 aa14.02□□□□□ -0.17
RTFDC1-204ENST00000449062 GPR156Q8NFN8 814 aa14.02□□□□□ -0.17
RTFDC1-204ENST00000449062 CCL4L1Q8NHW4 92 aa14.02□□□□□ -0.17
RTFDC1-204ENST00000449062 GPBAR1Q8TDU6 330 aa14.02□□□□□ -0.17
RTFDC1-204ENST00000449062 AP2M1Q96CW1 435 aa14.02□□□□□ -0.17
RTFDC1-204ENST00000449062 QKIQ96PU8 341 aaKnown RBP eCLIP14.02□□□□□ -0.17
RTFDC1-204ENST00000449062 RIOK2Q9BVS4 552 aaKnown RBP14.02□□□□□ -0.17
RTFDC1-204ENST00000449062 ADGRE3Q9BY15 652 aa14.02□□□□□ -0.17
RTFDC1-204ENST00000449062 OSBPL8Q9BZF1 889 aa14.02□□□□□ -0.17
RTFDC1-204ENST00000449062 C10orf88Q9H8K7 445 aa14.02□□□□□ -0.17
RTFDC1-204ENST00000449062 MAGEE1Q9HCI5 957 aa14.02□□□□□ -0.17
RTFDC1-204ENST00000449062 CYP4F12Q9HCS2 524 aa14.02□□□□□ -0.17
RTFDC1-204ENST00000449062 PHPT1Q9NRX4 125 aaPredicted RBP14.02□□□□□ -0.17
RTFDC1-204ENST00000449062 PADI4Q9UM07 663 aa14.02□□□□□ -0.17
RTFDC1-204ENST00000449062 CPED1A4D0V7 1026 aa14.01□□□□□ -0.17
RTFDC1-204ENST00000449062 SRRM3A6NNA2 597 aaPredicted RBP14.01□□□□□ -0.17
RTFDC1-204ENST00000449062 DDX3YO15523 660 aaKnown RBP14.01□□□□□ -0.17
RTFDC1-204ENST00000449062 NOBOXO60393 691 aa14.01□□□□□ -0.17
RTFDC1-204ENST00000449062 KRT37O76014 449 aa14.01□□□□□ -0.17
RTFDC1-204ENST00000449062 EPOP01588 193 aa14.01□□□□□ -0.17
RTFDC1-204ENST00000449062 CTSEP14091 401 aa14.01□□□□□ -0.17
RTFDC1-204ENST00000449062 RWDD2BP57060 319 aa14.01□□□□□ -0.17
RTFDC1-204ENST00000449062 CYP4F3Q08477 520 aa14.01□□□□□ -0.17
RTFDC1-204ENST00000449062 KIF5AQ12840 1032 aa14.01□□□□□ -0.17
RTFDC1-204ENST00000449062 RTP5Q14D33 572 aa14.01□□□□□ -0.17
RTFDC1-204ENST00000449062 NOMO1Q15155 1222 aa14.01□□□□□ -0.17
RTFDC1-204ENST00000449062 NR0B2Q15466 257 aa14.01□□□□□ -0.17
RTFDC1-204ENST00000449062 HENMT1Q5T8I9 393 aaKnown RBP14.01□□□□□ -0.17
RTFDC1-204ENST00000449062 EFL1Q7Z2Z2 1120 aaKnown RBP14.01□□□□□ -0.17
RTFDC1-204ENST00000449062 KDELC2Q7Z4H8 507 aa14.01□□□□□ -0.17
RTFDC1-204ENST00000449062 C17orf82Q86X59 251 aaPredicted RBP14.01□□□□□ -0.17
RTFDC1-204ENST00000449062 PROSER1Q86XN7 944 aa14.01□□□□□ -0.17
RTFDC1-204ENST00000449062 GKN2Q86XP6 184 aa14.01□□□□□ -0.17
RTFDC1-204ENST00000449062 CCDC50Q8IVM0 306 aa14.01□□□□□ -0.17
RTFDC1-204ENST00000449062 MDM1Q8TC05 714 aa14.01□□□□□ -0.17
RTFDC1-204ENST00000449062 ACTL9Q8TC94 416 aa14.01□□□□□ -0.17
RTFDC1-204ENST00000449062 IFI44Q8TCB0 444 aa14.01□□□□□ -0.17
RTFDC1-204ENST00000449062 HTR3CQ8WXA8 447 aa14.01□□□□□ -0.17
RTFDC1-204ENST00000449062 ZCCHC14Q8WYQ9 949 aaKnown RBP14.01□□□□□ -0.17
RTFDC1-204ENST00000449062 HAUS1Q96CS2 278 aa14.01□□□□□ -0.17
RTFDC1-204ENST00000449062 OXNAD1Q96HP4 312 aaPredicted RBP14.01□□□□□ -0.17
RTFDC1-204ENST00000449062 FCRL5Q96RD9 977 aa14.01□□□□□ -0.17
RTFDC1-204ENST00000449062 VAT1Q99536 393 aa14.01□□□□□ -0.17
RTFDC1-204ENST00000449062 GORASP1Q9BQQ3 440 aa14.01□□□□□ -0.17
RTFDC1-204ENST00000449062 TRNAU1APQ9NX07 287 aaKnown RBP14.01□□□□□ -0.17
RTFDC1-204ENST00000449062 GPR34Q9UPC5 381 aa14.01□□□□□ -0.17
RTFDC1-204ENST00000449062 CLCA2Q9UQC9 943 aa14.01□□□□□ -0.17
RTFDC1-204ENST00000449062 ADGRG1Q9Y653 693 aa14.01□□□□□ -0.17
RTFDC1-204ENST00000449062 LRP4O75096 1905 aa14□□□□□ -0.17
RTFDC1-204ENST00000449062 C1orf232A0A0U1RR37 186 aa14□□□□□ -0.17
RTFDC1-204ENST00000449062 NDST3O95803 873 aa14□□□□□ -0.17
RTFDC1-204ENST00000449062 IVLP07476 585 aa14□□□□□ -0.17
RTFDC1-204ENST00000449062 PIRTP0C851 137 aa14□□□□□ -0.17
RTFDC1-204ENST00000449062 NFKB1P19838 968 aa14□□□□□ -0.17
RTFDC1-204ENST00000449062 RBL1P28749 1068 aa14□□□□□ -0.17
RTFDC1-204ENST00000449062 GPR1P46091 355 aa14□□□□□ -0.17
RTFDC1-204ENST00000449062 RPIAP49247 311 aa14□□□□□ -0.17
RTFDC1-204ENST00000449062 NAP1L1P55209 391 aaKnown RBP14□□□□□ -0.17
RTFDC1-204ENST00000449062 WNT3AP56704 352 aa14□□□□□ -0.17
RTFDC1-204ENST00000449062 GALNT3Q14435 633 aa14□□□□□ -0.17
RTFDC1-204ENST00000449062 TCEA2Q15560 299 aa14□□□□□ -0.17
RTFDC1-204ENST00000449062 RAET1GQ6H3X3 334 aa14□□□□□ -0.17
RTFDC1-204ENST00000449062 LYSMD3Q7Z3D4 306 aa14□□□□□ -0.17
RTFDC1-204ENST00000449062 KIAA1328Q86T90 577 aa14□□□□□ -0.17
RTFDC1-204ENST00000449062 RNF10Q8N5U6 811 aaKnown RBP14□□□□□ -0.17
RTFDC1-204ENST00000449062 ARL10Q8N8L6 244 aa14□□□□□ -0.17
RTFDC1-204ENST00000449062 GPR26Q8NDV2 337 aa14□□□□□ -0.17
RTFDC1-204ENST00000449062 SCG3Q8WXD2 468 aaKnown RBP14□□□□□ -0.17
RTFDC1-204ENST00000449062 HES6Q96HZ4 224 aa14□□□□□ -0.17
RTFDC1-204ENST00000449062 MRGPRX2Q96LB1 330 aa14□□□□□ -0.17
RTFDC1-204ENST00000449062 NRSN2Q9GZP1 204 aa14□□□□□ -0.17
RTFDC1-204ENST00000449062 FAM83DQ9H4H8 585 aa14□□□□□ -0.17
RTFDC1-204ENST00000449062 CCDC86Q9H6F5 360 aaKnown RBP14□□□□□ -0.17
RTFDC1-204ENST00000449062 SPATS2LQ9NUQ6 558 aaKnown RBP14□□□□□ -0.17
RTFDC1-204ENST00000449062 UBP1Q9NZI7 540 aa14□□□□□ -0.17
RTFDC1-204ENST00000449062 FAM153AQ9UHL3 310 aa14□□□□□ -0.17
RTFDC1-204ENST00000449062 RABGEF1Q9UJ41 708 aa14□□□□□ -0.17
RTFDC1-204ENST00000449062 TRHDEQ9UKU6 1024 aa14□□□□□ -0.17
RTFDC1-204ENST00000449062 SUFUQ9UMX1 484 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms