RNA–Protein interactions for RNA: ENST00000448238.2

NIPBL-202, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 1 (best) BASIC

Gene NIPBL, Length 8,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-202ENST00000448238 C20orf202A1L168 122 aa8.93□□□□□ -0.98
NIPBL-202ENST00000448238 HYKKA2RU49 373 aa8.93□□□□□ -0.98
NIPBL-202ENST00000448238 A8MXE2 369 aa8.93□□□□□ -0.98
NIPBL-202ENST00000448238 E7ESA3 106 aa8.93□□□□□ -0.98
NIPBL-202ENST00000448238 SCGB1D2O95969 90 aa8.93□□□□□ -0.98
NIPBL-202ENST00000448238 RAB4BP61018 213 aa8.93□□□□□ -0.98
NIPBL-202ENST00000448238 PLEKHG6Q3KR16 790 aa8.93□□□□□ -0.98
NIPBL-202ENST00000448238 MPPE1Q53F39 396 aa8.93□□□□□ -0.98
NIPBL-202ENST00000448238 N4BP2L1Q5TBK1 243 aaPredicted RBP8.93□□□□□ -0.98
NIPBL-202ENST00000448238 TAPT1Q6NXT6 567 aa8.93□□□□□ -0.98
NIPBL-202ENST00000448238 ZNF767PQ75MW2 155 aa8.93□□□□□ -0.98
NIPBL-202ENST00000448238 DENND1CQ8IV53 801 aa8.93□□□□□ -0.98
NIPBL-202ENST00000448238 ZSCAN1Q8NBB4 408 aa8.93□□□□□ -0.98
NIPBL-202ENST00000448238 OTUD7AQ8TE49 926 aaPredicted RBP8.93□□□□□ -0.98
NIPBL-202ENST00000448238 SLC41A3Q96GZ6 507 aa8.93□□□□□ -0.98
NIPBL-202ENST00000448238 TAS2R1Q9NYW7 299 aa8.93□□□□□ -0.98
NIPBL-202ENST00000448238 IFT140Q96RY7 1462 aa8.93□□□□□ -0.98
NIPBL-202ENST00000448238 LOC100509620A0A075B734 347 aa8.93□□□□□ -0.98
NIPBL-202ENST00000448238 ADAMDEC1O15204 470 aa8.93□□□□□ -0.98
NIPBL-202ENST00000448238 LILRB5O75023 590 aa8.93□□□□□ -0.98
NIPBL-202ENST00000448238 AMD1P17707 334 aa8.93□□□□□ -0.98
NIPBL-202ENST00000448238 OR2B6P58173 313 aa8.93□□□□□ -0.98
NIPBL-202ENST00000448238 SLC26A5P58743 744 aa8.93□□□□□ -0.98
NIPBL-202ENST00000448238 ZNF268Q14587 947 aaPredicted RBP8.93□□□□□ -0.98
NIPBL-202ENST00000448238 NUP54Q7Z3B4 507 aa8.93□□□□□ -0.98
NIPBL-202ENST00000448238 PLEKHA3Q9HB20 300 aa8.93□□□□□ -0.98
NIPBL-202ENST00000448238 UCKL1Q9NWZ5 548 aa8.93□□□□□ -0.98
NIPBL-202ENST00000448238 TMED5Q9Y3A6 229 aa8.93□□□□□ -0.98
NIPBL-202ENST00000448238 MED31Q9Y3C7 131 aa8.93□□□□□ -0.98
NIPBL-202ENST00000448238 NOX1Q9Y5S8 564 aa8.93□□□□□ -0.98
NIPBL-202ENST00000448238 OR6C70A6NIJ9 312 aa8.93□□□□□ -0.98
NIPBL-202ENST00000448238 PPEF1O14829 653 aaPredicted RBP8.93□□□□□ -0.98
NIPBL-202ENST00000448238 MICAL2O94851 1124 aa8.93□□□□□ -0.98
NIPBL-202ENST00000448238 SRGNP10124 158 aa8.93□□□□□ -0.98
NIPBL-202ENST00000448238 RPL21P46778 160 aaKnown RBP8.93□□□□□ -0.98
NIPBL-202ENST00000448238 FOLH1Q04609 750 aa8.93□□□□□ -0.98
NIPBL-202ENST00000448238 EIF2B1Q14232 305 aaKnown RBP8.93□□□□□ -0.98
NIPBL-202ENST00000448238 SEC23AQ15436 765 aa8.93□□□□□ -0.98
NIPBL-202ENST00000448238 AP5B1Q2VPB7 878 aa8.93□□□□□ -0.98
NIPBL-202ENST00000448238 PIWIL2Q8TC59 973 aaKnown RBP8.93□□□□□ -0.98
NIPBL-202ENST00000448238 RAET1EQ8TD07 263 aa8.93□□□□□ -0.98
NIPBL-202ENST00000448238 CCDC106Q9BWC9 280 aa8.93□□□□□ -0.98
NIPBL-202ENST00000448238 PCDH9Q9HC56 1237 aa8.93□□□□□ -0.98
NIPBL-202ENST00000448238 MCCC2Q9HCC0 563 aa8.93□□□□□ -0.98
NIPBL-202ENST00000448238 ZNF334Q9HCZ1 680 aaPredicted RBP8.93□□□□□ -0.98
NIPBL-202ENST00000448238 GTF3C4Q9UKN8 822 aa8.93□□□□□ -0.98
NIPBL-202ENST00000448238 NDUFB9Q9Y6M9 179 aa8.93□□□□□ -0.98
NIPBL-202ENST00000448238 LAMP2P13473 410 aa8.92□□□□□ -0.98
NIPBL-202ENST00000448238 IDH3GP51553 393 aaPredicted RBP8.92□□□□□ -0.98
NIPBL-202ENST00000448238 ALKBH2Q6NS38 261 aa8.92□□□□□ -0.98
NIPBL-202ENST00000448238 GLT6D1Q7Z4J2 308 aa8.92□□□□□ -0.98
NIPBL-202ENST00000448238 GTF3C2Q8WUA4 911 aaPredicted RBP8.92□□□□□ -0.98
NIPBL-202ENST00000448238 HOPXQ9BPY8 73 aaPredicted RBP8.92□□□□□ -0.98
NIPBL-202ENST00000448238 ZSWIM5Q9P217 1185 aa8.92□□□□□ -0.98
NIPBL-202ENST00000448238 SMARCA4P51532 1647 aa8.92□□□□□ -0.98
NIPBL-202ENST00000448238 C17orf113A0A1B0GUU1 675 aa8.92□□□□□ -0.98
NIPBL-202ENST00000448238 BCKDKO14874 412 aa8.92□□□□□ -0.98
NIPBL-202ENST00000448238 PDPK1O15530 556 aa8.92□□□□□ -0.98
NIPBL-202ENST00000448238 ATG12O94817 140 aa8.92□□□□□ -0.98
NIPBL-202ENST00000448238 TSPAN15O95858 294 aa8.92□□□□□ -0.98
NIPBL-202ENST00000448238 GH1P01241 217 aa8.92□□□□□ -0.98
NIPBL-202ENST00000448238 CSTBP04080 98 aaKnown RBP8.92□□□□□ -0.98
NIPBL-202ENST00000448238 ADD2P35612 726 aa8.92□□□□□ -0.98
NIPBL-202ENST00000448238 EEF1A1P68104 462 aaKnown RBP8.92□□□□□ -0.98
NIPBL-202ENST00000448238 RAB31Q13636 194 aa8.92□□□□□ -0.98
NIPBL-202ENST00000448238 EEF1A1P5Q5VTE0 462 aa8.92□□□□□ -0.98
NIPBL-202ENST00000448238 C11orf63Q6NUN7 778 aa8.92□□□□□ -0.98
NIPBL-202ENST00000448238 P2RY8Q86VZ1 359 aa8.92□□□□□ -0.98
NIPBL-202ENST00000448238 APOBEC3FQ8IUX4 373 aaKnown RBP8.92□□□□□ -0.98
NIPBL-202ENST00000448238 DAGLBQ8NCG7 672 aa8.92□□□□□ -0.98
NIPBL-202ENST00000448238 TPCN2Q8NHX9 752 aa8.92□□□□□ -0.98
NIPBL-202ENST00000448238 COQ8AQ8NI60 647 aa8.92□□□□□ -0.98
NIPBL-202ENST00000448238 PANX1Q96RD7 426 aa8.92□□□□□ -0.98
NIPBL-202ENST00000448238 GPATCH2Q9NW75 528 aa8.92□□□□□ -0.98
NIPBL-202ENST00000448238 SPTBP11277 2137 aa8.92□□□□□ -0.98
NIPBL-202ENST00000448238 KIAA0232Q92628 1395 aa8.92□□□□□ -0.98
NIPBL-202ENST00000448238 ISPDA4D126 451 aa8.92□□□□□ -0.98
NIPBL-202ENST00000448238 RFXANKO14593 260 aa8.92□□□□□ -0.98
NIPBL-202ENST00000448238 IFNA5P01569 189 aa8.92□□□□□ -0.98
NIPBL-202ENST00000448238 OR1G1P47890 313 aa8.92□□□□□ -0.98
NIPBL-202ENST00000448238 HERV-K104P61576 105 aa8.92□□□□□ -0.98
NIPBL-202ENST00000448238 SLC20A2Q08357 652 aa8.92□□□□□ -0.98
NIPBL-202ENST00000448238 NKAPQ8N5F7 415 aaKnown RBP8.92□□□□□ -0.98
NIPBL-202ENST00000448238 KCNN1Q92952 543 aa8.92□□□□□ -0.98
NIPBL-202ENST00000448238 HERC2P3Q9BVR0 1158 aa8.92□□□□□ -0.98
NIPBL-202ENST00000448238 IL22Q9GZX6 179 aa8.92□□□□□ -0.98
NIPBL-202ENST00000448238 HIPK3Q9H422 1215 aa8.92□□□□□ -0.98
NIPBL-202ENST00000448238 BTN3A1O00481 513 aa8.92□□□□□ -0.98
NIPBL-202ENST00000448238 HOXB9P17482 250 aaPredicted RBP8.92□□□□□ -0.98
NIPBL-202ENST00000448238 CDKN2CP42773 168 aa8.92□□□□□ -0.98
NIPBL-202ENST00000448238 S100A10P60903 97 aa8.92□□□□□ -0.98
NIPBL-202ENST00000448238 CRADDP78560 199 aa8.92□□□□□ -0.98
NIPBL-202ENST00000448238 DUSP4Q13115 394 aa8.92□□□□□ -0.98
NIPBL-202ENST00000448238 ZNF460Q14592 562 aa8.92□□□□□ -0.98
NIPBL-202ENST00000448238 C4orf17Q53FE4 359 aa8.92□□□□□ -0.98
NIPBL-202ENST00000448238 PPP1R15BQ5SWA1 713 aa8.92□□□□□ -0.98
NIPBL-202ENST00000448238 DCST1Q5T197 706 aa8.92□□□□□ -0.98
NIPBL-202ENST00000448238 YTHDF3Q7Z739 585 aaKnown RBP8.92□□□□□ -0.98
NIPBL-202ENST00000448238 METTL3Q86U44 580 aaKnown RBP8.92□□□□□ -0.98
NIPBL-202ENST00000448238 SERPINB11Q96P15 392 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms