RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 LRRC14BA6NHZ5 514 aa7.77□□□□□ -1.17
NEDD9-204ENST00000448183 WNT10BO00744 389 aa7.77□□□□□ -1.17
NEDD9-204ENST00000448183 FAM155BO75949 473 aa7.77□□□□□ -1.17
NEDD9-204ENST00000448183 LYPLA2O95372 231 aa7.77□□□□□ -1.17
NEDD9-204ENST00000448183 CCNYL3P0C7X3 344 aa7.77□□□□□ -1.17
NEDD9-204ENST00000448183 ITGB5P18084 799 aa7.77□□□□□ -1.17
NEDD9-204ENST00000448183 PTPRAP18433 802 aa7.77□□□□□ -1.17
NEDD9-204ENST00000448183 PAX3P23760 479 aa7.77□□□□□ -1.17
NEDD9-204ENST00000448183 PSMA1P25786 263 aaKnown RBP7.77□□□□□ -1.17
NEDD9-204ENST00000448183 PEX2P28328 305 aa7.77□□□□□ -1.17
NEDD9-204ENST00000448183 ADCYAP1R1P41586 468 aa7.77□□□□□ -1.17
NEDD9-204ENST00000448183 ENPEPQ07075 957 aa7.77□□□□□ -1.17
NEDD9-204ENST00000448183 ELP6Q0PNE2 266 aa7.77□□□□□ -1.17
NEDD9-204ENST00000448183 AP5B1Q2VPB7 878 aa7.77□□□□□ -1.17
NEDD9-204ENST00000448183 ARL13AQ5H913 290 aaPredicted RBP7.77□□□□□ -1.17
NEDD9-204ENST00000448183 PPP1R26Q5T8A7 1209 aaPredicted RBP7.77□□□□□ -1.17
NEDD9-204ENST00000448183 TPGS1Q6ZTW0 290 aa7.77□□□□□ -1.17
NEDD9-204ENST00000448183 METTL3Q86U44 580 aaKnown RBP7.77□□□□□ -1.17
NEDD9-204ENST00000448183 TCAIMQ8N3R3 496 aa7.77□□□□□ -1.17
NEDD9-204ENST00000448183 MEIOBQ8N635 442 aa7.77□□□□□ -1.17
NEDD9-204ENST00000448183 C4orf32Q8N8J7 132 aa7.77□□□□□ -1.17
NEDD9-204ENST00000448183 ARL10Q8N8L6 244 aa7.77□□□□□ -1.17
NEDD9-204ENST00000448183 C12orf29Q8N999 325 aa7.77□□□□□ -1.17
NEDD9-204ENST00000448183 C12orf50Q8NA57 414 aaPredicted RBP7.77□□□□□ -1.17
NEDD9-204ENST00000448183 TSSK3Q96PN8 268 aa7.77□□□□□ -1.17
NEDD9-204ENST00000448183 CSPG4P5Q96PW8 444 aa7.77□□□□□ -1.17
NEDD9-204ENST00000448183 CADM1Q9BY67 442 aaKnown RBP7.77□□□□□ -1.17
NEDD9-204ENST00000448183 RASSF1Q9NS23 344 aa7.77□□□□□ -1.17
NEDD9-204ENST00000448183 THG1LQ9NWX6 298 aaKnown RBP7.77□□□□□ -1.17
NEDD9-204ENST00000448183 CCDC59Q9P031 241 aaKnown RBP7.77□□□□□ -1.17
NEDD9-204ENST00000448183 IFT80Q9P2H3 777 aaPredicted RBP7.77□□□□□ -1.17
NEDD9-204ENST00000448183 FBXO10Q9UK96 956 aa7.77□□□□□ -1.17
NEDD9-204ENST00000448183 ARHGAP23Q9P227 1491 aa7.77□□□□□ -1.17
NEDD9-204ENST00000448183 NRCAMQ92823 1304 aa7.77□□□□□ -1.17
NEDD9-204ENST00000448183 A0A1W2PRG6 482 aa7.77□□□□□ -1.17
NEDD9-204ENST00000448183 ARHGEF33A8MVX0 844 aa7.77□□□□□ -1.17
NEDD9-204ENST00000448183 KCNU1A8MYU2 1149 aa7.77□□□□□ -1.17
NEDD9-204ENST00000448183 CLDN25C9JDP6 229 aa7.77□□□□□ -1.17
NEDD9-204ENST00000448183 OR5F1O95221 314 aa7.77□□□□□ -1.17
NEDD9-204ENST00000448183 POLR2JP52435 117 aaKnown RBP7.77□□□□□ -1.17
NEDD9-204ENST00000448183 PTPN5P54829 565 aa7.77□□□□□ -1.17
NEDD9-204ENST00000448183 FKBP1AP62942 108 aaKnown RBP7.77□□□□□ -1.17
NEDD9-204ENST00000448183 PPP1R15BQ5SWA1 713 aa7.77□□□□□ -1.17
NEDD9-204ENST00000448183 LLGL2Q6P1M3 1020 aa7.77□□□□□ -1.17
NEDD9-204ENST00000448183 CCDC185Q8N715 623 aa7.77□□□□□ -1.17
NEDD9-204ENST00000448183 TRPV1Q8NER1 839 aa7.77□□□□□ -1.17
NEDD9-204ENST00000448183 PPCDCQ96CD2 204 aa7.77□□□□□ -1.17
NEDD9-204ENST00000448183 PPP1R16AQ96I34 528 aa7.77□□□□□ -1.17
NEDD9-204ENST00000448183 AGO1Q9UL18 857 aaKnown RBP7.77□□□□□ -1.17
NEDD9-204ENST00000448183 RAB23Q9ULC3 237 aa7.77□□□□□ -1.17
NEDD9-204ENST00000448183 DGKBQ9Y6T7 804 aa7.77□□□□□ -1.17
NEDD9-204ENST00000448183 KIF1AQ12756 1690 aa7.76□□□□□ -1.17
NEDD9-204ENST00000448183 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.76□□□□□ -1.17
NEDD9-204ENST00000448183 PDHXO00330 501 aa7.76□□□□□ -1.17
NEDD9-204ENST00000448183 WNT7AO00755 349 aa7.76□□□□□ -1.17
NEDD9-204ENST00000448183 PLIN3O60664 434 aa7.76□□□□□ -1.17
NEDD9-204ENST00000448183 ERAL1O75616 437 aaKnown RBP7.76□□□□□ -1.17
NEDD9-204ENST00000448183 NOL4O94818 638 aa7.76□□□□□ -1.17
NEDD9-204ENST00000448183 KLRC2P26717 231 aa7.76□□□□□ -1.17
NEDD9-204ENST00000448183 MC4RP32245 332 aa7.76□□□□□ -1.17
NEDD9-204ENST00000448183 ADRA1BP35368 520 aa7.76□□□□□ -1.17
NEDD9-204ENST00000448183 BUD31P41223 144 aaPredicted RBP7.76□□□□□ -1.17
NEDD9-204ENST00000448183 KIR3DL1P43629 444 aa7.76□□□□□ -1.17
NEDD9-204ENST00000448183 MAPK9P45984 424 aa7.76□□□□□ -1.17
NEDD9-204ENST00000448183 NRG1Q02297 640 aaPredicted RBP7.76□□□□□ -1.17
NEDD9-204ENST00000448183 BTG3Q14201 252 aaPredicted RBP7.76□□□□□ -1.17
NEDD9-204ENST00000448183 ECM1Q16610 540 aa7.76□□□□□ -1.17
NEDD9-204ENST00000448183 FNDC3BQ53EP0 1204 aaKnown RBP7.76□□□□□ -1.17
NEDD9-204ENST00000448183 EEF1DP3Q658K8 133 aa7.76□□□□□ -1.17
NEDD9-204ENST00000448183 DEFB128Q7Z7B8 93 aa7.76□□□□□ -1.17
NEDD9-204ENST00000448183 GRIN3AQ8TCU5 1115 aa7.76□□□□□ -1.17
NEDD9-204ENST00000448183 SUSD6Q92537 303 aa7.76□□□□□ -1.17
NEDD9-204ENST00000448183 TNFRSF25Q93038 417 aa7.76□□□□□ -1.17
NEDD9-204ENST00000448183 FCRL2Q96LA5 508 aaPredicted RBP7.76□□□□□ -1.17
NEDD9-204ENST00000448183 UROC1Q96N76 676 aa7.76□□□□□ -1.17
NEDD9-204ENST00000448183 DUSP16Q9BY84 665 aa7.76□□□□□ -1.17
NEDD9-204ENST00000448183 ABCG8Q9H221 673 aa7.76□□□□□ -1.17
NEDD9-204ENST00000448183 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.76□□□□□ -1.17
NEDD9-204ENST00000448183 DNAJA2O60884 412 aa7.76□□□□□ -1.17
NEDD9-204ENST00000448183 LRCH4O75427 683 aa7.76□□□□□ -1.17
NEDD9-204ENST00000448183 ZNF12P17014 697 aa7.76□□□□□ -1.17
NEDD9-204ENST00000448183 FAUP35544 74 aaKnown RBP7.76□□□□□ -1.17
NEDD9-204ENST00000448183 CDKN2BP42772 138 aa7.76□□□□□ -1.17
NEDD9-204ENST00000448183 LIMK2P53671 638 aa7.76□□□□□ -1.17
NEDD9-204ENST00000448183 LIPEQ05469 1076 aa7.76□□□□□ -1.17
NEDD9-204ENST00000448183 FASTKD3Q14CZ7 662 aaKnown RBP7.76□□□□□ -1.17
NEDD9-204ENST00000448183 CPTPQ5TA50 214 aa7.76□□□□□ -1.17
NEDD9-204ENST00000448183 HECTD2Q5U5R9 776 aa7.76□□□□□ -1.17
NEDD9-204ENST00000448183 RPTNQ6XPR3 784 aa7.76□□□□□ -1.17
NEDD9-204ENST00000448183 AGMOQ6ZNB7 445 aa7.76□□□□□ -1.17
NEDD9-204ENST00000448183 PIGWQ7Z7B1 504 aa7.76□□□□□ -1.17
NEDD9-204ENST00000448183 FAM35AQ86V20 835 aa7.76□□□□□ -1.17
NEDD9-204ENST00000448183 CCDC36Q8IYA8 594 aa7.76□□□□□ -1.17
NEDD9-204ENST00000448183 PLD5Q8N7P1 536 aa7.76□□□□□ -1.17
NEDD9-204ENST00000448183 CLP1Q92989 425 aaKnown RBP7.76□□□□□ -1.17
NEDD9-204ENST00000448183 AKT1S1Q96B36 256 aa7.76□□□□□ -1.17
NEDD9-204ENST00000448183 EXOC2Q96KP1 924 aa7.76□□□□□ -1.17
NEDD9-204ENST00000448183 NXF3Q9H4D5 531 aaKnown RBP7.76□□□□□ -1.17
NEDD9-204ENST00000448183 GBA2Q9HCG7 927 aaPredicted RBP7.76□□□□□ -1.17
NEDD9-204ENST00000448183 PDP1Q9P0J1 537 aaPredicted RBP7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms