RNA–Protein interactions for RNA: ENST00000447784.1

LINC00408-201, long intergenic non-protein coding RNA 408, humanhuman

TSL 5 BASIC

Gene LINC00408, Length 560 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00408-201ENST00000447784 RHOXF2Q9BQY4 288 aa11.57□□□□□ -0.56
LINC00408-201ENST00000447784 CDH19Q9H159 772 aa11.57□□□□□ -0.56
LINC00408-201ENST00000447784 FAM83DQ9H4H8 585 aa11.57□□□□□ -0.56
LINC00408-201ENST00000447784 ZFR2Q9UPR6 939 aaKnown RBP11.57□□□□□ -0.56
LINC00408-201ENST00000447784 A0A0U1RQS6 177 aa11.56□□□□□ -0.56
LINC00408-201ENST00000447784 A0A1W2PPC4 97 aa11.56□□□□□ -0.56
LINC00408-201ENST00000447784 ESYT3A0FGR9 886 aa11.56□□□□□ -0.56
LINC00408-201ENST00000447784 FPGTO14772 594 aa11.56□□□□□ -0.56
LINC00408-201ENST00000447784 AURKAO14965 403 aa11.56□□□□□ -0.56
LINC00408-201ENST00000447784 BCAT2O15382 392 aaPredicted RBP11.56□□□□□ -0.56
LINC00408-201ENST00000447784 LATO43561 262 aa11.56□□□□□ -0.56
LINC00408-201ENST00000447784 PPFIA2O75334 1257 aa11.56□□□□□ -0.56
LINC00408-201ENST00000447784 AVILO75366 819 aa11.56□□□□□ -0.56
LINC00408-201ENST00000447784 IGHV4-34P06331 123 aa11.56□□□□□ -0.56
LINC00408-201ENST00000447784 HNRNPA2B1P22626 353 aaKnown RBP11.56□□□□□ -0.56
LINC00408-201ENST00000447784 MGAT1P26572 445 aa11.56□□□□□ -0.56
LINC00408-201ENST00000447784 HMGCLP35914 325 aa11.56□□□□□ -0.56
LINC00408-201ENST00000447784 HADHAP40939 763 aa11.56□□□□□ -0.56
LINC00408-201ENST00000447784 ETV3P41162 512 aa11.56□□□□□ -0.56
LINC00408-201ENST00000447784 MTM1Q13496 603 aa11.56□□□□□ -0.56
LINC00408-201ENST00000447784 CKAP5Q14008 2032 aa11.56□□□□□ -0.56
LINC00408-201ENST00000447784 HLTFQ14527 1009 aaKnown RBP eCLIP11.56□□□□□ -0.56
LINC00408-201ENST00000447784 HIF1AQ16665 826 aa11.56□□□□□ -0.56
LINC00408-201ENST00000447784 CDKN3Q16667 212 aa11.56□□□□□ -0.56
LINC00408-201ENST00000447784 ARMC3Q5W041 872 aa11.56□□□□□ -0.56
LINC00408-201ENST00000447784 CEP128Q6ZU80 1094 aa11.56□□□□□ -0.56
LINC00408-201ENST00000447784 Q6ZVL8 140 aa11.56□□□□□ -0.56
LINC00408-201ENST00000447784 CENPUQ71F23 418 aa11.56□□□□□ -0.56
LINC00408-201ENST00000447784 UBXN4Q92575 508 aa11.56□□□□□ -0.56
LINC00408-201ENST00000447784 AP2M1Q96CW1 435 aa11.56□□□□□ -0.56
LINC00408-201ENST00000447784 COQ10AQ96MF6 247 aa11.56□□□□□ -0.56
LINC00408-201ENST00000447784 RANBP9Q96S59 729 aa11.56□□□□□ -0.56
LINC00408-201ENST00000447784 AASDHPPTQ9NRN7 309 aa11.56□□□□□ -0.56
LINC00408-201ENST00000447784 DNAAF2Q9NVR5 837 aaKnown RBP11.56□□□□□ -0.56
LINC00408-201ENST00000447784 MTRF1LQ9UGC7 380 aaKnown RBP11.56□□□□□ -0.56
LINC00408-201ENST00000447784 EIF2B4Q9UI10 523 aaKnown RBP11.56□□□□□ -0.56
LINC00408-201ENST00000447784 FNDC3AQ9Y2H6 1198 aaKnown RBP11.56□□□□□ -0.56
LINC00408-201ENST00000447784 COQ6Q9Y2Z9 468 aa11.56□□□□□ -0.56
LINC00408-201ENST00000447784 ARL5AQ9Y689 179 aa11.56□□□□□ -0.56
LINC00408-201ENST00000447784 MAD1L1Q9Y6D9 718 aa11.56□□□□□ -0.56
LINC00408-201ENST00000447784 DOCK4Q8N1I0 1966 aa11.56□□□□□ -0.56
LINC00408-201ENST00000447784 MED19A0JLT2 244 aaPredicted RBP11.55□□□□□ -0.56
LINC00408-201ENST00000447784 BUD23O43709 281 aaKnown RBP11.55□□□□□ -0.56
LINC00408-201ENST00000447784 PYGLP06737 847 aa11.55□□□□□ -0.56
LINC00408-201ENST00000447784 C1SP09871 688 aa11.55□□□□□ -0.56
LINC00408-201ENST00000447784 CSRP1P21291 193 aaKnown RBP11.55□□□□□ -0.56
LINC00408-201ENST00000447784 SPAM1P38567 509 aa11.55□□□□□ -0.56
LINC00408-201ENST00000447784 SPINT3P49223 89 aa11.55□□□□□ -0.56
LINC00408-201ENST00000447784 AFF3P51826 1226 aaKnown RBP11.55□□□□□ -0.56
LINC00408-201ENST00000447784 SLC14A1Q13336 389 aa11.55□□□□□ -0.56
LINC00408-201ENST00000447784 TEAD4Q15561 434 aa11.55□□□□□ -0.56
LINC00408-201ENST00000447784 BBS9Q3SYG4 887 aa11.55□□□□□ -0.56
LINC00408-201ENST00000447784 CCDC38Q502W7 563 aa11.55□□□□□ -0.56
LINC00408-201ENST00000447784 PPM1JQ5JR12 505 aa11.55□□□□□ -0.56
LINC00408-201ENST00000447784 ALS2CLQ60I27 953 aa11.55□□□□□ -0.56
LINC00408-201ENST00000447784 CAND1Q86VP6 1230 aaKnown RBP11.55□□□□□ -0.56
LINC00408-201ENST00000447784 ABCA7Q8IZY2 2146 aa11.55□□□□□ -0.56
LINC00408-201ENST00000447784 TTC30BQ8N4P2 665 aa11.55□□□□□ -0.56
LINC00408-201ENST00000447784 ZCCHC9Q8N567 271 aaKnown RBP11.55□□□□□ -0.56
LINC00408-201ENST00000447784 MINDY1Q8N5J2 469 aa11.55□□□□□ -0.56
LINC00408-201ENST00000447784 DENND6BQ8NEG7 585 aa11.55□□□□□ -0.56
LINC00408-201ENST00000447784 OR4K2Q8NGD2 314 aa11.55□□□□□ -0.56
LINC00408-201ENST00000447784 STYXQ8WUJ0 223 aa11.55□□□□□ -0.56
LINC00408-201ENST00000447784 PTCD2Q8WV60 388 aaKnown RBP11.55□□□□□ -0.56
LINC00408-201ENST00000447784 ART4Q93070 314 aa11.55□□□□□ -0.56
LINC00408-201ENST00000447784 STAMBPL1Q96FJ0 436 aa11.55□□□□□ -0.56
LINC00408-201ENST00000447784 DTD2Q96FN9 168 aa11.55□□□□□ -0.56
LINC00408-201ENST00000447784 LENG8Q96PV6 779 aaPredicted RBP11.55□□□□□ -0.56
LINC00408-201ENST00000447784 MYOCQ99972 504 aa11.55□□□□□ -0.56
LINC00408-201ENST00000447784 FAM129AQ9BZQ8 928 aa11.55□□□□□ -0.56
LINC00408-201ENST00000447784 FOXP3Q9BZS1 431 aa11.55□□□□□ -0.56
LINC00408-201ENST00000447784 TSPYL1Q9H0U9 437 aa11.55□□□□□ -0.56
LINC00408-201ENST00000447784 BPIFA1Q9NP55 256 aa11.55□□□□□ -0.56
LINC00408-201ENST00000447784 CD84Q9UIB8 345 aa11.55□□□□□ -0.56
LINC00408-201ENST00000447784 TCAF1Q9Y4C2 921 aa11.55□□□□□ -0.56
LINC00408-201ENST00000447784 NYNRINQ9P2P1 1898 aaKnown RBP11.55□□□□□ -0.56
LINC00408-201ENST00000447784 GLYATL1P3A0A0U1RQE8 302 aa11.54□□□□□ -0.56
LINC00408-201ENST00000447784 CCDC78A2IDD5 438 aa11.54□□□□□ -0.56
LINC00408-201ENST00000447784 LDB2O43679 373 aa11.54□□□□□ -0.56
LINC00408-201ENST00000447784 MAGEC1O60732 1142 aa11.54□□□□□ -0.56
LINC00408-201ENST00000447784 PCCBP05166 539 aa11.54□□□□□ -0.56
LINC00408-201ENST00000447784 PAMP19021 973 aa11.54□□□□□ -0.56
LINC00408-201ENST00000447784 GPR1P46091 355 aa11.54□□□□□ -0.56
LINC00408-201ENST00000447784 RACK1P63244 317 aaKnown RBP11.54□□□□□ -0.56
LINC00408-201ENST00000447784 CRADDP78560 199 aa11.54□□□□□ -0.56
LINC00408-201ENST00000447784 TMPRSS15P98073 1019 aa11.54□□□□□ -0.56
LINC00408-201ENST00000447784 GRIK2Q13002 908 aa11.54□□□□□ -0.56
LINC00408-201ENST00000447784 CUL1Q13616 776 aa11.54□□□□□ -0.56
LINC00408-201ENST00000447784 FGL2Q14314 439 aa11.54□□□□□ -0.56
LINC00408-201ENST00000447784 AGERQ15109 404 aa11.54□□□□□ -0.56
LINC00408-201ENST00000447784 WSCD2Q2TBF2 565 aa11.54□□□□□ -0.56
LINC00408-201ENST00000447784 TSTD2Q5T7W7 516 aa11.54□□□□□ -0.56
LINC00408-201ENST00000447784 RAET1GQ6H3X3 334 aa11.54□□□□□ -0.56
LINC00408-201ENST00000447784 IL27RAQ6UWB1 636 aa11.54□□□□□ -0.56
LINC00408-201ENST00000447784 ZNF534Q76KX8 674 aa11.54□□□□□ -0.56
LINC00408-201ENST00000447784 ZNF765Q7L2R6 523 aa11.54□□□□□ -0.56
LINC00408-201ENST00000447784 TECPR1Q7Z6L1 1165 aa11.54□□□□□ -0.56
LINC00408-201ENST00000447784 CCNJLQ8IV13 435 aa11.54□□□□□ -0.56
LINC00408-201ENST00000447784 CBARPQ8N350 705 aaPredicted RBP11.54□□□□□ -0.56
LINC00408-201ENST00000447784 FAM174AQ8TBP5 190 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms