RNA–Protein interactions for RNA: ENST00000447669.6

RFFL-206, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 2,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-206ENST00000447669 SNX15Q9NRS6 342 aa24.81■■□□□ 1.56
RFFL-206ENST00000447669 NDRG2Q9UN36 371 aaKnown RBP24.81■■□□□ 1.56
RFFL-206ENST00000447669 OR1I1O60431 355 aa24.8■■□□□ 1.56
RFFL-206ENST00000447669 SRFP11831 508 aa24.8■■□□□ 1.56
RFFL-206ENST00000447669 COL9A1P20849 921 aa24.8■■□□□ 1.56
RFFL-206ENST00000447669 ITGB7P26010 798 aa24.8■■□□□ 1.56
RFFL-206ENST00000447669 FBXL19Q6PCT2 694 aa24.8■■□□□ 1.56
RFFL-206ENST00000447669 TAS2R42Q7RTR8 314 aa24.8■■□□□ 1.56
RFFL-206ENST00000447669 MAFAQ8NHW3 353 aaPredicted RBP24.8■■□□□ 1.56
RFFL-206ENST00000447669 MTBPQ96DY7 904 aa24.8■■□□□ 1.56
RFFL-206ENST00000447669 NSMCE4AQ9NXX6 385 aa24.8■■□□□ 1.56
RFFL-206ENST00000447669 SLC17A7Q9P2U7 560 aa24.8■■□□□ 1.56
RFFL-206ENST00000447669 FAM95CA0A1B0GW59 222 aa24.79■■□□□ 1.56
RFFL-206ENST00000447669 A0A1W2PQ67 120 aa24.79■■□□□ 1.56
RFFL-206ENST00000447669 MID1O15344 667 aa24.79■■□□□ 1.56
RFFL-206ENST00000447669 PRAMEF1O95521 474 aa24.79■■□□□ 1.56
RFFL-206ENST00000447669 CNTFP26441 200 aa24.79■■□□□ 1.56
RFFL-206ENST00000447669 NTSR1P30989 418 aa24.79■■□□□ 1.56
RFFL-206ENST00000447669 VIPR1P32241 457 aa24.79■■□□□ 1.56
RFFL-206ENST00000447669 SATB1Q01826 763 aa24.79■■□□□ 1.56
RFFL-206ENST00000447669 PDE1CQ14123 709 aaPredicted RBP24.79■■□□□ 1.56
RFFL-206ENST00000447669 ARHGEF7Q14155 803 aa24.79■■□□□ 1.56
RFFL-206ENST00000447669 CHRNA6Q15825 494 aa24.79■■□□□ 1.56
RFFL-206ENST00000447669 MRNIPQ6NTE8 343 aa24.79■■□□□ 1.56
RFFL-206ENST00000447669 CEP97Q8IW35 865 aa24.79■■□□□ 1.56
RFFL-206ENST00000447669 GPR150Q8NGU9 434 aa24.79■■□□□ 1.56
RFFL-206ENST00000447669 FAM3CQ92520 227 aa24.79■■□□□ 1.56
RFFL-206ENST00000447669 FAM136AQ96C01 138 aa24.79■■□□□ 1.56
RFFL-206ENST00000447669 ELMO2Q96JJ3 720 aa24.79■■□□□ 1.56
RFFL-206ENST00000447669 GPR22Q99680 433 aa24.79■■□□□ 1.56
RFFL-206ENST00000447669 MKRN2Q9H000 416 aaKnown RBP24.79■■□□□ 1.56
RFFL-206ENST00000447669 CA14Q9ULX7 337 aa24.79■■□□□ 1.56
RFFL-206ENST00000447669 COQ6Q9Y2Z9 468 aa24.79■■□□□ 1.56
RFFL-206ENST00000447669 H7C0S8 307 aa24.79■■□□□ 1.56
RFFL-206ENST00000447669 PHGDHO43175 533 aaKnown RBP24.79■■□□□ 1.56
RFFL-206ENST00000447669 SYNCRIPO60506 623 aaKnown RBP24.79■■□□□ 1.56
RFFL-206ENST00000447669 DNAJC6O75061 913 aa24.79■■□□□ 1.56
RFFL-206ENST00000447669 SRP72O76094 671 aaKnown RBP24.79■■□□□ 1.56
RFFL-206ENST00000447669 PMLP29590 882 aa24.79■■□□□ 1.56
RFFL-206ENST00000447669 TYK2P29597 1187 aa24.79■■□□□ 1.56
RFFL-206ENST00000447669 ETV3P41162 512 aa24.79■■□□□ 1.56
RFFL-206ENST00000447669 SLC18A2Q05940 514 aa24.79■■□□□ 1.56
RFFL-206ENST00000447669 CNTN1Q12860 1018 aa24.79■■□□□ 1.56
RFFL-206ENST00000447669 CAMK2GQ13555 558 aaPredicted RBP24.79■■□□□ 1.56
RFFL-206ENST00000447669 TCP10LQ8TDR4 215 aa24.79■■□□□ 1.56
RFFL-206ENST00000447669 SENP1Q9P0U3 644 aa24.79■■□□□ 1.56
RFFL-206ENST00000447669 SERGEFQ9UGK8 458 aa24.79■■□□□ 1.56
RFFL-206ENST00000447669 DOCK9Q9BZ29 2069 aa24.79■■□□□ 1.56
RFFL-206ENST00000447669 NUMA1Q14980 2115 aa24.79■■□□□ 1.56
RFFL-206ENST00000447669 ADRB3P13945 408 aa24.78■■□□□ 1.56
RFFL-206ENST00000447669 MMP12P39900 470 aa24.78■■□□□ 1.56
RFFL-206ENST00000447669 STC1P52823 247 aa24.78■■□□□ 1.56
RFFL-206ENST00000447669 IRF9Q00978 393 aa24.78■■□□□ 1.56
RFFL-206ENST00000447669 USP10Q14694 798 aaKnown RBP24.78■■□□□ 1.56
RFFL-206ENST00000447669 ZNF549Q6P9A3 640 aa24.78■■□□□ 1.56
RFFL-206ENST00000447669 TIFABQ6ZNK6 161 aa24.78■■□□□ 1.56
RFFL-206ENST00000447669 KIAA0408Q6ZU52 694 aa24.78■■□□□ 1.56
RFFL-206ENST00000447669 Q6ZVL8 140 aa24.78■■□□□ 1.56
RFFL-206ENST00000447669 AADATQ8N5Z0 425 aa24.78■■□□□ 1.56
RFFL-206ENST00000447669 SCAMP4Q969E2 229 aa24.78■■□□□ 1.56
RFFL-206ENST00000447669 OMDQ99983 421 aa24.78■■□□□ 1.56
RFFL-206ENST00000447669 VPS11Q9H270 941 aa24.78■■□□□ 1.56
RFFL-206ENST00000447669 ZNF358Q9NW07 568 aa24.78■■□□□ 1.56
RFFL-206ENST00000447669 ZNF106Q9H2Y7 1883 aaKnown RBP24.78■■□□□ 1.56
RFFL-206ENST00000447669 CYP2A6P11509 494 aaPredicted RBP24.78■■□□□ 1.56
RFFL-206ENST00000447669 DRD1P21728 446 aa24.78■■□□□ 1.56
RFFL-206ENST00000447669 P2RY2P41231 377 aa24.78■■□□□ 1.56
RFFL-206ENST00000447669 COPAP53621 1224 aa24.78■■□□□ 1.56
RFFL-206ENST00000447669 RPLP0P6Q8NHW5 317 aa24.78■■□□□ 1.56
RFFL-206ENST00000447669 GDAP1Q8TB36 358 aa24.78■■□□□ 1.56
RFFL-206ENST00000447669 PKNOX2Q96KN3 472 aa24.78■■□□□ 1.56
RFFL-206ENST00000447669 OLFM1Q99784 485 aa24.78■■□□□ 1.56
RFFL-206ENST00000447669 SLC30A1Q9Y6M5 507 aa24.78■■□□□ 1.56
RFFL-206ENST00000447669 GLYATL1P3A0A0U1RQE8 302 aa24.77■■□□□ 1.56
RFFL-206ENST00000447669 A0A1W2PQF6 199 aa24.77■■□□□ 1.56
RFFL-206ENST00000447669 UBA6A0AVT1 1052 aaPredicted RBP24.77■■□□□ 1.56
RFFL-206ENST00000447669 FAM47DPA6NHR8 397 aa24.77■■□□□ 1.56
RFFL-206ENST00000447669 DRD3P35462 400 aa24.77■■□□□ 1.56
RFFL-206ENST00000447669 SPINT3P49223 89 aa24.77■■□□□ 1.56
RFFL-206ENST00000447669 TAS2R39P59534 338 aa24.77■■□□□ 1.56
RFFL-206ENST00000447669 PFKPQ01813 784 aa24.77■■□□□ 1.56
RFFL-206ENST00000447669 DPPA4Q7L190 304 aa24.77■■□□□ 1.56
RFFL-206ENST00000447669 SDCCAG8Q86SQ7 713 aaPredicted RBP24.77■■□□□ 1.56
RFFL-206ENST00000447669 SRPK1Q96SB4 655 aaKnown RBP24.77■■□□□ 1.56
RFFL-206ENST00000447669 RSPH9Q9H1X1 276 aaPredicted RBP24.77■■□□□ 1.56
RFFL-206ENST00000447669 ASB8Q9H765 288 aa24.77■■□□□ 1.56
RFFL-206ENST00000447669 SLC2A4RGQ9NR83 387 aa24.77■■□□□ 1.56
RFFL-206ENST00000447669 HOXB2P14652 356 aa24.76■■□□□ 1.55
RFFL-206ENST00000447669 FMO4P31512 558 aa24.76■■□□□ 1.55
RFFL-206ENST00000447669 SPAM1P38567 509 aa24.76■■□□□ 1.55
RFFL-206ENST00000447669 WDR4P57081 412 aaKnown RBP24.76■■□□□ 1.55
RFFL-206ENST00000447669 CST6Q15828 149 aa24.76■■□□□ 1.55
RFFL-206ENST00000447669 TYSND1Q2T9J0 566 aa24.76■■□□□ 1.55
RFFL-206ENST00000447669 LIPIQ6XZB0 460 aa24.76■■□□□ 1.55
RFFL-206ENST00000447669 ERN2Q76MJ5 926 aaKnown RBP24.76■■□□□ 1.55
RFFL-206ENST00000447669 PLD6Q8N2A8 252 aaKnown RBP24.76■■□□□ 1.55
RFFL-206ENST00000447669 ARFGAP2Q8N6H7 521 aa24.76■■□□□ 1.55
RFFL-206ENST00000447669 HCAR2Q8TDS4 363 aa24.76■■□□□ 1.55
RFFL-206ENST00000447669 PAIP2Q9BPZ3 127 aaKnown RBP24.76■■□□□ 1.55
RFFL-206ENST00000447669 UNKQ9C0B0 810 aaKnown RBP24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms