RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 RARRES1P49788 294 aa5.05□□□□□ -1.6
SDCBP-205ENST00000447267 THOP1P52888 689 aa5.05□□□□□ -1.6
SDCBP-205ENST00000447267 CACNA2D1P54289 1103 aa5.05□□□□□ -1.6
SDCBP-205ENST00000447267 JAM2P57087 298 aa5.05□□□□□ -1.6
SDCBP-205ENST00000447267 TRDNQ13061 729 aa5.05□□□□□ -1.6
SDCBP-205ENST00000447267 PAK1Q13153 545 aa5.05□□□□□ -1.6
SDCBP-205ENST00000447267 ZNF235Q14590 738 aa5.05□□□□□ -1.6
SDCBP-205ENST00000447267 ASIC2Q16515 512 aa5.05□□□□□ -1.6
SDCBP-205ENST00000447267 RNF151Q2KHN1 245 aa5.05□□□□□ -1.6
SDCBP-205ENST00000447267 CFAP221Q4G0U5 840 aa5.05□□□□□ -1.6
SDCBP-205ENST00000447267 C9orf64Q5T6V5 341 aa5.05□□□□□ -1.6
SDCBP-205ENST00000447267 SPATA1Q5VX52 437 aa5.05□□□□□ -1.6
SDCBP-205ENST00000447267 IGFL4Q6B9Z1 124 aa5.05□□□□□ -1.6
SDCBP-205ENST00000447267 XKRXQ6PP77 449 aa5.05□□□□□ -1.6
SDCBP-205ENST00000447267 ADIPOR2Q86V24 386 aa5.05□□□□□ -1.6
SDCBP-205ENST00000447267 STK40Q8N2I9 435 aa5.05□□□□□ -1.6
SDCBP-205ENST00000447267 ARL10Q8N8L6 244 aa5.05□□□□□ -1.6
SDCBP-205ENST00000447267 ACBD4Q8NC06 268 aa5.05□□□□□ -1.6
SDCBP-205ENST00000447267 GRHL3Q8TE85 626 aa5.05□□□□□ -1.6
SDCBP-205ENST00000447267 CCDC43Q96MW1 224 aaKnown RBP5.05□□□□□ -1.6
SDCBP-205ENST00000447267 ASPSCR1Q9BZE9 553 aa5.05□□□□□ -1.6
SDCBP-205ENST00000447267 GLT8D2Q9H1C3 349 aa5.05□□□□□ -1.6
SDCBP-205ENST00000447267 DCTPP1Q9H773 170 aa5.05□□□□□ -1.6
SDCBP-205ENST00000447267 SEC61A2Q9H9S3 476 aa5.05□□□□□ -1.6
SDCBP-205ENST00000447267 APMAPQ9HDC9 416 aa5.05□□□□□ -1.6
SDCBP-205ENST00000447267 PDE7BQ9NP56 450 aa5.05□□□□□ -1.6
SDCBP-205ENST00000447267 MAGEC2Q9UBF1 373 aaPredicted RBP5.05□□□□□ -1.6
SDCBP-205ENST00000447267 SPASTQ9UBP0 616 aa5.05□□□□□ -1.6
SDCBP-205ENST00000447267 NAALADL1Q9UQQ1 740 aa5.05□□□□□ -1.6
SDCBP-205ENST00000447267 BTRCQ9Y297 605 aa5.05□□□□□ -1.6
SDCBP-205ENST00000447267 PCDHA9Q9Y5H5 950 aa5.05□□□□□ -1.6
SDCBP-205ENST00000447267 EPPK1P58107 5090 aaKnown RBP5.05□□□□□ -1.6
SDCBP-205ENST00000447267 TRBV23-1A0A0A0MS06 115 aa5.04□□□□□ -1.6
SDCBP-205ENST00000447267 TTC34A8MYJ7 566 aa5.04□□□□□ -1.6
SDCBP-205ENST00000447267 LMO7DNF2Z398 122 aa5.04□□□□□ -1.6
SDCBP-205ENST00000447267 ZNF561-AS1K7EIQ3 104 aa5.04□□□□□ -1.6
SDCBP-205ENST00000447267 MASP2O00187 686 aa5.04□□□□□ -1.6
SDCBP-205ENST00000447267 SLC37A4O43826 429 aa5.04□□□□□ -1.6
SDCBP-205ENST00000447267 REC8O95072 547 aa5.04□□□□□ -1.6
SDCBP-205ENST00000447267 CLDN14O95500 239 aa5.04□□□□□ -1.6
SDCBP-205ENST00000447267 IL1BP01584 269 aa5.04□□□□□ -1.6
SDCBP-205ENST00000447267 KLKB1P03952 638 aa5.04□□□□□ -1.6
SDCBP-205ENST00000447267 ANXA13P27216 316 aa5.04□□□□□ -1.6
SDCBP-205ENST00000447267 HLA-FP30511 346 aa5.04□□□□□ -1.6
SDCBP-205ENST00000447267 AKT2P31751 481 aa5.04□□□□□ -1.6
SDCBP-205ENST00000447267 MAGEA11P43364 429 aa5.04□□□□□ -1.6
SDCBP-205ENST00000447267 NAMPTP43490 491 aa5.04□□□□□ -1.6
SDCBP-205ENST00000447267 OR1D5P58170 312 aa5.04□□□□□ -1.6
SDCBP-205ENST00000447267 PSMC1P62191 440 aaKnown RBP5.04□□□□□ -1.6
SDCBP-205ENST00000447267 IL13RA1P78552 427 aa5.04□□□□□ -1.6
SDCBP-205ENST00000447267 DUSP8Q13202 625 aa5.04□□□□□ -1.6
SDCBP-205ENST00000447267 E2F5Q15329 346 aa5.04□□□□□ -1.6
SDCBP-205ENST00000447267 LLGL1Q15334 1064 aa5.04□□□□□ -1.6
SDCBP-205ENST00000447267 GPR19Q15760 415 aa5.04□□□□□ -1.6
SDCBP-205ENST00000447267 MAP9Q49MG5 647 aa5.04□□□□□ -1.6
SDCBP-205ENST00000447267 JADE1Q6IE81 842 aa5.04□□□□□ -1.6
SDCBP-205ENST00000447267 KRTAP5-3Q6L8H2 238 aa5.04□□□□□ -1.6
SDCBP-205ENST00000447267 Q6ZSN1 163 aa5.04□□□□□ -1.6
SDCBP-205ENST00000447267 NCCRP1Q6ZVX7 275 aaPredicted RBP5.04□□□□□ -1.6
SDCBP-205ENST00000447267 LARP4Q71RC2 724 aaKnown RBP eCLIP5.04□□□□□ -1.6
SDCBP-205ENST00000447267 ABI3BPQ7Z7G0 1075 aa5.04□□□□□ -1.6
SDCBP-205ENST00000447267 CUZD1Q86UP6 607 aa5.04□□□□□ -1.6
SDCBP-205ENST00000447267 PIM3Q86V86 326 aa5.04□□□□□ -1.6
SDCBP-205ENST00000447267 TRIM69Q86WT6 500 aa5.04□□□□□ -1.6
SDCBP-205ENST00000447267 TICAM2Q86XR7 235 aa5.04□□□□□ -1.6
SDCBP-205ENST00000447267 SCUBE1Q8IWY4 988 aa5.04□□□□□ -1.6
SDCBP-205ENST00000447267 REXO1L1PQ8IX06 675 aa5.04□□□□□ -1.6
SDCBP-205ENST00000447267 MB21D2Q8IYB1 491 aaPredicted RBP5.04□□□□□ -1.6
SDCBP-205ENST00000447267 PDCL2Q8N4E4 241 aa5.04□□□□□ -1.6
SDCBP-205ENST00000447267 FANCBQ8NB91 859 aa5.04□□□□□ -1.6
SDCBP-205ENST00000447267 MCUQ8NE86 351 aa5.04□□□□□ -1.6
SDCBP-205ENST00000447267 SCAMP5Q8TAC9 235 aa5.04□□□□□ -1.6
SDCBP-205ENST00000447267 TBCKQ8TEA7 893 aa5.04□□□□□ -1.6
SDCBP-205ENST00000447267 FBXO32Q969P5 355 aa5.04□□□□□ -1.6
SDCBP-205ENST00000447267 NEIL1Q96FI4 390 aaPredicted RBP5.04□□□□□ -1.6
SDCBP-205ENST00000447267 SORCS2Q96PQ0 1159 aa5.04□□□□□ -1.6
SDCBP-205ENST00000447267 LMF1Q96S06 567 aa5.04□□□□□ -1.6
SDCBP-205ENST00000447267 RUFY1Q96T51 708 aa5.04□□□□□ -1.6
SDCBP-205ENST00000447267 ACBD6Q9BR61 282 aa5.04□□□□□ -1.6
SDCBP-205ENST00000447267 ZNF559Q9BR84 538 aa5.04□□□□□ -1.6
SDCBP-205ENST00000447267 LRRC61Q9BV99 259 aa5.04□□□□□ -1.6
SDCBP-205ENST00000447267 IL25Q9H293 177 aa5.04□□□□□ -1.6
SDCBP-205ENST00000447267 DEF6Q9H4E7 631 aa5.04□□□□□ -1.6
SDCBP-205ENST00000447267 ANKEF1Q9NU02 776 aa5.04□□□□□ -1.6
SDCBP-205ENST00000447267 TMEM30AQ9NV96 361 aa5.04□□□□□ -1.6
SDCBP-205ENST00000447267 USP25Q9UHP3 1055 aa5.04□□□□□ -1.6
SDCBP-205ENST00000447267 LSM7Q9UK45 103 aaKnown RBP5.04□□□□□ -1.6
SDCBP-205ENST00000447267 GPR34Q9UPC5 381 aa5.04□□□□□ -1.6
SDCBP-205ENST00000447267 AKAP6Q13023 2319 aa5.03□□□□□ -1.6
SDCBP-205ENST00000447267 ESYT3A0FGR9 886 aa5.03□□□□□ -1.6
SDCBP-205ENST00000447267 CCDC69A6NI79 296 aa5.03□□□□□ -1.6
SDCBP-205ENST00000447267 RAD51BO15315 384 aa5.03□□□□□ -1.6
SDCBP-205ENST00000447267 PLRG1O43660 514 aaKnown RBP5.03□□□□□ -1.6
SDCBP-205ENST00000447267 JRKO75564 520 aa5.03□□□□□ -1.6
SDCBP-205ENST00000447267 CEACAM4O75871 244 aa5.03□□□□□ -1.6
SDCBP-205ENST00000447267 HMGB1P09429 215 aaKnown RBP5.03□□□□□ -1.6
SDCBP-205ENST00000447267 DLDP09622 509 aaKnown RBP5.03□□□□□ -1.6
SDCBP-205ENST00000447267 YWHAQP27348 245 aa5.03□□□□□ -1.6
SDCBP-205ENST00000447267 NUDT1P36639 197 aa5.03□□□□□ -1.6
SDCBP-205ENST00000447267 TAF6P49848 677 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms