RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 DRG2P55039 364 aaKnown RBP17.2■□□□□ 0.34
LIME1-202ENST00000444951 ARL4CP56559 192 aa17.2■□□□□ 0.34
LIME1-202ENST00000444951 PPP2CBP62714 309 aa17.2■□□□□ 0.34
LIME1-202ENST00000444951 PPP2CAP67775 309 aa17.2■□□□□ 0.34
LIME1-202ENST00000444951 CAV1Q03135 178 aa17.2■□□□□ 0.34
LIME1-202ENST00000444951 PTPRCAPQ14761 206 aa17.2■□□□□ 0.34
LIME1-202ENST00000444951 HIF1AQ16665 826 aa17.2■□□□□ 0.34
LIME1-202ENST00000444951 ERCC6LQ2NKX8 1250 aa17.2■□□□□ 0.34
LIME1-202ENST00000444951 LIPIQ6XZB0 460 aa17.2■□□□□ 0.34
LIME1-202ENST00000444951 HSD11B1LQ7Z5J1 315 aa17.2■□□□□ 0.34
LIME1-202ENST00000444951 MPP5Q8N3R9 675 aa17.2■□□□□ 0.34
LIME1-202ENST00000444951 SEC14L1Q92503 715 aa17.2■□□□□ 0.34
LIME1-202ENST00000444951 SNX19Q92543 992 aa17.2■□□□□ 0.34
LIME1-202ENST00000444951 FAM131CQ96AQ9 280 aa17.2■□□□□ 0.34
LIME1-202ENST00000444951 ZFYVE1Q9HBF4 777 aa17.2■□□□□ 0.34
LIME1-202ENST00000444951 PREBQ9HCU5 417 aa17.2■□□□□ 0.34
LIME1-202ENST00000444951 BPIFA1Q9NP55 256 aa17.2■□□□□ 0.34
LIME1-202ENST00000444951 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.2■□□□□ 0.34
LIME1-202ENST00000444951 HACD3Q9P035 362 aa17.2■□□□□ 0.34
LIME1-202ENST00000444951 MAD1L1Q9Y6D9 718 aa17.2■□□□□ 0.34
LIME1-202ENST00000444951 MYLKQ15746 1914 aa17.19■□□□□ 0.34
LIME1-202ENST00000444951 BHMG1C9JSJ3 638 aaPredicted RBP17.19■□□□□ 0.34
LIME1-202ENST00000444951 SMAPO00193 183 aa17.19■□□□□ 0.34
LIME1-202ENST00000444951 AP3B1O00203 1094 aa17.19■□□□□ 0.34
LIME1-202ENST00000444951 PROS1P07225 676 aa17.19■□□□□ 0.34
LIME1-202ENST00000444951 C1SP09871 688 aa17.19■□□□□ 0.34
LIME1-202ENST00000444951 MLNP12872 115 aa17.19■□□□□ 0.34
LIME1-202ENST00000444951 C6P13671 934 aa17.19■□□□□ 0.34
LIME1-202ENST00000444951 MAOBP27338 520 aa17.19■□□□□ 0.34
LIME1-202ENST00000444951 TUBB4BP68371 445 aa17.19■□□□□ 0.34
LIME1-202ENST00000444951 TMPRSS15P98073 1019 aa17.19■□□□□ 0.34
LIME1-202ENST00000444951 DHX9Q08211 1270 aaKnown RBP17.19■□□□□ 0.34
LIME1-202ENST00000444951 MSS51Q4VC12 460 aa17.19■□□□□ 0.34
LIME1-202ENST00000444951 DNAJC21Q5F1R6 531 aaKnown RBP17.19■□□□□ 0.34
LIME1-202ENST00000444951 UNQ6494/PRO21346Q6UXR6 183 aa17.19■□□□□ 0.34
LIME1-202ENST00000444951 RFLNAQ6ZTI6 216 aa17.19■□□□□ 0.34
LIME1-202ENST00000444951 PDIK1LQ8N165 341 aa17.19■□□□□ 0.34
LIME1-202ENST00000444951 TTC30BQ8N4P2 665 aa17.19■□□□□ 0.34
LIME1-202ENST00000444951 MINDY1Q8N5J2 469 aa17.19■□□□□ 0.34
LIME1-202ENST00000444951 PPHLN1Q8NEY8 458 aaKnown RBP17.19■□□□□ 0.34
LIME1-202ENST00000444951 BRSK1Q8TDC3 778 aa17.19■□□□□ 0.34
LIME1-202ENST00000444951 ANKZF1Q9H8Y5 726 aa17.19■□□□□ 0.34
LIME1-202ENST00000444951 GDF3Q9NR23 364 aa17.19■□□□□ 0.34
LIME1-202ENST00000444951 SAMD15Q9P1V8 674 aa17.19■□□□□ 0.34
LIME1-202ENST00000444951 RALYQ9UKM9 306 aaKnown RBP17.19■□□□□ 0.34
LIME1-202ENST00000444951 NFU1Q9UMS0 254 aa17.19■□□□□ 0.34
LIME1-202ENST00000444951 ZFR2Q9UPR6 939 aaKnown RBP17.19■□□□□ 0.34
LIME1-202ENST00000444951 SDR42E2A6NKP2 422 aa17.18■□□□□ 0.34
LIME1-202ENST00000444951 C2orf81A6NN90 581 aa17.18■□□□□ 0.34
LIME1-202ENST00000444951 CRTAMO95727 393 aa17.18■□□□□ 0.34
LIME1-202ENST00000444951 ETV3P41162 512 aa17.18■□□□□ 0.34
LIME1-202ENST00000444951 DPP6P42658 865 aa17.18■□□□□ 0.34
LIME1-202ENST00000444951 RPS21P63220 83 aaKnown RBP17.18■□□□□ 0.34
LIME1-202ENST00000444951 PTSQ03393 145 aa17.18■□□□□ 0.34
LIME1-202ENST00000444951 PDIA2Q13087 525 aaKnown RBP17.18■□□□□ 0.34
LIME1-202ENST00000444951 SGCGQ13326 291 aa17.18■□□□□ 0.34
LIME1-202ENST00000444951 MSLNQ13421 630 aaPredicted RBP17.18■□□□□ 0.34
LIME1-202ENST00000444951 NAA30Q147X3 362 aaPredicted RBP17.18■□□□□ 0.34
LIME1-202ENST00000444951 TAF1AQ15573 450 aaPredicted RBP17.18■□□□□ 0.34
LIME1-202ENST00000444951 CDKN3Q16667 212 aa17.18■□□□□ 0.34
LIME1-202ENST00000444951 CES3Q6UWW8 571 aa17.18■□□□□ 0.34
LIME1-202ENST00000444951 HORMAD1Q86X24 394 aa17.18■□□□□ 0.34
LIME1-202ENST00000444951 ANKMY2Q8IV38 441 aa17.18■□□□□ 0.34
LIME1-202ENST00000444951 GSPT2Q8IYD1 628 aaKnown RBP17.18■□□□□ 0.34
LIME1-202ENST00000444951 ZCCHC9Q8N567 271 aaKnown RBP17.18■□□□□ 0.34
LIME1-202ENST00000444951 CEP76Q8TAP6 659 aa17.18■□□□□ 0.34
LIME1-202ENST00000444951 EID2BQ96D98 161 aa17.18■□□□□ 0.34
LIME1-202ENST00000444951 LYSMD1Q96S90 227 aa17.18■□□□□ 0.34
LIME1-202ENST00000444951 SRPK1Q96SB4 655 aaKnown RBP17.18■□□□□ 0.34
LIME1-202ENST00000444951 MYOCQ99972 504 aa17.18■□□□□ 0.34
LIME1-202ENST00000444951 SCNM1Q9BWG6 230 aa17.18■□□□□ 0.34
LIME1-202ENST00000444951 IL22Q9GZX6 179 aa17.18■□□□□ 0.34
LIME1-202ENST00000444951 KDM4CQ9H3R0 1056 aa17.18■□□□□ 0.34
LIME1-202ENST00000444951 TRABDQ9H4I3 376 aa17.18■□□□□ 0.34
LIME1-202ENST00000444951 CHRAC1Q9NRG0 131 aa17.18■□□□□ 0.34
LIME1-202ENST00000444951 ZDHHC18Q9NUE0 388 aa17.18■□□□□ 0.34
LIME1-202ENST00000444951 CD84Q9UIB8 345 aa17.18■□□□□ 0.34
LIME1-202ENST00000444951 HEATR9A2RTY3 570 aa17.17■□□□□ 0.34
LIME1-202ENST00000444951 CCL22O00626 93 aa17.17■□□□□ 0.34
LIME1-202ENST00000444951 ARHGAP33O14559 1287 aa17.17■□□□□ 0.34
LIME1-202ENST00000444951 STX7O15400 261 aaKnown RBP17.17■□□□□ 0.34
LIME1-202ENST00000444951 SLC31A1O15431 190 aa17.17■□□□□ 0.34
LIME1-202ENST00000444951 LDB2O43679 373 aa17.17■□□□□ 0.34
LIME1-202ENST00000444951 HYAL3O43820 417 aaPredicted RBP17.17■□□□□ 0.34
LIME1-202ENST00000444951 TM7SF2O76062 418 aa17.17■□□□□ 0.34
LIME1-202ENST00000444951 CD59P13987 128 aa17.17■□□□□ 0.34
LIME1-202ENST00000444951 ZNF30P17039 623 aa17.17■□□□□ 0.34
LIME1-202ENST00000444951 LPOP22079 712 aaPredicted RBP17.17■□□□□ 0.34
LIME1-202ENST00000444951 ADRA1DP25100 572 aa17.17■□□□□ 0.34
LIME1-202ENST00000444951 STC1P52823 247 aa17.17■□□□□ 0.34
LIME1-202ENST00000444951 CUL1Q13616 776 aa17.17■□□□□ 0.34
LIME1-202ENST00000444951 SMAD1Q15797 465 aaKnown RBP17.17■□□□□ 0.34
LIME1-202ENST00000444951 PCID2Q5JVF3 399 aa17.17■□□□□ 0.34
LIME1-202ENST00000444951 ALS2CLQ60I27 953 aa17.17■□□□□ 0.34
LIME1-202ENST00000444951 KIAA0895LQ68EN5 471 aa17.17■□□□□ 0.34
LIME1-202ENST00000444951 KIAA1161Q6NSJ0 714 aa17.17■□□□□ 0.34
LIME1-202ENST00000444951 Q6ZVL8 140 aa17.17■□□□□ 0.34
LIME1-202ENST00000444951 CENPUQ71F23 418 aa17.17■□□□□ 0.34
LIME1-202ENST00000444951 TMC3Q7Z5M5 1100 aa17.17■□□□□ 0.34
LIME1-202ENST00000444951 RGL4Q8IZJ4 473 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms