RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 KDELC2Q7Z4H8 507 aa18.57■□□□□ 0.56
CCDC188-202ENST00000444532 CACTIN-AS1Q8N1I8 211 aa18.57■□□□□ 0.56
CCDC188-202ENST00000444532 SCAMP4Q969E2 229 aa18.57■□□□□ 0.56
CCDC188-202ENST00000444532 PDXPQ96GD0 296 aa18.57■□□□□ 0.56
CCDC188-202ENST00000444532 FCRL5Q96RD9 977 aa18.57■□□□□ 0.56
CCDC188-202ENST00000444532 FRMD8Q9BZ67 464 aaPredicted RBP18.57■□□□□ 0.56
CCDC188-202ENST00000444532 CYP4F12Q9HCS2 524 aa18.57■□□□□ 0.56
CCDC188-202ENST00000444532 PKD2L2Q9NZM6 624 aa18.57■□□□□ 0.56
CCDC188-202ENST00000444532 CD84Q9UIB8 345 aa18.57■□□□□ 0.56
CCDC188-202ENST00000444532 TPRP12270 2363 aaKnown RBP18.57■□□□□ 0.56
CCDC188-202ENST00000444532 PMPCBO75439 489 aa18.56■□□□□ 0.56
CCDC188-202ENST00000444532 ZNF189O75820 626 aaPredicted RBP18.56■□□□□ 0.56
CCDC188-202ENST00000444532 FTCDO95954 541 aa18.56■□□□□ 0.56
CCDC188-202ENST00000444532 SOD1P00441 154 aa18.56■□□□□ 0.56
CCDC188-202ENST00000444532 EPOP01588 193 aa18.56■□□□□ 0.56
CCDC188-202ENST00000444532 CEACAM5P06731 702 aa18.56■□□□□ 0.56
CCDC188-202ENST00000444532 JUPP14923 745 aa18.56■□□□□ 0.56
CCDC188-202ENST00000444532 RBL1P28749 1068 aa18.56■□□□□ 0.56
CCDC188-202ENST00000444532 EIF3EP60228 445 aaKnown RBP18.56■□□□□ 0.56
CCDC188-202ENST00000444532 NR0B2Q15466 257 aa18.56■□□□□ 0.56
CCDC188-202ENST00000444532 KCTD16Q68DU8 428 aa18.56■□□□□ 0.56
CCDC188-202ENST00000444532 NYAP1Q6ZVC0 841 aa18.56■□□□□ 0.56
CCDC188-202ENST00000444532 CDKL3Q8IVW4 592 aaPredicted RBP18.56■□□□□ 0.56
CCDC188-202ENST00000444532 LRRC8AQ8IWT6 810 aa18.56■□□□□ 0.56
CCDC188-202ENST00000444532 KDF1Q8NAX2 398 aaPredicted RBP18.56■□□□□ 0.56
CCDC188-202ENST00000444532 HES6Q96HZ4 224 aa18.56■□□□□ 0.56
CCDC188-202ENST00000444532 ZFYVE1Q9HBF4 777 aa18.56■□□□□ 0.56
CCDC188-202ENST00000444532 MRPL40Q9NQ50 206 aaKnown RBP18.56■□□□□ 0.56
CCDC188-202ENST00000444532 UBP1Q9NZI7 540 aa18.56■□□□□ 0.56
CCDC188-202ENST00000444532 MOSPD1Q9UJG1 213 aa18.56■□□□□ 0.56
CCDC188-202ENST00000444532 GUCA1BQ9UMX6 200 aa18.56■□□□□ 0.56
CCDC188-202ENST00000444532 PACSIN2Q9UNF0 486 aaPredicted RBP18.56■□□□□ 0.56
CCDC188-202ENST00000444532 CAPN6Q9Y6Q1 641 aa18.56■□□□□ 0.56
CCDC188-202ENST00000444532 LOC285095A0A1B0GVY8 99 aa18.55■□□□□ 0.56
CCDC188-202ENST00000444532 EME2A4GXA9 379 aaPredicted RBP18.55■□□□□ 0.56
CCDC188-202ENST00000444532 GOLGA6L9A6NEM1 432 aa18.55■□□□□ 0.56
CCDC188-202ENST00000444532 DDX3YO15523 660 aaKnown RBP18.55■□□□□ 0.56
CCDC188-202ENST00000444532 CELA2BP08218 269 aaPredicted RBP18.55■□□□□ 0.56
CCDC188-202ENST00000444532 RBP3P10745 1247 aa18.55■□□□□ 0.56
CCDC188-202ENST00000444532 MYF5P13349 255 aa18.55■□□□□ 0.56
CCDC188-202ENST00000444532 TNNT3P45378 269 aaPredicted RBP18.55■□□□□ 0.56
CCDC188-202ENST00000444532 WNT3AP56704 352 aa18.55■□□□□ 0.56
CCDC188-202ENST00000444532 HES3Q5TGS1 186 aa18.55■□□□□ 0.56
CCDC188-202ENST00000444532 AADACL2Q6P093 401 aa18.55■□□□□ 0.56
CCDC188-202ENST00000444532 KDELC1Q6UW63 502 aa18.55■□□□□ 0.56
CCDC188-202ENST00000444532 LYSMD3Q7Z3D4 306 aa18.55■□□□□ 0.56
CCDC188-202ENST00000444532 TTC13Q8NBP0 860 aa18.55■□□□□ 0.56
CCDC188-202ENST00000444532 IFI44Q8TCB0 444 aa18.55■□□□□ 0.56
CCDC188-202ENST00000444532 HIC2Q96JB3 615 aa18.55■□□□□ 0.56
CCDC188-202ENST00000444532 RIOK2Q9BVS4 552 aaKnown RBP18.55■□□□□ 0.56
CCDC188-202ENST00000444532 TMEM168Q9H0V1 697 aa18.55■□□□□ 0.56
CCDC188-202ENST00000444532 CDH19Q9H159 772 aa18.55■□□□□ 0.56
CCDC188-202ENST00000444532 FAM83DQ9H4H8 585 aa18.55■□□□□ 0.56
CCDC188-202ENST00000444532 RAD18Q9NS91 495 aa18.55■□□□□ 0.56
CCDC188-202ENST00000444532 SLC17A4Q9Y2C5 497 aa18.55■□□□□ 0.56
CCDC188-202ENST00000444532 GOLGA4Q13439 2230 aaKnown RBP18.55■□□□□ 0.56
CCDC188-202ENST00000444532 FAM149AA5PLN7 773 aa18.54■□□□□ 0.56
CCDC188-202ENST00000444532 OPA1O60313 960 aa18.54■□□□□ 0.56
CCDC188-202ENST00000444532 STK10O94804 968 aaKnown RBP18.54■□□□□ 0.56
CCDC188-202ENST00000444532 PTMAP06454 111 aaKnown RBP18.54■□□□□ 0.56
CCDC188-202ENST00000444532 INSM1Q01101 510 aaPredicted RBP18.54■□□□□ 0.56
CCDC188-202ENST00000444532 MPP3Q13368 585 aa18.54■□□□□ 0.56
CCDC188-202ENST00000444532 HENMT1Q5T8I9 393 aaKnown RBP18.54■□□□□ 0.56
CCDC188-202ENST00000444532 ITPRIPL1Q6GPH6 555 aa18.54■□□□□ 0.56
CCDC188-202ENST00000444532 DARS2Q6PI48 645 aaKnown RBP18.54■□□□□ 0.56
CCDC188-202ENST00000444532 ZNF662Q6ZS27 426 aa18.54■□□□□ 0.56
CCDC188-202ENST00000444532 TMC3Q7Z5M5 1100 aa18.54■□□□□ 0.56
CCDC188-202ENST00000444532 TAF8Q7Z7C8 310 aa18.54■□□□□ 0.56
CCDC188-202ENST00000444532 SLC35F3Q8IY50 421 aa18.54■□□□□ 0.56
CCDC188-202ENST00000444532 ARL10Q8N8L6 244 aa18.54■□□□□ 0.56
CCDC188-202ENST00000444532 NAT6Q93015 286 aa18.54■□□□□ 0.56
CCDC188-202ENST00000444532 SCARF2Q96GP6 870 aaPredicted RBP18.54■□□□□ 0.56
CCDC188-202ENST00000444532 COX14Q96I36 57 aa18.54■□□□□ 0.56
CCDC188-202ENST00000444532 WDR24Q96S15 920 aa18.54■□□□□ 0.56
CCDC188-202ENST00000444532 GPR63Q9BZJ6 419 aa18.54■□□□□ 0.56
CCDC188-202ENST00000444532 ABCG4Q9H172 646 aa18.54■□□□□ 0.56
CCDC188-202ENST00000444532 CARS2Q9HA77 564 aaKnown RBP18.54■□□□□ 0.56
CCDC188-202ENST00000444532 TRNAU1APQ9NX07 287 aaKnown RBP18.54■□□□□ 0.56
CCDC188-202ENST00000444532 RSPH14Q9UHP6 348 aa18.54■□□□□ 0.56
CCDC188-202ENST00000444532 PADI4Q9UM07 663 aa18.54■□□□□ 0.56
CCDC188-202ENST00000444532 GPR34Q9UPC5 381 aa18.54■□□□□ 0.56
CCDC188-202ENST00000444532 ZNF711Q9Y462 761 aa18.54■□□□□ 0.56
CCDC188-202ENST00000444532 SPEGQ15772 3267 aa18.54■□□□□ 0.56
CCDC188-202ENST00000444532 FRYQ5TBA9 3013 aa18.54■□□□□ 0.56
CCDC188-202ENST00000444532 MYLKQ15746 1914 aa18.53■□□□□ 0.56
CCDC188-202ENST00000444532 CPED1A4D0V7 1026 aa18.53■□□□□ 0.56
CCDC188-202ENST00000444532 NRDCO43847 1150 aa18.53■□□□□ 0.56
CCDC188-202ENST00000444532 FUCA1P04066 466 aa18.53■□□□□ 0.56
CCDC188-202ENST00000444532 IVLP07476 585 aa18.53■□□□□ 0.56
CCDC188-202ENST00000444532 CCDC175P0C221 793 aa18.53■□□□□ 0.56
CCDC188-202ENST00000444532 PIRTP0C851 137 aa18.53■□□□□ 0.56
CCDC188-202ENST00000444532 CAMK2BQ13554 666 aa18.53■□□□□ 0.56
CCDC188-202ENST00000444532 TCEA2Q15560 299 aa18.53■□□□□ 0.56
CCDC188-202ENST00000444532 ST3GAL2Q16842 350 aa18.53■□□□□ 0.56
CCDC188-202ENST00000444532 GUSBP11Q6P575 273 aa18.53■□□□□ 0.56
CCDC188-202ENST00000444532 EFL1Q7Z2Z2 1120 aaKnown RBP18.53■□□□□ 0.56
CCDC188-202ENST00000444532 PDCD7Q8N8D1 485 aaKnown RBP18.53■□□□□ 0.56
CCDC188-202ENST00000444532 GPBAR1Q8TDU6 330 aa18.53■□□□□ 0.56
CCDC188-202ENST00000444532 EID2BQ96D98 161 aa18.53■□□□□ 0.56
CCDC188-202ENST00000444532 OXNAD1Q96HP4 312 aaPredicted RBP18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms