RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 MTTPP55157 894 aa8.09□□□□□ -1.11
CCDC39-201ENST00000442201 NCALDP61601 193 aa8.09□□□□□ -1.11
CCDC39-201ENST00000442201 ST8SIA6P61647 398 aa8.09□□□□□ -1.11
CCDC39-201ENST00000442201 SPIDRQ14159 915 aa8.09□□□□□ -1.11
CCDC39-201ENST00000442201 COL19A1Q14993 1142 aa8.09□□□□□ -1.11
CCDC39-201ENST00000442201 UGP2Q16851 508 aa8.09□□□□□ -1.11
CCDC39-201ENST00000442201 SLC44A4Q53GD3 710 aa8.09□□□□□ -1.11
CCDC39-201ENST00000442201 PARM1Q6UWI2 310 aa8.09□□□□□ -1.11
CCDC39-201ENST00000442201 Q6ZVU0 165 aa8.09□□□□□ -1.11
CCDC39-201ENST00000442201 GLT6D1Q7Z4J2 308 aa8.09□□□□□ -1.11
CCDC39-201ENST00000442201 PIGWQ7Z7B1 504 aa8.09□□□□□ -1.11
CCDC39-201ENST00000442201 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.09□□□□□ -1.11
CCDC39-201ENST00000442201 ANKRD42Q8N9B4 389 aa8.09□□□□□ -1.11
CCDC39-201ENST00000442201 OR13J1Q8NGT2 312 aa8.09□□□□□ -1.11
CCDC39-201ENST00000442201 OR6P1Q8NGX9 317 aa8.09□□□□□ -1.11
CCDC39-201ENST00000442201 STYXQ8WUJ0 223 aa8.09□□□□□ -1.11
CCDC39-201ENST00000442201 CYB5D2Q8WUJ1 264 aa8.09□□□□□ -1.11
CCDC39-201ENST00000442201 SREK1Q8WXA9 508 aaKnown RBP8.09□□□□□ -1.11
CCDC39-201ENST00000442201 SORCS1Q8WY21 1168 aa8.09□□□□□ -1.11
CCDC39-201ENST00000442201 CENPTQ96BT3 561 aa8.09□□□□□ -1.11
CCDC39-201ENST00000442201 TUBGCP5Q96RT8 1024 aa8.09□□□□□ -1.11
CCDC39-201ENST00000442201 KLF6Q99612 283 aaPredicted RBP8.09□□□□□ -1.11
CCDC39-201ENST00000442201 SSU72Q9NP77 194 aaKnown RBP8.09□□□□□ -1.11
CCDC39-201ENST00000442201 ELOVL2Q9NXB9 296 aa8.09□□□□□ -1.11
CCDC39-201ENST00000442201 ARL5AQ9Y689 179 aa8.09□□□□□ -1.11
CCDC39-201ENST00000442201 GOLGA8RI6L899 631 aa8.08□□□□□ -1.12
CCDC39-201ENST00000442201 HTRA2O43464 458 aaPredicted RBP8.08□□□□□ -1.12
CCDC39-201ENST00000442201 BUD23O43709 281 aaKnown RBP8.08□□□□□ -1.12
CCDC39-201ENST00000442201 KDM1AO60341 852 aa8.08□□□□□ -1.12
CCDC39-201ENST00000442201 SPAG7O75391 227 aa8.08□□□□□ -1.12
CCDC39-201ENST00000442201 PIGNO95427 931 aa8.08□□□□□ -1.12
CCDC39-201ENST00000442201 SRPRAP08240 638 aaKnown RBP8.08□□□□□ -1.12
CCDC39-201ENST00000442201 ACADVLP49748 655 aa8.08□□□□□ -1.12
CCDC39-201ENST00000442201 PDE1BQ01064 536 aa8.08□□□□□ -1.12
CCDC39-201ENST00000442201 ACVR1Q04771 509 aa8.08□□□□□ -1.12
CCDC39-201ENST00000442201 GRM3Q14832 879 aa8.08□□□□□ -1.12
CCDC39-201ENST00000442201 EIF4HQ15056 248 aaKnown RBP8.08□□□□□ -1.12
CCDC39-201ENST00000442201 TAF1AQ15573 450 aaPredicted RBP8.08□□□□□ -1.12
CCDC39-201ENST00000442201 GAB4Q2WGN9 574 aa8.08□□□□□ -1.12
CCDC39-201ENST00000442201 DPY19L3Q6ZPD9 716 aa8.08□□□□□ -1.12
CCDC39-201ENST00000442201 ASRGL1Q7L266 308 aa8.08□□□□□ -1.12
CCDC39-201ENST00000442201 TBC1D1Q86TI0 1168 aaPredicted RBP8.08□□□□□ -1.12
CCDC39-201ENST00000442201 CNTN4Q8IWV2 1026 aa8.08□□□□□ -1.12
CCDC39-201ENST00000442201 PLPP6Q8IY26 295 aa8.08□□□□□ -1.12
CCDC39-201ENST00000442201 SMRP1Q8NCR6 262 aa8.08□□□□□ -1.12
CCDC39-201ENST00000442201 MYLIPQ8WY64 445 aa8.08□□□□□ -1.12
CCDC39-201ENST00000442201 FGF14Q92915 247 aa8.08□□□□□ -1.12
CCDC39-201ENST00000442201 HDAC10Q969S8 669 aa8.08□□□□□ -1.12
CCDC39-201ENST00000442201 RBBP8Q99708 897 aa8.08□□□□□ -1.12
CCDC39-201ENST00000442201 TRMT61BQ9BVS5 477 aaKnown RBP8.08□□□□□ -1.12
CCDC39-201ENST00000442201 PLA2G2FQ9BZM2 168 aa8.08□□□□□ -1.12
CCDC39-201ENST00000442201 SCOCQ9UIL1 159 aa8.08□□□□□ -1.12
CCDC39-201ENST00000442201 PLA2G4CQ9UP65 541 aa8.08□□□□□ -1.12
CCDC39-201ENST00000442201 KCTD3Q9Y597 815 aa8.08□□□□□ -1.12
CCDC39-201ENST00000442201 KANSL1LA0AUZ9 987 aa8.08□□□□□ -1.12
CCDC39-201ENST00000442201 HMX2A2RU54 273 aa8.08□□□□□ -1.12
CCDC39-201ENST00000442201 TRAFD1O14545 582 aaPredicted RBP8.08□□□□□ -1.12
CCDC39-201ENST00000442201 PRPF4O43172 522 aaKnown RBP eCLIP8.08□□□□□ -1.12
CCDC39-201ENST00000442201 ECI2O75521 394 aa8.08□□□□□ -1.12
CCDC39-201ENST00000442201 GDI1P31150 447 aa8.08□□□□□ -1.12
CCDC39-201ENST00000442201 SLC6A11P48066 632 aa8.08□□□□□ -1.12
CCDC39-201ENST00000442201 SERPINB8P50452 374 aa8.08□□□□□ -1.12
CCDC39-201ENST00000442201 VASPP50552 380 aaPredicted RBP8.08□□□□□ -1.12
CCDC39-201ENST00000442201 LIMK2P53671 638 aa8.08□□□□□ -1.12
CCDC39-201ENST00000442201 SLC18A1P54219 525 aa8.08□□□□□ -1.12
CCDC39-201ENST00000442201 ADRM1Q16186 407 aa8.08□□□□□ -1.12
CCDC39-201ENST00000442201 ZNF470Q6ECI4 717 aa8.08□□□□□ -1.12
CCDC39-201ENST00000442201 KLC3Q6P597 504 aa8.08□□□□□ -1.12
CCDC39-201ENST00000442201 TIFABQ6ZNK6 161 aa8.08□□□□□ -1.12
CCDC39-201ENST00000442201 MTSS1LQ765P7 747 aa8.08□□□□□ -1.12
CCDC39-201ENST00000442201 GDAP1Q8TB36 358 aa8.08□□□□□ -1.12
CCDC39-201ENST00000442201 PIH1D2Q8WWB5 315 aa8.08□□□□□ -1.12
CCDC39-201ENST00000442201 SERAC1Q96JX3 654 aa8.08□□□□□ -1.12
CCDC39-201ENST00000442201 DNAJC1Q96KC8 554 aaKnown RBP8.08□□□□□ -1.12
CCDC39-201ENST00000442201 MRGPRX3Q96LB0 322 aa8.08□□□□□ -1.12
CCDC39-201ENST00000442201 TBATAQ96M53 351 aa8.08□□□□□ -1.12
CCDC39-201ENST00000442201 CPEB1Q9BZB8 566 aaKnown RBP8.08□□□□□ -1.12
CCDC39-201ENST00000442201 ZDHHC6Q9H6R6 413 aa8.08□□□□□ -1.12
CCDC39-201ENST00000442201 GTSE1Q9NYZ3 720 aa8.08□□□□□ -1.12
CCDC39-201ENST00000442201 LNPEPQ9UIQ6 1025 aa8.08□□□□□ -1.12
CCDC39-201ENST00000442201 NUP210Q8TEM1 1887 aaPredicted RBP8.08□□□□□ -1.12
CCDC39-201ENST00000442201 C2orf16Q68DN1 1984 aa8.08□□□□□ -1.12
CCDC39-201ENST00000442201 TYROBPO43914 113 aa8.07□□□□□ -1.12
CCDC39-201ENST00000442201 SIN3BO75182 1162 aa8.07□□□□□ -1.12
CCDC39-201ENST00000442201 RPP40O75818 363 aaKnown RBP8.07□□□□□ -1.12
CCDC39-201ENST00000442201 SLC4A1P02730 911 aa8.07□□□□□ -1.12
CCDC39-201ENST00000442201 CPA3P15088 417 aa8.07□□□□□ -1.12
CCDC39-201ENST00000442201 LPOP22079 712 aaPredicted RBP8.07□□□□□ -1.12
CCDC39-201ENST00000442201 ARSDP51689 593 aa8.07□□□□□ -1.12
CCDC39-201ENST00000442201 KCNJ2P63252 427 aa8.07□□□□□ -1.12
CCDC39-201ENST00000442201 TMPRSS15P98073 1019 aa8.07□□□□□ -1.12
CCDC39-201ENST00000442201 KDSRQ06136 332 aa8.07□□□□□ -1.12
CCDC39-201ENST00000442201 MPP2Q14168 576 aa8.07□□□□□ -1.12
CCDC39-201ENST00000442201 FXNQ16595 210 aa8.07□□□□□ -1.12
CCDC39-201ENST00000442201 KIAA0408Q6ZU52 694 aa8.07□□□□□ -1.12
CCDC39-201ENST00000442201 NDUFAF2Q8N183 169 aa8.07□□□□□ -1.12
CCDC39-201ENST00000442201 CCDC197Q8NCU1 140 aa8.07□□□□□ -1.12
CCDC39-201ENST00000442201 MDGA1Q8NFP4 955 aa8.07□□□□□ -1.12
CCDC39-201ENST00000442201 OR13C4Q8NGS5 318 aa8.07□□□□□ -1.12
CCDC39-201ENST00000442201 OR2A12Q8NGT7 310 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms