RNA–Protein interactions for RNA: ENST00000442151.6

CD44-211, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best)

Gene CD44, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-211ENST00000442151 CFHR1Q03591 330 aa7.76□□□□□ -1.17
CD44-211ENST00000442151 LRP8Q14114 963 aa7.76□□□□□ -1.17
CD44-211ENST00000442151 PAFAH1B3Q15102 231 aaKnown RBP7.76□□□□□ -1.17
CD44-211ENST00000442151 TPRG1LQ5T0D9 272 aa7.76□□□□□ -1.17
CD44-211ENST00000442151 RAET1GQ6H3X3 334 aa7.76□□□□□ -1.17
CD44-211ENST00000442151 ADAMTSL4Q6UY14 1074 aa7.76□□□□□ -1.17
CD44-211ENST00000442151 ZNF605Q86T29 641 aa7.76□□□□□ -1.17
CD44-211ENST00000442151 VSIG1Q86XK7 387 aa7.76□□□□□ -1.17
CD44-211ENST00000442151 KYQ8NBH2 561 aa7.76□□□□□ -1.17
CD44-211ENST00000442151 OR8K1Q8NGG5 319 aa7.76□□□□□ -1.17
CD44-211ENST00000442151 FAM71BQ8TC56 605 aa7.76□□□□□ -1.17
CD44-211ENST00000442151 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.76□□□□□ -1.17
CD44-211ENST00000442151 ZDHHC1Q8WTX9 485 aa7.76□□□□□ -1.17
CD44-211ENST00000442151 CPLX3Q8WVH0 158 aa7.76□□□□□ -1.17
CD44-211ENST00000442151 SNRNP27Q8WVK2 155 aaKnown RBP7.76□□□□□ -1.17
CD44-211ENST00000442151 NAF1Q96HR8 494 aaKnown RBP7.76□□□□□ -1.17
CD44-211ENST00000442151 SPSB2Q99619 263 aa7.76□□□□□ -1.17
CD44-211ENST00000442151 NOD2Q9HC29 1040 aa7.76□□□□□ -1.17
CD44-211ENST00000442151 NT5MQ9NPB1 228 aa7.76□□□□□ -1.17
CD44-211ENST00000442151 RBM22Q9NW64 420 aaKnown RBP eCLIP7.76□□□□□ -1.17
CD44-211ENST00000442151 GOLGA6AQ9NYA3 693 aa7.76□□□□□ -1.17
CD44-211ENST00000442151 PKD2L2Q9NZM6 624 aa7.76□□□□□ -1.17
CD44-211ENST00000442151 ACSL6Q9UKU0 697 aa7.76□□□□□ -1.17
CD44-211ENST00000442151 RAI2Q9Y5P3 530 aa7.76□□□□□ -1.17
CD44-211ENST00000442151 ZZEF1O43149 2961 aa7.76□□□□□ -1.17
CD44-211ENST00000442151 TMEM202A6NGA9 273 aa7.75□□□□□ -1.17
CD44-211ENST00000442151 ZNF487B1APH4 448 aa7.75□□□□□ -1.17
CD44-211ENST00000442151 D6RAR5 112 aa7.75□□□□□ -1.17
CD44-211ENST00000442151 HGSO14964 777 aaPredicted RBP7.75□□□□□ -1.17
CD44-211ENST00000442151 PROSCO94903 275 aa7.75□□□□□ -1.17
CD44-211ENST00000442151 UGT1A5P35504 534 aa7.75□□□□□ -1.17
CD44-211ENST00000442151 GARSP41250 739 aaKnown RBP7.75□□□□□ -1.17
CD44-211ENST00000442151 RGRP47804 291 aa7.75□□□□□ -1.17
CD44-211ENST00000442151 ATP1A2P50993 1020 aa7.75□□□□□ -1.17
CD44-211ENST00000442151 GALNT2Q10471 571 aa7.75□□□□□ -1.17
CD44-211ENST00000442151 SQSTM1Q13501 440 aa7.75□□□□□ -1.17
CD44-211ENST00000442151 CNGA3Q16281 694 aa7.75□□□□□ -1.17
CD44-211ENST00000442151 SMTNL2Q2TAL5 461 aa7.75□□□□□ -1.17
CD44-211ENST00000442151 MAP9Q49MG5 647 aa7.75□□□□□ -1.17
CD44-211ENST00000442151 ARHGAP40Q5TG30 622 aa7.75□□□□□ -1.17
CD44-211ENST00000442151 DENND2CQ68D51 928 aa7.75□□□□□ -1.17
CD44-211ENST00000442151 USP53Q70EK8 1073 aa7.75□□□□□ -1.17
CD44-211ENST00000442151 HEATR4Q86WZ0 1026 aa7.75□□□□□ -1.17
CD44-211ENST00000442151 CBARPQ8N350 705 aaPredicted RBP7.75□□□□□ -1.17
CD44-211ENST00000442151 Q8N9G6 341 aaPredicted RBP7.75□□□□□ -1.17
CD44-211ENST00000442151 NETO2Q8NC67 525 aa7.75□□□□□ -1.17
CD44-211ENST00000442151 EXD1Q8NHP7 514 aa7.75□□□□□ -1.17
CD44-211ENST00000442151 ZNF564Q8TBZ8 553 aaPredicted RBP7.75□□□□□ -1.17
CD44-211ENST00000442151 MAML1Q92585 1016 aa7.75□□□□□ -1.17
CD44-211ENST00000442151 HPS1Q92902 700 aa7.75□□□□□ -1.17
CD44-211ENST00000442151 VOPP1Q96AW1 172 aa7.75□□□□□ -1.17
CD44-211ENST00000442151 AP2M1Q96CW1 435 aa7.75□□□□□ -1.17
CD44-211ENST00000442151 AHCYL2Q96HN2 611 aaKnown RBP7.75□□□□□ -1.17
CD44-211ENST00000442151 MCCC1Q96RQ3 725 aaPredicted RBP7.75□□□□□ -1.17
CD44-211ENST00000442151 SEMA3CQ99985 751 aa7.75□□□□□ -1.17
CD44-211ENST00000442151 FERMT1Q9BQL6 677 aa7.75□□□□□ -1.17
CD44-211ENST00000442151 EFHD1Q9BUP0 239 aa7.75□□□□□ -1.17
CD44-211ENST00000442151 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.75□□□□□ -1.17
CD44-211ENST00000442151 THAP2Q9H0W7 228 aa7.75□□□□□ -1.17
CD44-211ENST00000442151 EPB41L1Q9H4G0 881 aa7.75□□□□□ -1.17
CD44-211ENST00000442151 CBX8Q9HC52 389 aa7.75□□□□□ -1.17
CD44-211ENST00000442151 ATXN7L1Q9ULK2 861 aaPredicted RBP7.75□□□□□ -1.17
CD44-211ENST00000442151 ACACAQ13085 2346 aa7.75□□□□□ -1.17
CD44-211ENST00000442151 SSU72P8A0A1W2PR75 194 aa7.75□□□□□ -1.17
CD44-211ENST00000442151 A8MX80 341 aa7.75□□□□□ -1.17
CD44-211ENST00000442151 B4DGG1 531 aa7.75□□□□□ -1.17
CD44-211ENST00000442151 GPR89AB7ZAQ6 455 aa7.75□□□□□ -1.17
CD44-211ENST00000442151 K7ENP7 123 aa7.75□□□□□ -1.17
CD44-211ENST00000442151 CAPN5O15484 640 aaPredicted RBP7.75□□□□□ -1.17
CD44-211ENST00000442151 AKR1B10O60218 316 aa7.75□□□□□ -1.17
CD44-211ENST00000442151 ASMTLO95671 621 aa7.75□□□□□ -1.17
CD44-211ENST00000442151 GPR89BP0CG08 455 aa7.75□□□□□ -1.17
CD44-211ENST00000442151 CSTF2P33240 577 aaKnown RBP eCLIP7.75□□□□□ -1.17
CD44-211ENST00000442151 GNPDA1P46926 289 aa7.75□□□□□ -1.17
CD44-211ENST00000442151 PPM1FP49593 454 aaPredicted RBP7.75□□□□□ -1.17
CD44-211ENST00000442151 GPLD1P80108 840 aa7.75□□□□□ -1.17
CD44-211ENST00000442151 SKOR1P84550 965 aa7.75□□□□□ -1.17
CD44-211ENST00000442151 CDK3Q00526 305 aa7.75□□□□□ -1.17
CD44-211ENST00000442151 ZFP36L1Q07352 338 aaKnown RBP7.75□□□□□ -1.17
CD44-211ENST00000442151 HLTFQ14527 1009 aaKnown RBP eCLIP7.75□□□□□ -1.17
CD44-211ENST00000442151 ZSCAN23Q3MJ62 389 aa7.75□□□□□ -1.17
CD44-211ENST00000442151 ANKRD20A8PQ5CZ79 823 aa7.75□□□□□ -1.17
CD44-211ENST00000442151 MANEAQ5SRI9 462 aa7.75□□□□□ -1.17
CD44-211ENST00000442151 PHF19Q5T6S3 580 aa7.75□□□□□ -1.17
CD44-211ENST00000442151 INO80CQ6PI98 192 aaPredicted RBP7.75□□□□□ -1.17
CD44-211ENST00000442151 CRTC1Q6UUV9 634 aa7.75□□□□□ -1.17
CD44-211ENST00000442151 ARHGAP36Q6ZRI8 547 aa7.75□□□□□ -1.17
CD44-211ENST00000442151 CYP4V2Q6ZWL3 525 aaPredicted RBP7.75□□□□□ -1.17
CD44-211ENST00000442151 SPRED1Q7Z699 444 aa7.75□□□□□ -1.17
CD44-211ENST00000442151 ZSWIM9Q86XI8 627 aa7.75□□□□□ -1.17
CD44-211ENST00000442151 GALNT13Q8IUC8 556 aa7.75□□□□□ -1.17
CD44-211ENST00000442151 RHOT2Q8IXI1 618 aa7.75□□□□□ -1.17
CD44-211ENST00000442151 CCDC13Q8IYE1 715 aa7.75□□□□□ -1.17
CD44-211ENST00000442151 NPWQ8N729 165 aa7.75□□□□□ -1.17
CD44-211ENST00000442151 PLA2G15Q8NCC3 412 aa7.75□□□□□ -1.17
CD44-211ENST00000442151 CCNYQ8ND76 341 aa7.75□□□□□ -1.17
CD44-211ENST00000442151 OR10G6Q8NH81 332 aa7.75□□□□□ -1.17
CD44-211ENST00000442151 CALR3Q96L12 384 aaKnown RBP7.75□□□□□ -1.17
CD44-211ENST00000442151 MLPHQ9BV36 600 aaPredicted RBP7.75□□□□□ -1.17
CD44-211ENST00000442151 FRMD8Q9BZ67 464 aaPredicted RBP7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms