RNA–Protein interactions for RNA: ENST00000438055.5

TTC3-209, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-209ENST00000438055 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.7■□□□□ 0.26
TTC3-209ENST00000438055 C7orf72A4D263 438 aa16.7■□□□□ 0.26
TTC3-209ENST00000438055 LDB2O43679 373 aa16.7■□□□□ 0.26
TTC3-209ENST00000438055 FGF1P05230 155 aa16.7■□□□□ 0.26
TTC3-209ENST00000438055 CD1DP15813 335 aa16.7■□□□□ 0.26
TTC3-209ENST00000438055 FLT3LGP49771 235 aa16.7■□□□□ 0.26
TTC3-209ENST00000438055 DIO3P55073 304 aa16.7■□□□□ 0.26
TTC3-209ENST00000438055 MYLK3Q32MK0 819 aa16.7■□□□□ 0.26
TTC3-209ENST00000438055 CD300LGQ6UXG3 332 aa16.7■□□□□ 0.26
TTC3-209ENST00000438055 KLHDC9Q8NEP7 349 aa16.7■□□□□ 0.26
TTC3-209ENST00000438055 OR2T34Q8NGX1 318 aa16.7■□□□□ 0.26
TTC3-209ENST00000438055 OR2T3Q8NH03 318 aa16.7■□□□□ 0.26
TTC3-209ENST00000438055 DDI1Q8WTU0 396 aa16.7■□□□□ 0.26
TTC3-209ENST00000438055 GPR21Q99679 349 aa16.7■□□□□ 0.26
TTC3-209ENST00000438055 TMEM248Q9NWD8 314 aa16.7■□□□□ 0.26
TTC3-209ENST00000438055 SCML2Q9UQR0 700 aa16.7■□□□□ 0.26
TTC3-209ENST00000438055 H3BSA7 217 aa16.7■□□□□ 0.26
TTC3-209ENST00000438055 RTN3O95197 1032 aaPredicted RBP16.7■□□□□ 0.26
TTC3-209ENST00000438055 CCDC117Q8IWD4 279 aaPredicted RBP16.7■□□□□ 0.26
TTC3-209ENST00000438055 CBR4Q8N4T8 237 aa16.7■□□□□ 0.26
TTC3-209ENST00000438055 STAG3L4Q8TBR4 150 aa16.7■□□□□ 0.26
TTC3-209ENST00000438055 ARHGAP39Q9C0H5 1083 aa16.7■□□□□ 0.26
TTC3-209ENST00000438055 SYTL2Q9HCH5 934 aa16.7■□□□□ 0.26
TTC3-209ENST00000438055 MYRFQ9Y2G1 1151 aa16.7■□□□□ 0.26
TTC3-209ENST00000438055 DHRS12A0PJE2 317 aa16.69■□□□□ 0.26
TTC3-209ENST00000438055 NPEPPSL1A6NEC2 478 aa16.69■□□□□ 0.26
TTC3-209ENST00000438055 ZNF37AP17032 561 aaPredicted RBP16.69■□□□□ 0.26
TTC3-209ENST00000438055 HLA-DPA1P20036 260 aa16.69■□□□□ 0.26
TTC3-209ENST00000438055 SLC7A1P30825 629 aa16.69■□□□□ 0.26
TTC3-209ENST00000438055 NR1H2P55055 460 aa16.69■□□□□ 0.26
TTC3-209ENST00000438055 CLCQ05315 142 aa16.69■□□□□ 0.26
TTC3-209ENST00000438055 TWF1Q12792 350 aa16.69■□□□□ 0.26
TTC3-209ENST00000438055 DUSP4Q13115 394 aa16.69■□□□□ 0.26
TTC3-209ENST00000438055 IHHQ14623 411 aa16.69■□□□□ 0.26
TTC3-209ENST00000438055 TTC33Q6PID6 262 aaPredicted RBP16.69■□□□□ 0.26
TTC3-209ENST00000438055 RETREG3Q86VR2 466 aa16.69■□□□□ 0.26
TTC3-209ENST00000438055 ZFP28Q8NHY6 868 aa16.69■□□□□ 0.26
TTC3-209ENST00000438055 RIN3Q8TB24 985 aa16.69■□□□□ 0.26
TTC3-209ENST00000438055 C1orf74Q96LT6 269 aa16.69■□□□□ 0.26
TTC3-209ENST00000438055 PRICKLE1Q96MT3 831 aaPredicted RBP16.69■□□□□ 0.26
TTC3-209ENST00000438055 ARNT2Q9HBZ2 717 aa16.69■□□□□ 0.26
TTC3-209ENST00000438055 SBF1O95248 1867 aa16.69■□□□□ 0.26
TTC3-209ENST00000438055 A0A0U1RQS6 177 aa16.69■□□□□ 0.26
TTC3-209ENST00000438055 CDC7O00311 574 aa16.69■□□□□ 0.26
TTC3-209ENST00000438055 ENPP3O14638 875 aa16.69■□□□□ 0.26
TTC3-209ENST00000438055 MUSKO15146 869 aa16.69■□□□□ 0.26
TTC3-209ENST00000438055 MTHFD1P11586 935 aaKnown RBP16.69■□□□□ 0.26
TTC3-209ENST00000438055 NCK1P16333 377 aa16.69■□□□□ 0.26
TTC3-209ENST00000438055 ATP6V1B2P21281 511 aa16.69■□□□□ 0.26
TTC3-209ENST00000438055 IL10RBQ08334 325 aa16.69■□□□□ 0.26
TTC3-209ENST00000438055 ZNF549Q6P9A3 640 aa16.69■□□□□ 0.26
TTC3-209ENST00000438055 ARRDC2Q8TBH0 407 aa16.69■□□□□ 0.26
TTC3-209ENST00000438055 ACOX2Q99424 681 aa16.69■□□□□ 0.26
TTC3-209ENST00000438055 OSBPL11Q9BXB4 747 aa16.69■□□□□ 0.26
TTC3-209ENST00000438055 THEGQ9P2T0 379 aa16.69■□□□□ 0.26
TTC3-209ENST00000438055 PCDHGC4Q9Y5F7 938 aa16.69■□□□□ 0.26
TTC3-209ENST00000438055 PAPSS2O95340 614 aaPredicted RBP16.69■□□□□ 0.26
TTC3-209ENST00000438055 SPATA31D3P0C874 917 aa16.69■□□□□ 0.26
TTC3-209ENST00000438055 RPL10P27635 214 aaKnown RBP16.69■□□□□ 0.26
TTC3-209ENST00000438055 CSRP3P50461 194 aa16.69■□□□□ 0.26
TTC3-209ENST00000438055 SEMA3AQ14563 771 aa16.69■□□□□ 0.26
TTC3-209ENST00000438055 TIGD2Q4W5G0 525 aa16.69■□□□□ 0.26
TTC3-209ENST00000438055 SPATA31D4Q6ZUB0 917 aa16.69■□□□□ 0.26
TTC3-209ENST00000438055 LARP4Q71RC2 724 aaKnown RBP eCLIP16.69■□□□□ 0.262e-7■■■□□ 16.7
TTC3-209ENST00000438055 BEND5Q7L4P6 421 aa16.69■□□□□ 0.26
TTC3-209ENST00000438055 METTL25Q8N6Q8 603 aa16.69■□□□□ 0.26
TTC3-209ENST00000438055 CDYL2Q8N8U2 506 aa16.69■□□□□ 0.26
TTC3-209ENST00000438055 FAM110BQ8TC76 370 aa16.69■□□□□ 0.26
TTC3-209ENST00000438055 CDKN2AIPNLQ96HQ2 116 aa16.69■□□□□ 0.26
TTC3-209ENST00000438055 PHF12Q96QT6 1004 aa16.69■□□□□ 0.26
TTC3-209ENST00000438055 PKMYT1Q99640 499 aa16.69■□□□□ 0.26
TTC3-209ENST00000438055 TRMT6Q9UJA5 497 aaKnown RBP16.69■□□□□ 0.26
TTC3-209ENST00000438055 MMP2P08253 660 aa16.68■□□□□ 0.26
TTC3-209ENST00000438055 RPL26P61254 145 aaKnown RBP16.68■□□□□ 0.26
TTC3-209ENST00000438055 RPS24P62847 133 aaKnown RBP16.68■□□□□ 0.26
TTC3-209ENST00000438055 CHSY3Q70JA7 882 aa16.68■□□□□ 0.26
TTC3-209ENST00000438055 C16orf59Q7L2K0 433 aa16.68■□□□□ 0.26
TTC3-209ENST00000438055 BRSK1Q8TDC3 778 aa16.68■□□□□ 0.26
TTC3-209ENST00000438055 TRIB2Q92519 343 aa16.68■□□□□ 0.26
TTC3-209ENST00000438055 HGH1Q9BTY7 390 aa16.68■□□□□ 0.26
TTC3-209ENST00000438055 RALGAPA2Q2PPJ7 1873 aa16.68■□□□□ 0.26
TTC3-209ENST00000438055 C2orf81A6NN90 581 aa16.68■□□□□ 0.26
TTC3-209ENST00000438055 PEX11BO96011 259 aa16.68■□□□□ 0.26
TTC3-209ENST00000438055 PYGLP06737 847 aa16.68■□□□□ 0.26
TTC3-209ENST00000438055 FASP25445 335 aa16.68■□□□□ 0.26
TTC3-209ENST00000438055 AGTR2P50052 363 aa16.68■□□□□ 0.26
TTC3-209ENST00000438055 OXCT1P55809 520 aa16.68■□□□□ 0.26
TTC3-209ENST00000438055 SERINC3Q13530 473 aa16.68■□□□□ 0.26
TTC3-209ENST00000438055 FRA10AC1Q70Z53 315 aa16.68■□□□□ 0.26
TTC3-209ENST00000438055 LIN28AQ9H9Z2 209 aaKnown RBP16.68■□□□□ 0.26
TTC3-209ENST00000438055 GABRQQ9UN88 632 aa16.68■□□□□ 0.26
TTC3-209ENST00000438055 MANSC4A6NHS7 340 aaPredicted RBP16.68■□□□□ 0.26
TTC3-209ENST00000438055 UNCXA6NJT0 531 aa16.68■□□□□ 0.26
TTC3-209ENST00000438055 STX7O15400 261 aaKnown RBP16.68■□□□□ 0.26
TTC3-209ENST00000438055 ATXN1LP0C7T5 689 aaKnown RBP16.68■□□□□ 0.26
TTC3-209ENST00000438055 ELNP15502 786 aa16.68■□□□□ 0.26
TTC3-209ENST00000438055 ZNF26P17031 533 aaPredicted RBP16.68■□□□□ 0.26
TTC3-209ENST00000438055 ITGB6P18564 788 aa16.68■□□□□ 0.26
TTC3-209ENST00000438055 CAPN3P20807 821 aa16.68■□□□□ 0.26
TTC3-209ENST00000438055 TACR2P21452 398 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms