RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 ARHGAP12Q8IWW6 846 aa7.75□□□□□ -1.17
VPS50-203ENST00000436177 ZDHHC1Q8WTX9 485 aa7.75□□□□□ -1.17
VPS50-203ENST00000436177 TTC9Q92623 222 aa7.75□□□□□ -1.17
VPS50-203ENST00000436177 VOPP1Q96AW1 172 aa7.75□□□□□ -1.17
VPS50-203ENST00000436177 DTD2Q96FN9 168 aa7.75□□□□□ -1.17
VPS50-203ENST00000436177 AHCYL2Q96HN2 611 aaKnown RBP7.75□□□□□ -1.17
VPS50-203ENST00000436177 NUDCD1Q96RS6 583 aa7.75□□□□□ -1.17
VPS50-203ENST00000436177 PEBP4Q96S96 227 aa7.75□□□□□ -1.17
VPS50-203ENST00000436177 TRIM7Q9C029 511 aa7.75□□□□□ -1.17
VPS50-203ENST00000436177 STN1Q9H668 368 aaKnown RBP7.75□□□□□ -1.17
VPS50-203ENST00000436177 CLMPQ9H6B4 373 aa7.75□□□□□ -1.17
VPS50-203ENST00000436177 HAUS4Q9H6D7 363 aa7.75□□□□□ -1.17
VPS50-203ENST00000436177 RDH14Q9HBH5 336 aa7.75□□□□□ -1.17
VPS50-203ENST00000436177 TRNAU1APQ9NX07 287 aaKnown RBP7.75□□□□□ -1.17
VPS50-203ENST00000436177 CWC15Q9P013 229 aaKnown RBP7.75□□□□□ -1.17
VPS50-203ENST00000436177 TAAR2Q9P1P5 351 aa7.75□□□□□ -1.17
VPS50-203ENST00000436177 ACSL6Q9UKU0 697 aa7.75□□□□□ -1.17
VPS50-203ENST00000436177 DNPEPQ9ULA0 475 aa7.75□□□□□ -1.17
VPS50-203ENST00000436177 PCDHGC4Q9Y5F7 938 aa7.75□□□□□ -1.17
VPS50-203ENST00000436177 RP1P56715 2156 aa7.75□□□□□ -1.17
VPS50-203ENST00000436177 A0A1W2PQC6 194 aa7.74□□□□□ -1.17
VPS50-203ENST00000436177 STMND1H3BQB6 276 aa7.74□□□□□ -1.17
VPS50-203ENST00000436177 PSMD11O00231 422 aa7.74□□□□□ -1.17
VPS50-203ENST00000436177 TRAFD1O14545 582 aaPredicted RBP7.74□□□□□ -1.17
VPS50-203ENST00000436177 HGSO14964 777 aaPredicted RBP7.74□□□□□ -1.17
VPS50-203ENST00000436177 CASC3O15234 703 aaKnown RBP7.74□□□□□ -1.17
VPS50-203ENST00000436177 EFSO43281 561 aa7.74□□□□□ -1.17
VPS50-203ENST00000436177 HTRA2O43464 458 aaPredicted RBP7.74□□□□□ -1.17
VPS50-203ENST00000436177 PYGLP06737 847 aa7.74□□□□□ -1.17
VPS50-203ENST00000436177 ITIH1P19827 911 aa7.74□□□□□ -1.17
VPS50-203ENST00000436177 LORP23490 312 aaPredicted RBP7.74□□□□□ -1.17
VPS50-203ENST00000436177 CSTF2P33240 577 aaKnown RBP eCLIP7.74□□□□□ -1.17
VPS50-203ENST00000436177 GJC1P36383 396 aa7.74□□□□□ -1.17
VPS50-203ENST00000436177 TRIM23P36406 574 aa7.74□□□□□ -1.17
VPS50-203ENST00000436177 ETV3P41162 512 aa7.74□□□□□ -1.17
VPS50-203ENST00000436177 GPR1P46091 355 aa7.74□□□□□ -1.17
VPS50-203ENST00000436177 WDR4P57081 412 aaKnown RBP7.74□□□□□ -1.17
VPS50-203ENST00000436177 OR1D5P58170 312 aa7.74□□□□□ -1.17
VPS50-203ENST00000436177 CDK3Q00526 305 aa7.74□□□□□ -1.17
VPS50-203ENST00000436177 PIGHQ14442 188 aaPredicted RBP7.74□□□□□ -1.17
VPS50-203ENST00000436177 TGIF1Q15583 401 aa7.74□□□□□ -1.17
VPS50-203ENST00000436177 DPYSL2Q16555 572 aa7.74□□□□□ -1.17
VPS50-203ENST00000436177 HADHQ16836 314 aaKnown RBP7.74□□□□□ -1.17
VPS50-203ENST00000436177 ANO6Q4KMQ2 910 aa7.74□□□□□ -1.17
VPS50-203ENST00000436177 CCDC122Q5T0U0 273 aa7.74□□□□□ -1.17
VPS50-203ENST00000436177 ZFYVE27Q5T4F4 411 aa7.74□□□□□ -1.17
VPS50-203ENST00000436177 KCTD16Q68DU8 428 aa7.74□□□□□ -1.17
VPS50-203ENST00000436177 MRPL14Q6P1L8 145 aaKnown RBP7.74□□□□□ -1.17
VPS50-203ENST00000436177 OGFOD3Q6PK18 319 aa7.74□□□□□ -1.17
VPS50-203ENST00000436177 ZNF571Q7Z3V5 609 aaPredicted RBP7.74□□□□□ -1.17
VPS50-203ENST00000436177 VASH2Q86V25 355 aa7.74□□□□□ -1.17
VPS50-203ENST00000436177 FAM129CQ86XR2 697 aa7.74□□□□□ -1.17
VPS50-203ENST00000436177 GALNT13Q8IUC8 556 aa7.74□□□□□ -1.17
VPS50-203ENST00000436177 LRRC49Q8IUZ0 686 aa7.74□□□□□ -1.17
VPS50-203ENST00000436177 SLITRK4Q8IW52 837 aa7.74□□□□□ -1.17
VPS50-203ENST00000436177 AGBL5Q8NDL9 886 aa7.74□□□□□ -1.17
VPS50-203ENST00000436177 CCL4L1Q8NHW4 92 aa7.74□□□□□ -1.17
VPS50-203ENST00000436177 USP7Q93009 1102 aa7.74□□□□□ -1.17
VPS50-203ENST00000436177 COQ10AQ96MF6 247 aa7.74□□□□□ -1.17
VPS50-203ENST00000436177 CSPG4P5Q96PW8 444 aa7.74□□□□□ -1.17
VPS50-203ENST00000436177 OR2M4Q96R27 311 aa7.74□□□□□ -1.17
VPS50-203ENST00000436177 DPYSL5Q9BPU6 564 aa7.74□□□□□ -1.17
VPS50-203ENST00000436177 MGME1Q9BQP7 344 aa7.74□□□□□ -1.17
VPS50-203ENST00000436177 LGR4Q9BXB1 951 aa7.74□□□□□ -1.17
VPS50-203ENST00000436177 TEX101Q9BY14 249 aa7.74□□□□□ -1.17
VPS50-203ENST00000436177 POLR1EQ9GZS1 481 aaKnown RBP7.74□□□□□ -1.17
VPS50-203ENST00000436177 NOD2Q9HC29 1040 aa7.74□□□□□ -1.17
VPS50-203ENST00000436177 NT5MQ9NPB1 228 aa7.74□□□□□ -1.17
VPS50-203ENST00000436177 KCNK4Q9NYG8 393 aa7.74□□□□□ -1.17
VPS50-203ENST00000436177 IP6K2Q9UHH9 426 aa7.74□□□□□ -1.17
VPS50-203ENST00000436177 PHTF1Q9UMS5 762 aa7.74□□□□□ -1.17
VPS50-203ENST00000436177 SUFUQ9UMX1 484 aa7.74□□□□□ -1.17
VPS50-203ENST00000436177 NAV2Q8IVL1 2488 aa7.74□□□□□ -1.17
VPS50-203ENST00000436177 LRRK2Q5S007 2527 aa7.74□□□□□ -1.17
VPS50-203ENST00000436177 SHROOM3Q8TF72 1996 aa7.73□□□□□ -1.17
VPS50-203ENST00000436177 NPIPB15A6NHN6 443 aaPredicted RBP7.73□□□□□ -1.17
VPS50-203ENST00000436177 DDX3XO00571 662 aaKnown RBP eCLIP7.73□□□□□ -1.17
VPS50-203ENST00000436177 DUX1O43812 170 aa7.73□□□□□ -1.17
VPS50-203ENST00000436177 PGLSO95336 258 aa7.73□□□□□ -1.17
VPS50-203ENST00000436177 ASMTLO95671 621 aa7.73□□□□□ -1.17
VPS50-203ENST00000436177 ECEL1O95672 775 aa7.73□□□□□ -1.17
VPS50-203ENST00000436177 IVLP07476 585 aa7.73□□□□□ -1.17
VPS50-203ENST00000436177 CTPS1P17812 591 aa7.73□□□□□ -1.17
VPS50-203ENST00000436177 AMPD1P23109 780 aa7.73□□□□□ -1.17
VPS50-203ENST00000436177 VARSP26640 1264 aaKnown RBP7.73□□□□□ -1.17
VPS50-203ENST00000436177 TEAD1P28347 426 aa7.73□□□□□ -1.17
VPS50-203ENST00000436177 MAN1A1P33908 653 aa7.73□□□□□ -1.17
VPS50-203ENST00000436177 PRKCIP41743 596 aa7.73□□□□□ -1.17
VPS50-203ENST00000436177 GPR3P46089 330 aa7.73□□□□□ -1.17
VPS50-203ENST00000436177 MAXP61244 160 aa7.73□□□□□ -1.17
VPS50-203ENST00000436177 CTBSQ01459 385 aa7.73□□□□□ -1.17
VPS50-203ENST00000436177 ZFP36L1Q07352 338 aaKnown RBP7.73□□□□□ -1.17
VPS50-203ENST00000436177 TRAF2Q12933 501 aa7.73□□□□□ -1.17
VPS50-203ENST00000436177 TRA2AQ13595 282 aaKnown RBP eCLIP7.73□□□□□ -1.17
VPS50-203ENST00000436177 LRP8Q14114 963 aa7.73□□□□□ -1.17
VPS50-203ENST00000436177 NCAPHQ15003 741 aa7.73□□□□□ -1.17
VPS50-203ENST00000436177 NFKBIBQ15653 356 aa7.73□□□□□ -1.17
VPS50-203ENST00000436177 TIGD7Q6NT04 549 aaPredicted RBP7.73□□□□□ -1.17
VPS50-203ENST00000436177 Q6ZVL8 140 aa7.73□□□□□ -1.17
VPS50-203ENST00000436177 MARK2Q7KZI7 788 aaKnown RBP7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms