RNA–Protein interactions for RNA: ENST00000434046.6

SYNPO2-203, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-203ENST00000434046 CACNB2Q08289 660 aaPredicted RBP7.4□□□□□ -1.22
SYNPO2-203ENST00000434046 FOXD4Q12950 439 aaPredicted RBP7.4□□□□□ -1.22
SYNPO2-203ENST00000434046 UGP2Q16851 508 aa7.4□□□□□ -1.22
SYNPO2-203ENST00000434046 AASDHQ4L235 1098 aaPredicted RBP7.4□□□□□ -1.22
SYNPO2-203ENST00000434046 GLB1LQ6UWU2 654 aa7.4□□□□□ -1.22
SYNPO2-203ENST00000434046 THAP5Q7Z6K1 395 aa7.4□□□□□ -1.22
SYNPO2-203ENST00000434046 RAB44Q7Z6P3 723 aaPredicted RBP7.4□□□□□ -1.22
SYNPO2-203ENST00000434046 PACRGLQ8N7B6 248 aa7.4□□□□□ -1.22
SYNPO2-203ENST00000434046 RAET1EQ8TD07 263 aa7.4□□□□□ -1.22
SYNPO2-203ENST00000434046 MCRS1Q96EZ8 462 aa7.4□□□□□ -1.22
SYNPO2-203ENST00000434046 FAR2Q96K12 515 aa7.4□□□□□ -1.22
SYNPO2-203ENST00000434046 QKIQ96PU8 341 aaKnown RBP eCLIP7.4□□□□□ -1.22
SYNPO2-203ENST00000434046 MRPL45Q9BRJ2 306 aaKnown RBP7.4□□□□□ -1.22
SYNPO2-203ENST00000434046 ATXN3LQ9H3M9 355 aa7.4□□□□□ -1.22
SYNPO2-203ENST00000434046 CDHR5Q9HBB8 845 aa7.4□□□□□ -1.22
SYNPO2-203ENST00000434046 GOLGA2P5Q9HBQ8 144 aa7.4□□□□□ -1.22
SYNPO2-203ENST00000434046 TRAF6Q9Y4K3 522 aa7.4□□□□□ -1.22
SYNPO2-203ENST00000434046 SMIM35A0A1B0GVV1 85 aa7.4□□□□□ -1.22
SYNPO2-203ENST00000434046 ILVBLA1L0T0 632 aa7.4□□□□□ -1.22
SYNPO2-203ENST00000434046 ARPC2O15144 300 aa7.4□□□□□ -1.22
SYNPO2-203ENST00000434046 NOBOXO60393 691 aa7.4□□□□□ -1.22
SYNPO2-203ENST00000434046 GUCY1B2O75343 617 aa7.4□□□□□ -1.22
SYNPO2-203ENST00000434046 BCAS1O75363 584 aaPredicted RBP7.4□□□□□ -1.22
SYNPO2-203ENST00000434046 POMCP01189 267 aa7.4□□□□□ -1.22
SYNPO2-203ENST00000434046 JCHAINP01591 159 aa7.4□□□□□ -1.22
SYNPO2-203ENST00000434046 HOXD10P28358 340 aa7.4□□□□□ -1.22
SYNPO2-203ENST00000434046 S100A5P33763 92 aa7.4□□□□□ -1.22
SYNPO2-203ENST00000434046 GRIK1P39086 918 aa7.4□□□□□ -1.22
SYNPO2-203ENST00000434046 ASPAP45381 313 aa7.4□□□□□ -1.22
SYNPO2-203ENST00000434046 PLA2G16P53816 162 aa7.4□□□□□ -1.22
SYNPO2-203ENST00000434046 VBP1P61758 197 aa7.4□□□□□ -1.22
SYNPO2-203ENST00000434046 FPGSQ05932 587 aa7.4□□□□□ -1.22
SYNPO2-203ENST00000434046 MEP1AQ16819 746 aa7.4□□□□□ -1.22
SYNPO2-203ENST00000434046 C6orf10Q5SRN2 563 aa7.4□□□□□ -1.22
SYNPO2-203ENST00000434046 KIAA1841Q6NSI8 718 aa7.4□□□□□ -1.22
SYNPO2-203ENST00000434046 SPESP1Q6UW49 350 aa7.4□□□□□ -1.22
SYNPO2-203ENST00000434046 VASH1Q7L8A9 365 aaPredicted RBP7.4□□□□□ -1.22
SYNPO2-203ENST00000434046 ZDHHC13Q8IUH4 622 aa7.4□□□□□ -1.22
SYNPO2-203ENST00000434046 ARMC8Q8IUR7 673 aa7.4□□□□□ -1.22
SYNPO2-203ENST00000434046 SPATA2LQ8IUW3 424 aaPredicted RBP7.4□□□□□ -1.22
SYNPO2-203ENST00000434046 DEFB106AQ8N104 65 aa7.4□□□□□ -1.22
SYNPO2-203ENST00000434046 ZNF567Q8N184 647 aa7.4□□□□□ -1.22
SYNPO2-203ENST00000434046 TTC30BQ8N4P2 665 aa7.4□□□□□ -1.22
SYNPO2-203ENST00000434046 LRRC52Q8N7C0 313 aa7.4□□□□□ -1.22
SYNPO2-203ENST00000434046 OR6P1Q8NGX9 317 aa7.4□□□□□ -1.22
SYNPO2-203ENST00000434046 MCFD2Q8NI22 146 aa7.4□□□□□ -1.22
SYNPO2-203ENST00000434046 TOP1MTQ969P6 601 aa7.4□□□□□ -1.22
SYNPO2-203ENST00000434046 GPBP1L1Q9HC44 474 aaPredicted RBP7.4□□□□□ -1.22
SYNPO2-203ENST00000434046 NEK6Q9HC98 313 aa7.4□□□□□ -1.22
SYNPO2-203ENST00000434046 CCM2LQ9NUG4 571 aaPredicted RBP7.4□□□□□ -1.22
SYNPO2-203ENST00000434046 KLQ9UEF7 1012 aa7.4□□□□□ -1.22
SYNPO2-203ENST00000434046 BTRCQ9Y297 605 aa7.4□□□□□ -1.22
SYNPO2-203ENST00000434046 ANKRD6Q9Y2G4 727 aa7.4□□□□□ -1.22
SYNPO2-203ENST00000434046 PRG3Q9Y2Y8 225 aaPredicted RBP7.4□□□□□ -1.22
SYNPO2-203ENST00000434046 TCRBV3S1A0A5B6 114 aa7.4□□□□□ -1.23
SYNPO2-203ENST00000434046 CCDC162PA2VCL2 907 aa7.4□□□□□ -1.23
SYNPO2-203ENST00000434046 ANKRD34BA5PLL1 514 aa7.4□□□□□ -1.23
SYNPO2-203ENST00000434046 A8MV72 311 aaPredicted RBP7.4□□□□□ -1.23
SYNPO2-203ENST00000434046 KPNA6O60684 536 aa7.4□□□□□ -1.23
SYNPO2-203ENST00000434046 NDUFS2O75306 463 aa7.4□□□□□ -1.23
SYNPO2-203ENST00000434046 DBTP11182 482 aaKnown RBP7.4□□□□□ -1.23
SYNPO2-203ENST00000434046 MBL2P11226 248 aaPredicted RBP7.4□□□□□ -1.23
SYNPO2-203ENST00000434046 GFAPP14136 432 aa7.4□□□□□ -1.23
SYNPO2-203ENST00000434046 ATP5F1P24539 256 aaPredicted RBP7.4□□□□□ -1.23
SYNPO2-203ENST00000434046 NMBRP28336 390 aa7.4□□□□□ -1.23
SYNPO2-203ENST00000434046 PTPN9P43378 593 aa7.4□□□□□ -1.23
SYNPO2-203ENST00000434046 TKTL1P51854 596 aa7.4□□□□□ -1.23
SYNPO2-203ENST00000434046 IST1P53990 364 aa7.4□□□□□ -1.23
SYNPO2-203ENST00000434046 SNX17Q15036 470 aa7.4□□□□□ -1.23
SYNPO2-203ENST00000434046 ARHGEF6Q15052 776 aa7.4□□□□□ -1.23
SYNPO2-203ENST00000434046 ZNF792Q3KQV3 632 aa7.4□□□□□ -1.23
SYNPO2-203ENST00000434046 ZNF470Q6ECI4 717 aa7.4□□□□□ -1.23
SYNPO2-203ENST00000434046 ZNF280DQ6N043 979 aa7.4□□□□□ -1.23
SYNPO2-203ENST00000434046 CNSTQ6PJW8 725 aa7.4□□□□□ -1.23
SYNPO2-203ENST00000434046 LCLAT1Q6UWP7 414 aa7.4□□□□□ -1.23
SYNPO2-203ENST00000434046 ZDHHC17Q8IUH5 632 aa7.4□□□□□ -1.23
SYNPO2-203ENST00000434046 DENND6AQ8IWF6 608 aa7.4□□□□□ -1.23
SYNPO2-203ENST00000434046 MIER2Q8N344 545 aa7.4□□□□□ -1.23
SYNPO2-203ENST00000434046 PSD4Q8NDX1 1056 aa7.4□□□□□ -1.23
SYNPO2-203ENST00000434046 TRPV3Q8NET8 790 aa7.4□□□□□ -1.23
SYNPO2-203ENST00000434046 FBXO30Q8TB52 745 aa7.4□□□□□ -1.23
SYNPO2-203ENST00000434046 RDH11Q8TC12 318 aa7.4□□□□□ -1.23
SYNPO2-203ENST00000434046 KCTD15Q96SI1 283 aaPredicted RBP7.4□□□□□ -1.23
SYNPO2-203ENST00000434046 R3HDMLQ9H3Y0 253 aa7.4□□□□□ -1.23
SYNPO2-203ENST00000434046 NANOGQ9H9S0 305 aa7.4□□□□□ -1.23
SYNPO2-203ENST00000434046 CNTN6Q9UQ52 1028 aa7.4□□□□□ -1.23
SYNPO2-203ENST00000434046 PDE10AQ9Y233 779 aa7.4□□□□□ -1.23
SYNPO2-203ENST00000434046 SMIM28A0A1B0GU29 152 aa7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 ALDH2P05091 517 aa7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 THRBP10828 461 aa7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 ODC1P11926 461 aa7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 CDH1P12830 882 aa7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 GPD2P43304 727 aa7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 HK2P52789 917 aa7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 DEFA1P59665 94 aa7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 DEFA3P59666 94 aa7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 TNK2Q07912 1038 aa7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 OXA1LQ15070 435 aa7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 SLC36A3Q495N2 470 aa7.39□□□□□ -1.23
SYNPO2-203ENST00000434046 RABL3Q5HYI8 236 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms