RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 GLB1LQ6UWU2 654 aa11.78□□□□□ -0.52
CD44-209ENST00000433892 ZBTB49Q6ZSB9 765 aa11.78□□□□□ -0.52
CD44-209ENST00000433892 CFAP52Q8N1V2 620 aa11.78□□□□□ -0.52
CD44-209ENST00000433892 MIER2Q8N344 545 aa11.78□□□□□ -0.52
CD44-209ENST00000433892 OR2T34Q8NGX1 318 aa11.78□□□□□ -0.52
CD44-209ENST00000433892 OR2T3Q8NH03 318 aa11.78□□□□□ -0.52
CD44-209ENST00000433892 GRIN3AQ8TCU5 1115 aa11.78□□□□□ -0.52
CD44-209ENST00000433892 FBXO32Q969P5 355 aa11.78□□□□□ -0.52
CD44-209ENST00000433892 DUS3LQ96G46 650 aaKnown RBP11.78□□□□□ -0.52
CD44-209ENST00000433892 HIC2Q96JB3 615 aa11.78□□□□□ -0.52
CD44-209ENST00000433892 C8orf48Q96LL4 319 aa11.78□□□□□ -0.52
CD44-209ENST00000433892 ZNF512Q96ME7 567 aaPredicted RBP11.78□□□□□ -0.52
CD44-209ENST00000433892 UHRF1Q96T88 793 aaPredicted RBP11.78□□□□□ -0.52
CD44-209ENST00000433892 GPATCH1Q9BRR8 931 aaKnown RBP11.78□□□□□ -0.52
CD44-209ENST00000433892 TRIM8Q9BZR9 551 aa11.78□□□□□ -0.52
CD44-209ENST00000433892 UPF3AQ9H1J1 476 aaKnown RBP11.78□□□□□ -0.52
CD44-209ENST00000433892 DDX18Q9NVP1 670 aaKnown RBP11.78□□□□□ -0.52
CD44-209ENST00000433892 AURKCQ9UQB9 309 aa11.78□□□□□ -0.52
CD44-209ENST00000433892 FAM50BQ9Y247 325 aa11.78□□□□□ -0.52
CD44-209ENST00000433892 SOCS2O14508 198 aa11.77□□□□□ -0.52
CD44-209ENST00000433892 ANGPT2O15123 496 aa11.77□□□□□ -0.52
CD44-209ENST00000433892 CLASP2O75122 1294 aaKnown RBP11.77□□□□□ -0.52
CD44-209ENST00000433892 FGF1P05230 155 aa11.77□□□□□ -0.52
CD44-209ENST00000433892 HGFP14210 728 aa11.77□□□□□ -0.52
CD44-209ENST00000433892 HLA-DPA1P20036 260 aa11.77□□□□□ -0.52
CD44-209ENST00000433892 ZNF157P51786 506 aaPredicted RBP11.77□□□□□ -0.52
CD44-209ENST00000433892 NR1H2P55055 460 aa11.77□□□□□ -0.52
CD44-209ENST00000433892 TXNL4AP83876 142 aaKnown RBP11.77□□□□□ -0.52
CD44-209ENST00000433892 ECT2LQ008S8 904 aa11.77□□□□□ -0.52
CD44-209ENST00000433892 CREB5Q02930 508 aa11.77□□□□□ -0.52
CD44-209ENST00000433892 TRIM32Q13049 653 aa11.77□□□□□ -0.52
CD44-209ENST00000433892 BIRC2Q13490 618 aa11.77□□□□□ -0.52
CD44-209ENST00000433892 TRIP4Q15650 581 aaPredicted RBP11.77□□□□□ -0.52
CD44-209ENST00000433892 KCNA10Q16322 511 aa11.77□□□□□ -0.52
CD44-209ENST00000433892 NFE2Q16621 373 aaPredicted RBP11.77□□□□□ -0.52
CD44-209ENST00000433892 PARP15Q460N3 678 aa11.77□□□□□ -0.52
CD44-209ENST00000433892 CARM1Q86X55 608 aa11.77□□□□□ -0.52
CD44-209ENST00000433892 SPPL2CQ8IUH8 684 aa11.77□□□□□ -0.52
CD44-209ENST00000433892 PHYKPLQ8IUZ5 450 aa11.77□□□□□ -0.52
CD44-209ENST00000433892 TSPAN14Q8NG11 270 aa11.77□□□□□ -0.52
CD44-209ENST00000433892 GPR150Q8NGU9 434 aa11.77□□□□□ -0.52
CD44-209ENST00000433892 BRSK1Q8TDC3 778 aa11.77□□□□□ -0.52
CD44-209ENST00000433892 DDI1Q8WTU0 396 aa11.77□□□□□ -0.52
CD44-209ENST00000433892 TRIB2Q92519 343 aa11.77□□□□□ -0.52
CD44-209ENST00000433892 FUBP3Q96I24 572 aaKnown RBP eCLIP11.77□□□□□ -0.52
CD44-209ENST00000433892 B3GALT6Q96L58 329 aa11.77□□□□□ -0.52
CD44-209ENST00000433892 ATOH8Q96SQ7 321 aa11.77□□□□□ -0.52
CD44-209ENST00000433892 CAAP1Q9H8G2 361 aa11.77□□□□□ -0.52
CD44-209ENST00000433892 SEMA4BQ9NPR2 832 aaPredicted RBP11.77□□□□□ -0.52
CD44-209ENST00000433892 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.77□□□□□ -0.52
CD44-209ENST00000433892 ETAA1Q9NY74 926 aa11.77□□□□□ -0.52
CD44-209ENST00000433892 DMTF1Q9Y222 760 aa11.77□□□□□ -0.52
CD44-209ENST00000433892 NOD1Q9Y239 953 aa11.77□□□□□ -0.52
CD44-209ENST00000433892 SLC27A5Q9Y2P5 690 aa11.77□□□□□ -0.52
CD44-209ENST00000433892 A0A0D9SEW6 157 aa11.77□□□□□ -0.53
CD44-209ENST00000433892 SAC3D1A6NKF1 404 aa11.77□□□□□ -0.53
CD44-209ENST00000433892 DRGXA6NNA5 263 aa11.77□□□□□ -0.53
CD44-209ENST00000433892 BBIP1A8MTZ0 92 aa11.77□□□□□ -0.53
CD44-209ENST00000433892 SUPT3HB4E1H0 165 aa11.77□□□□□ -0.53
CD44-209ENST00000433892 H3BSA7 217 aa11.77□□□□□ -0.53
CD44-209ENST00000433892 PLOD2O00469 737 aa11.77□□□□□ -0.53
CD44-209ENST00000433892 HTRA2O43464 458 aaPredicted RBP11.77□□□□□ -0.53
CD44-209ENST00000433892 PRAMEF11O60813 436 aa11.77□□□□□ -0.53
CD44-209ENST00000433892 SUPT3HO75486 399 aa11.77□□□□□ -0.53
CD44-209ENST00000433892 UGT1A6P19224 532 aa11.77□□□□□ -0.53
CD44-209ENST00000433892 EEF1DP29692 281 aaKnown RBP11.77□□□□□ -0.53
CD44-209ENST00000433892 SUOXP51687 545 aa11.77□□□□□ -0.53
CD44-209ENST00000433892 CLCN2P51788 898 aa11.77□□□□□ -0.53
CD44-209ENST00000433892 STC1P52823 247 aa11.77□□□□□ -0.53
CD44-209ENST00000433892 PRKCQQ04759 706 aa11.77□□□□□ -0.53
CD44-209ENST00000433892 TNK2Q07912 1038 aa11.77□□□□□ -0.53
CD44-209ENST00000433892 TAF10Q12962 218 aa11.77□□□□□ -0.53
CD44-209ENST00000433892 RPS6KA2Q15349 733 aa11.77□□□□□ -0.53
CD44-209ENST00000433892 VARS2Q5ST30 1063 aaKnown RBP11.77□□□□□ -0.53
CD44-209ENST00000433892 KANK2Q63ZY3 851 aa11.77□□□□□ -0.53
CD44-209ENST00000433892 KRT80Q6KB66 452 aa11.77□□□□□ -0.53
CD44-209ENST00000433892 PAQR3Q6TCH7 311 aa11.77□□□□□ -0.53
CD44-209ENST00000433892 RTN4RL1Q86UN2 441 aaPredicted RBP11.77□□□□□ -0.53
CD44-209ENST00000433892 SLC15A3Q8IY34 581 aa11.77□□□□□ -0.53
CD44-209ENST00000433892 RHEBL1Q8TAI7 183 aa11.77□□□□□ -0.53
CD44-209ENST00000433892 DIS3LQ8TF46 1054 aaKnown RBP11.77□□□□□ -0.53
CD44-209ENST00000433892 FEM1CQ96JP0 617 aa11.77□□□□□ -0.53
CD44-209ENST00000433892 ASB2Q96Q27 587 aa11.77□□□□□ -0.53
CD44-209ENST00000433892 AARSD1Q9BTE6 412 aaKnown RBP11.77□□□□□ -0.53
CD44-209ENST00000433892 POLG2Q9UHN1 485 aa11.77□□□□□ -0.53
CD44-209ENST00000433892 IKZF3Q9UKT9 509 aa11.77□□□□□ -0.53
CD44-209ENST00000433892 PCDHB5Q9Y5E4 795 aa11.77□□□□□ -0.53
CD44-209ENST00000433892 FAM149AA5PLN7 773 aa11.76□□□□□ -0.53
CD44-209ENST00000433892 TPST1O60507 370 aa11.76□□□□□ -0.53
CD44-209ENST00000433892 RHOBTB1O94844 696 aa11.76□□□□□ -0.53
CD44-209ENST00000433892 H6PDO95479 791 aa11.76□□□□□ -0.53
CD44-209ENST00000433892 FMO4P31512 558 aa11.76□□□□□ -0.53
CD44-209ENST00000433892 DIO3P55073 304 aa11.76□□□□□ -0.53
CD44-209ENST00000433892 SH3BGRP55822 239 aaPredicted RBP11.76□□□□□ -0.53
CD44-209ENST00000433892 CLCQ05315 142 aa11.76□□□□□ -0.53
CD44-209ENST00000433892 CLLU1OSQ5K130 101 aa11.76□□□□□ -0.53
CD44-209ENST00000433892 NADSYN1Q6IA69 706 aa11.76□□□□□ -0.53
CD44-209ENST00000433892 TRIML2Q8N7C3 387 aa11.76□□□□□ -0.53
CD44-209ENST00000433892 CDKN2AIPNLQ96HQ2 116 aa11.76□□□□□ -0.53
CD44-209ENST00000433892 CCT7Q99832 543 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms