RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 WDR45BQ5MNZ6 344 aa3.52□□□□□ -1.85
PTPN4-205ENST00000433888 TXNDC8Q6A555 127 aa3.52□□□□□ -1.85
PTPN4-205ENST00000433888 HIST2H2BDQ6DRA6 164 aa3.52□□□□□ -1.85
PTPN4-205ENST00000433888 METTL2BQ6P1Q9 378 aaKnown RBP3.52□□□□□ -1.85
PTPN4-205ENST00000433888 ATF7IPQ6VMQ6 1270 aa3.52□□□□□ -1.85
PTPN4-205ENST00000433888 ZCCHC9Q8N567 271 aaKnown RBP3.52□□□□□ -1.85
PTPN4-205ENST00000433888 ZNF248Q8NDW4 579 aa3.52□□□□□ -1.85
PTPN4-205ENST00000433888 PIGTQ969N2 578 aa3.52□□□□□ -1.85
PTPN4-205ENST00000433888 METTL2AQ96IZ6 378 aaKnown RBP3.52□□□□□ -1.85
PTPN4-205ENST00000433888 PPP1R3EQ9H7J1 279 aa3.52□□□□□ -1.85
PTPN4-205ENST00000433888 LOXL2Q9Y4K0 774 aa3.52□□□□□ -1.85
PTPN4-205ENST00000433888 TDRD15B5MCY1 1934 aaKnown RBP3.51□□□□□ -1.85
PTPN4-205ENST00000433888 IGLV5-45A0A087WSX0 123 aa3.51□□□□□ -1.85
PTPN4-205ENST00000433888 PEX14O75381 377 aa3.51□□□□□ -1.85
PTPN4-205ENST00000433888 URODP06132 367 aa3.51□□□□□ -1.85
PTPN4-205ENST00000433888 LUMP51884 338 aaPredicted RBP3.51□□□□□ -1.85
PTPN4-205ENST00000433888 TERF1P54274 439 aa3.51□□□□□ -1.85
PTPN4-205ENST00000433888 LMO4P61968 165 aa3.51□□□□□ -1.85
PTPN4-205ENST00000433888 EFNB1P98172 346 aa3.51□□□□□ -1.85
PTPN4-205ENST00000433888 VEPH1Q14D04 833 aa3.51□□□□□ -1.85
PTPN4-205ENST00000433888 TAF5Q15542 800 aa3.51□□□□□ -1.85
PTPN4-205ENST00000433888 WDR38Q5JTN6 314 aa3.51□□□□□ -1.85
PTPN4-205ENST00000433888 SFMBT2Q5VUG0 894 aa3.51□□□□□ -1.85
PTPN4-205ENST00000433888 FAM171BQ6P995 826 aa3.51□□□□□ -1.85
PTPN4-205ENST00000433888 CPLX2Q6PUV4 134 aaKnown RBP3.51□□□□□ -1.85
PTPN4-205ENST00000433888 C11orf65Q8NCR3 313 aa3.51□□□□□ -1.85
PTPN4-205ENST00000433888 HUS1BQ8NHY5 278 aa3.51□□□□□ -1.85
PTPN4-205ENST00000433888 RHBDF1Q96CC6 855 aa3.51□□□□□ -1.85
PTPN4-205ENST00000433888 LRR1Q96L50 414 aa3.51□□□□□ -1.85
PTPN4-205ENST00000433888 BBS4Q96RK4 519 aa3.51□□□□□ -1.85
PTPN4-205ENST00000433888 ATOH8Q96SQ7 321 aa3.51□□□□□ -1.85
PTPN4-205ENST00000433888 TKTL2Q9H0I9 626 aa3.51□□□□□ -1.85
PTPN4-205ENST00000433888 GPR108Q9NPR9 543 aa3.51□□□□□ -1.85
PTPN4-205ENST00000433888 HINT3Q9NQE9 182 aaKnown RBP3.51□□□□□ -1.85
PTPN4-205ENST00000433888 BEX4Q9NWD9 120 aaPredicted RBP3.51□□□□□ -1.85
PTPN4-205ENST00000433888 HSPB7Q9UBY9 170 aa3.51□□□□□ -1.85
PTPN4-205ENST00000433888 TTC7AQ9ULT0 858 aaPredicted RBP3.51□□□□□ -1.85
PTPN4-205ENST00000433888 ZNHIT1O43257 154 aa3.5□□□□□ -1.85
PTPN4-205ENST00000433888 SYNGR3O43761 229 aa3.5□□□□□ -1.85
PTPN4-205ENST00000433888 TSPAN3O60637 253 aa3.5□□□□□ -1.85
PTPN4-205ENST00000433888 TACC1O75410 805 aa3.5□□□□□ -1.85
PTPN4-205ENST00000433888 FTCDO95954 541 aa3.5□□□□□ -1.85
PTPN4-205ENST00000433888 TFP02787 698 aa3.5□□□□□ -1.85
PTPN4-205ENST00000433888 GALTP07902 379 aa3.5□□□□□ -1.85
PTPN4-205ENST00000433888 GNB3P16520 340 aa3.5□□□□□ -1.85
PTPN4-205ENST00000433888 CHRNB4P30926 498 aa3.5□□□□□ -1.85
PTPN4-205ENST00000433888 HIST2H2ACQ16777 129 aaPredicted RBP3.5□□□□□ -1.85
PTPN4-205ENST00000433888 ZNF280DQ6N043 979 aa3.5□□□□□ -1.85
PTPN4-205ENST00000433888 FAM53AQ6NSI3 398 aaPredicted RBP3.5□□□□□ -1.85
PTPN4-205ENST00000433888 BRAT1Q6PJG6 821 aa3.5□□□□□ -1.85
PTPN4-205ENST00000433888 C15orf39Q6ZRI6 1047 aa3.5□□□□□ -1.85
PTPN4-205ENST00000433888 BBS12Q6ZW61 710 aa3.5□□□□□ -1.85
PTPN4-205ENST00000433888 GTSCR1Q86UQ5 136 aa3.5□□□□□ -1.85
PTPN4-205ENST00000433888 PCDH20Q8N6Y1 951 aaKnown RBP3.5□□□□□ -1.85
PTPN4-205ENST00000433888 TNIP2Q8NFZ5 429 aa3.5□□□□□ -1.85
PTPN4-205ENST00000433888 OR5R1Q8NH85 324 aa3.5□□□□□ -1.85
PTPN4-205ENST00000433888 FCAMRQ8WWV6 532 aa3.5□□□□□ -1.85
PTPN4-205ENST00000433888 SLC41A2Q96JW4 573 aa3.5□□□□□ -1.85
PTPN4-205ENST00000433888 ZNF354BQ96LW1 612 aa3.5□□□□□ -1.85
PTPN4-205ENST00000433888 FAM110AQ9BQ89 295 aa3.5□□□□□ -1.85
PTPN4-205ENST00000433888 DCTN5Q9BTE1 182 aa3.5□□□□□ -1.85
PTPN4-205ENST00000433888 HEMGNQ9BXL5 484 aa3.5□□□□□ -1.85
PTPN4-205ENST00000433888 GLIS2Q9BZE0 524 aaPredicted RBP3.5□□□□□ -1.85
PTPN4-205ENST00000433888 NDST4Q9H3R1 872 aa3.5□□□□□ -1.85
PTPN4-205ENST00000433888 FAM96BQ9Y3D0 163 aa3.5□□□□□ -1.85
PTPN4-205ENST00000433888 RNF215Q9Y6U7 377 aa3.5□□□□□ -1.85
PTPN4-205ENST00000433888 PTPRCP08575 1304 aa3.49□□□□□ -1.85
PTPN4-205ENST00000433888 AGRNO00468 2067 aa3.49□□□□□ -1.85
PTPN4-205ENST00000433888 A0A087X002 238 aa3.49□□□□□ -1.85
PTPN4-205ENST00000433888 ZCWPW2A0A1B0GU75 182 aa3.49□□□□□ -1.85
PTPN4-205ENST00000433888 PRSS56P0CW18 603 aa3.49□□□□□ -1.85
PTPN4-205ENST00000433888 ZNF26P17031 533 aaPredicted RBP3.49□□□□□ -1.85
PTPN4-205ENST00000433888 RUNX1T1Q06455 604 aa3.49□□□□□ -1.85
PTPN4-205ENST00000433888 UBE4AQ14139 1066 aa3.49□□□□□ -1.85
PTPN4-205ENST00000433888 RNPS1Q15287 305 aaKnown RBP3.49□□□□□ -1.85
PTPN4-205ENST00000433888 GGNBP1Q5YKI7 109 aa3.49□□□□□ -1.85
PTPN4-205ENST00000433888 DUS1LQ6P1R4 473 aaKnown RBP3.49□□□□□ -1.85
PTPN4-205ENST00000433888 TDRPQ86YL5 185 aa3.49□□□□□ -1.85
PTPN4-205ENST00000433888 C2CD5Q86YS7 1000 aa3.49□□□□□ -1.85
PTPN4-205ENST00000433888 STPG4Q8N801 248 aa3.49□□□□□ -1.85
PTPN4-205ENST00000433888 TM9SF4Q92544 642 aa3.49□□□□□ -1.85
PTPN4-205ENST00000433888 NEURL2Q9BR09 285 aa3.49□□□□□ -1.85
PTPN4-205ENST00000433888 TFB2MQ9H5Q4 396 aaKnown RBP3.49□□□□□ -1.85
PTPN4-205ENST00000433888 BPIFA1Q9NP55 256 aa3.49□□□□□ -1.85
PTPN4-205ENST00000433888 C20orf141Q9NUB4 165 aa3.49□□□□□ -1.85
PTPN4-205ENST00000433888 PADI3Q9ULW8 664 aa3.49□□□□□ -1.85
PTPN4-205ENST00000433888 HHLA1C9JL84 531 aa3.48□□□□□ -1.85
PTPN4-205ENST00000433888 CTSVO60911 334 aa3.48□□□□□ -1.85
PTPN4-205ENST00000433888 IGLV1-44P01699 117 aa3.48□□□□□ -1.85
PTPN4-205ENST00000433888 CD48P09326 243 aa3.48□□□□□ -1.85
PTPN4-205ENST00000433888 FAM106CPP0CH98 169 aa3.48□□□□□ -1.85
PTPN4-205ENST00000433888 POU1F1P28069 291 aa3.48□□□□□ -1.85
PTPN4-205ENST00000433888 HOXC8P31273 242 aa3.48□□□□□ -1.85
PTPN4-205ENST00000433888 KRT9P35527 623 aa3.48□□□□□ -1.85
PTPN4-205ENST00000433888 GPD2P43304 727 aa3.48□□□□□ -1.85
PTPN4-205ENST00000433888 IRX1P78414 480 aaPredicted RBP3.48□□□□□ -1.85
PTPN4-205ENST00000433888 ZNF766Q5HY98 468 aa3.48□□□□□ -1.85
PTPN4-205ENST00000433888 FBXO47Q5MNV8 452 aa3.48□□□□□ -1.85
PTPN4-205ENST00000433888 ANKRD45Q5TZF3 282 aa3.48□□□□□ -1.85
PTPN4-205ENST00000433888 TMEM81Q6P7N7 255 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms