RNA–Protein interactions for RNA: ENST00000428843.5

PTPN18-205, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-205ENST00000428843 TSHRP16473 764 aa22.24■■□□□ 1.15
PTPN18-205ENST00000428843 TRIM23P36406 574 aa22.24■■□□□ 1.15
PTPN18-205ENST00000428843 MAGEA6P43360 314 aa22.24■■□□□ 1.15
PTPN18-205ENST00000428843 ATXN3P54252 364 aaPredicted RBP22.24■■□□□ 1.15
PTPN18-205ENST00000428843 CDK16Q00536 496 aa22.24■■□□□ 1.15
PTPN18-205ENST00000428843 PDE1CQ14123 709 aaPredicted RBP22.24■■□□□ 1.15
PTPN18-205ENST00000428843 DHX34Q14147 1143 aaKnown RBP22.24■■□□□ 1.15
PTPN18-205ENST00000428843 WHAMMP3Q1A5X7 153 aa22.24■■□□□ 1.15
PTPN18-205ENST00000428843 HLA-BQ31612 363 aa22.24■■□□□ 1.15
PTPN18-205ENST00000428843 HENMT1Q5T8I9 393 aaKnown RBP22.24■■□□□ 1.15
PTPN18-205ENST00000428843 ALS2CLQ60I27 953 aa22.24■■□□□ 1.15
PTPN18-205ENST00000428843 NLRP8Q86W28 1048 aa22.24■■□□□ 1.15
PTPN18-205ENST00000428843 JAMLQ86YT9 394 aa22.24■■□□□ 1.15
PTPN18-205ENST00000428843 CPT1BQ92523 772 aa22.24■■□□□ 1.15
PTPN18-205ENST00000428843 AGAP2Q99490 1192 aa22.24■■□□□ 1.15
PTPN18-205ENST00000428843 GAREM1Q9H706 876 aa22.24■■□□□ 1.15
PTPN18-205ENST00000428843 RAD18Q9NS91 495 aa22.24■■□□□ 1.15
PTPN18-205ENST00000428843 KCTD3Q9Y597 815 aa22.24■■□□□ 1.15
PTPN18-205ENST00000428843 RIF1Q5UIP0 2472 aaKnown RBP22.24■■□□□ 1.15
PTPN18-205ENST00000428843 FRYLO94915 3013 aa22.23■■□□□ 1.15
PTPN18-205ENST00000428843 C2orf81A6NN90 581 aa22.23■■□□□ 1.15
PTPN18-205ENST00000428843 CDX4O14627 284 aaPredicted RBP22.23■■□□□ 1.15
PTPN18-205ENST00000428843 TTI1O43156 1089 aa22.23■■□□□ 1.15
PTPN18-205ENST00000428843 CRTAMO95727 393 aa22.23■■□□□ 1.15
PTPN18-205ENST00000428843 LPOP22079 712 aaPredicted RBP22.23■■□□□ 1.15
PTPN18-205ENST00000428843 TEAD1P28347 426 aa22.23■■□□□ 1.15
PTPN18-205ENST00000428843 ADCY8P40145 1251 aa22.23■■□□□ 1.15
PTPN18-205ENST00000428843 GPR1P46091 355 aa22.23■■□□□ 1.15
PTPN18-205ENST00000428843 THOP1P52888 689 aa22.23■■□□□ 1.15
PTPN18-205ENST00000428843 DCDC1P59894 354 aa22.23■■□□□ 1.15
PTPN18-205ENST00000428843 PTPRCAPQ14761 206 aa22.23■■□□□ 1.15
PTPN18-205ENST00000428843 POU6F1Q14863 301 aa22.23■■□□□ 1.15
PTPN18-205ENST00000428843 CERCAMQ5T4B2 595 aa22.23■■□□□ 1.15
PTPN18-205ENST00000428843 ANKRD22Q5VYY1 191 aa22.23■■□□□ 1.15
PTPN18-205ENST00000428843 MINDY1Q8N5J2 469 aa22.23■■□□□ 1.15
PTPN18-205ENST00000428843 FUBP1Q96AE4 644 aaKnown RBP22.23■■□□□ 1.15
PTPN18-205ENST00000428843 TRIM51Q9BSJ1 452 aa22.23■■□□□ 1.15
PTPN18-205ENST00000428843 CDH19Q9H159 772 aa22.23■■□□□ 1.15
PTPN18-205ENST00000428843 WDR26Q9H7D7 661 aa22.23■■□□□ 1.15
PTPN18-205ENST00000428843 IL21RQ9HBE5 538 aa22.23■■□□□ 1.15
PTPN18-205ENST00000428843 NFKBIL1Q9UBC1 381 aaPredicted RBP22.23■■□□□ 1.15
PTPN18-205ENST00000428843 PKP3Q9Y446 797 aa22.23■■□□□ 1.15
PTPN18-205ENST00000428843 MRFAP1Q9Y605 127 aa22.23■■□□□ 1.15
PTPN18-205ENST00000428843 ZNF106Q9H2Y7 1883 aaKnown RBP22.22■■□□□ 1.15
PTPN18-205ENST00000428843 KNL1Q8NG31 2342 aa22.22■■□□□ 1.15
PTPN18-205ENST00000428843 SPTY2D1-AS1A0A0U1RR47 76 aa22.22■■□□□ 1.15
PTPN18-205ENST00000428843 STX7O15400 261 aaKnown RBP22.22■■□□□ 1.15
PTPN18-205ENST00000428843 CER1O95813 267 aa22.22■■□□□ 1.15
PTPN18-205ENST00000428843 TUBB2AQ13885 445 aa22.22■■□□□ 1.15
PTPN18-205ENST00000428843 SEPT6Q14141 434 aa22.22■■□□□ 1.15
PTPN18-205ENST00000428843 FZD2Q14332 565 aa22.22■■□□□ 1.15
PTPN18-205ENST00000428843 NFATC4Q14934 902 aa22.22■■□□□ 1.15
PTPN18-205ENST00000428843 ZNF423Q2M1K9 1284 aa22.22■■□□□ 1.15
PTPN18-205ENST00000428843 PRAMEF14Q5SWL7 426 aa22.22■■□□□ 1.15
PTPN18-205ENST00000428843 HEATR4Q86WZ0 1026 aa22.22■■□□□ 1.15
PTPN18-205ENST00000428843 OR4K2Q8NGD2 314 aa22.22■■□□□ 1.15
PTPN18-205ENST00000428843 TUBB2BQ9BVA1 445 aa22.22■■□□□ 1.15
PTPN18-205ENST00000428843 LGR4Q9BXB1 951 aa22.22■■□□□ 1.15
PTPN18-205ENST00000428843 TEX101Q9BY14 249 aa22.22■■□□□ 1.15
PTPN18-205ENST00000428843 ERVMER34-1Q9H9K5 563 aa22.22■■□□□ 1.15
PTPN18-205ENST00000428843 LDB2O43679 373 aa22.21■■□□□ 1.15
PTPN18-205ENST00000428843 TMEM63AO94886 807 aa22.21■■□□□ 1.15
PTPN18-205ENST00000428843 PYGLP06737 847 aa22.21■■□□□ 1.15
PTPN18-205ENST00000428843 HOXC4P09017 264 aaPredicted RBP22.21■■□□□ 1.15
PTPN18-205ENST00000428843 ZNF140P52738 457 aaPredicted RBP22.21■■□□□ 1.15
PTPN18-205ENST00000428843 KIAA1024LP59773 190 aa22.21■■□□□ 1.15
PTPN18-205ENST00000428843 PDE1BQ01064 536 aa22.21■■□□□ 1.15
PTPN18-205ENST00000428843 PTK2BQ14289 1009 aa22.21■■□□□ 1.15
PTPN18-205ENST00000428843 ADAMTSL4Q6UY14 1074 aa22.21■■□□□ 1.15
PTPN18-205ENST00000428843 MACC1Q6ZN28 852 aa22.21■■□□□ 1.15
PTPN18-205ENST00000428843 ZNF534Q76KX8 674 aa22.21■■□□□ 1.15
PTPN18-205ENST00000428843 PLEKHG4BQ96PX9 1271 aa22.21■■□□□ 1.15
PTPN18-205ENST00000428843 ELF4Q99607 663 aaPredicted RBP22.21■■□□□ 1.15
PTPN18-205ENST00000428843 SPATA16Q9BXB7 569 aa22.21■■□□□ 1.15
PTPN18-205ENST00000428843 TMEM9BQ9NQ34 198 aa22.21■■□□□ 1.15
PTPN18-205ENST00000428843 FNDC3AQ9Y2H6 1198 aaKnown RBP22.21■■□□□ 1.15
PTPN18-205ENST00000428843 FADS2P1A8MWK0 482 aa22.2■■□□□ 1.14
PTPN18-205ENST00000428843 CACNB4O00305 520 aaPredicted RBP22.2■■□□□ 1.14
PTPN18-205ENST00000428843 DNALI1O14645 258 aaPredicted RBP22.2■■□□□ 1.14
PTPN18-205ENST00000428843 PPFIA2O75334 1257 aa22.2■■□□□ 1.14
PTPN18-205ENST00000428843 IVDP26440 423 aa22.2■■□□□ 1.14
PTPN18-205ENST00000428843 SPAM1P38567 509 aa22.2■■□□□ 1.14
PTPN18-205ENST00000428843 SESN2P58004 480 aaPredicted RBP22.2■■□□□ 1.14
PTPN18-205ENST00000428843 MRPS25P82663 173 aaKnown RBP22.2■■□□□ 1.14
PTPN18-205ENST00000428843 CDK3Q00526 305 aa22.2■■□□□ 1.14
PTPN18-205ENST00000428843 RNASEH2BQ5TBB1 312 aaKnown RBP22.2■■□□□ 1.14
PTPN18-205ENST00000428843 ZDHHC20Q5W0Z9 365 aa22.2■■□□□ 1.14
PTPN18-205ENST00000428843 LRRC8BQ6P9F7 803 aa22.2■■□□□ 1.14
PTPN18-205ENST00000428843 PPIL6Q8IXY8 311 aa22.2■■□□□ 1.14
PTPN18-205ENST00000428843 OXR1Q8N573 874 aa22.2■■□□□ 1.14
PTPN18-205ENST00000428843 TRAM1L1Q8N609 369 aa22.2■■□□□ 1.14
PTPN18-205ENST00000428843 NAT8LQ8N9F0 302 aa22.2■■□□□ 1.14
PTPN18-205ENST00000428843 OR13C4Q8NGS5 318 aa22.2■■□□□ 1.14
PTPN18-205ENST00000428843 IL26Q9NPH9 171 aa22.2■■□□□ 1.14
PTPN18-205ENST00000428843 PHPT1Q9NRX4 125 aaPredicted RBP22.2■■□□□ 1.14
PTPN18-205ENST00000428843 DNAAF2Q9NVR5 837 aaKnown RBP22.2■■□□□ 1.14
PTPN18-205ENST00000428843 LOC105378220A0A1B0GUY1 285 aaPredicted RBP22.19■■□□□ 1.14
PTPN18-205ENST00000428843 FAM187AA6NFU0 413 aa22.19■■□□□ 1.14
PTPN18-205ENST00000428843 AP3B1O00203 1094 aa22.19■■□□□ 1.14
PTPN18-205ENST00000428843 INPP4BO15327 924 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms