RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 CELSR3Q9NYQ7 3312 aa5.14□□□□□ -1.59
RIF1-203ENST00000428287 H0YIN7 160 aa5.14□□□□□ -1.59
RIF1-203ENST00000428287 SLC1A7O00341 560 aa5.14□□□□□ -1.59
RIF1-203ENST00000428287 UBL4AP11441 157 aa5.14□□□□□ -1.59
RIF1-203ENST00000428287 CTRB1P17538 263 aa5.14□□□□□ -1.59
RIF1-203ENST00000428287 HDCP19113 662 aa5.14□□□□□ -1.59
RIF1-203ENST00000428287 MZF1P28698 734 aaPredicted RBP5.14□□□□□ -1.59
RIF1-203ENST00000428287 ARL2P36404 184 aa5.14□□□□□ -1.59
RIF1-203ENST00000428287 GSK3BP49841 420 aa5.14□□□□□ -1.59
RIF1-203ENST00000428287 SLC26A2P50443 739 aa5.14□□□□□ -1.59
RIF1-203ENST00000428287 PIK3R6Q5UE93 754 aa5.14□□□□□ -1.59
RIF1-203ENST00000428287 CTRB2Q6GPI1 263 aa5.14□□□□□ -1.59
RIF1-203ENST00000428287 STRA8Q7Z7C7 330 aa5.14□□□□□ -1.59
RIF1-203ENST00000428287 RIMKLAQ8IXN7 391 aa5.14□□□□□ -1.59
RIF1-203ENST00000428287 TMEM125Q96AQ2 219 aa5.14□□□□□ -1.59
RIF1-203ENST00000428287 CSPG4P5Q96PW8 444 aa5.14□□□□□ -1.59
RIF1-203ENST00000428287 SNRNP25Q9BV90 132 aaKnown RBP5.14□□□□□ -1.59
RIF1-203ENST00000428287 AMBRA1Q9C0C7 1298 aa5.14□□□□□ -1.59
RIF1-203ENST00000428287 TRPV6Q9H1D0 765 aa5.14□□□□□ -1.59
RIF1-203ENST00000428287 GGA3Q9NZ52 723 aa5.14□□□□□ -1.59
RIF1-203ENST00000428287 BFARQ9NZS9 450 aa5.14□□□□□ -1.59
RIF1-203ENST00000428287 SFMBT1Q9UHJ3 866 aa5.14□□□□□ -1.59
RIF1-203ENST00000428287 SIX4Q9UIU6 781 aa5.14□□□□□ -1.59
RIF1-203ENST00000428287 EVPLLA8MZ36 301 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 CACNA1GO43497 2377 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 KCNK2O95069 426 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 KRT19P08727 400 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 ATP5F1P24539 256 aaPredicted RBP5.13□□□□□ -1.59
RIF1-203ENST00000428287 RRM2P31350 389 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 STX1BP61266 288 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 CD47Q08722 323 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 DAG1Q14118 895 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 CCDC81Q6ZN84 652 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 SLC43A3Q8NBI5 491 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 EXPH5Q8NEV8 1989 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 OR9I1Q8NGQ6 314 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 REXO5Q96IC2 774 aaKnown RBP5.13□□□□□ -1.59
RIF1-203ENST00000428287 CDADC1Q9BWV3 514 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 ARNT2Q9HBZ2 717 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 PCSK1NQ9UHG2 260 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 PCDHGA3Q9Y5H0 932 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 HSPE1-MOB4S4R3N1 261 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 CLDN24A6NM45 220 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 TBKBP1A7MCY6 615 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 NOTOA8MTQ0 251 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 PHGDHO43175 533 aaKnown RBP5.13□□□□□ -1.59
RIF1-203ENST00000428287 CHMP2AO43633 222 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 FYNP06241 537 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 ERVK-10P10266 1014 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 PDGFRAP16234 1089 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 KCNA2P16389 499 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 POLR2CP19387 275 aaPredicted RBP5.13□□□□□ -1.59
RIF1-203ENST00000428287 GLUD2P49448 558 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 CLCNKBP51801 687 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 YBX1P67809 324 aaKnown RBP5.13□□□□□ -1.59
RIF1-203ENST00000428287 CTAG1AP78358 180 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 GPR50Q13585 617 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 DDR2Q16832 855 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 ERAP2Q6P179 960 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 PTAR1Q7Z6K3 402 aaPredicted RBP5.13□□□□□ -1.59
RIF1-203ENST00000428287 DEPDC1BQ8WUY9 529 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 P2RY11Q96G91 374 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 FBXL20Q96IG2 436 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 SLC39A3Q9BRY0 314 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 BEGAINQ9BUH8 593 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 IL20Q9NYY1 176 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 DAPK2Q9UIK4 370 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 GPR45Q9Y5Y3 372 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 AP3B1O00203 1094 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 POLR1CO15160 346 aaPredicted RBP5.13□□□□□ -1.59
RIF1-203ENST00000428287 MTSS1O43312 755 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 TULP3O75386 442 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 KRT6AP02538 564 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 KRT6BP04259 564 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 INPP5AQ14642 412 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 PGS1Q32NB8 556 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 CCBE1Q6UXH8 406 aaPredicted RBP5.13□□□□□ -1.59
RIF1-203ENST00000428287 GALNT7Q86SF2 657 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 LSMEM1Q8N8F7 131 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 SYTL5Q8TDW5 730 aaPredicted RBP5.13□□□□□ -1.59
RIF1-203ENST00000428287 UBXN8O00124 270 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 F9P00740 461 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 CHRNB1P11230 501 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 MAGEA2P43356 314 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 ALDH7A1P49419 539 aaKnown RBP5.13□□□□□ -1.59
RIF1-203ENST00000428287 NFKB2Q00653 900 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 XKR3Q5GH77 459 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 MLIPQ5VWP3 458 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 ABHD15Q6UXT9 468 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 CCDC149Q6ZUS6 474 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 ZDHHC17Q8IUH5 632 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 CDKL3Q8IVW4 592 aaPredicted RBP5.13□□□□□ -1.59
RIF1-203ENST00000428287 PCDH20Q8N6Y1 951 aaKnown RBP5.13□□□□□ -1.59
RIF1-203ENST00000428287 LINC00116Q8NCU8 138 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 FAM110BQ8TC76 370 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 YIPF6Q96EC8 236 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 CCDC115Q96NT0 180 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 OSGIN1Q9UJX0 560 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 TLR6Q9Y2C9 796 aa5.13□□□□□ -1.59
RIF1-203ENST00000428287 ACOT9Q9Y305 439 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms