RNA–Protein interactions for RNA: ENST00000428101.6

LMO1-202, Transcript of LIM domain only 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LMO1, Length 1,038 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1-202ENST00000428101 ZNF30P17039 623 aa27.14■■□□□ 1.94
LMO1-202ENST00000428101 AK4P27144 223 aaPredicted RBP27.14■■□□□ 1.94
LMO1-202ENST00000428101 CCKBRP32239 447 aa27.14■■□□□ 1.94
LMO1-202ENST00000428101 MLLT3P42568 568 aaPredicted RBP27.14■■□□□ 1.94
LMO1-202ENST00000428101 GPR1P46091 355 aa27.14■■□□□ 1.94
LMO1-202ENST00000428101 EPHB1P54762 984 aa27.14■■□□□ 1.94
LMO1-202ENST00000428101 INHBCP55103 352 aa27.14■■□□□ 1.94
LMO1-202ENST00000428101 ZFYVE27Q5T4F4 411 aa27.14■■□□□ 1.94
LMO1-202ENST00000428101 ADAMTSL4Q6UY14 1074 aa27.14■■□□□ 1.94
LMO1-202ENST00000428101 NLRP8Q86W28 1048 aa27.14■■□□□ 1.94
LMO1-202ENST00000428101 CCDC13Q8IYE1 715 aa27.14■■□□□ 1.94
LMO1-202ENST00000428101 PLD5Q8N7P1 536 aa27.14■■□□□ 1.94
LMO1-202ENST00000428101 KIAA1524Q8TCG1 905 aa27.14■■□□□ 1.94
LMO1-202ENST00000428101 SCARF2Q96GP6 870 aaPredicted RBP27.14■■□□□ 1.94
LMO1-202ENST00000428101 GSDMCQ9BYG8 508 aa27.14■■□□□ 1.94
LMO1-202ENST00000428101 EPB41L5Q9HCM4 733 aa27.14■■□□□ 1.94
LMO1-202ENST00000428101 SPTLC3Q9NUV7 552 aa27.14■■□□□ 1.94
LMO1-202ENST00000428101 TAAR2Q9P1P5 351 aa27.14■■□□□ 1.94
LMO1-202ENST00000428101 ZFC3H1O60293 1989 aaKnown RBP27.13■■□□□ 1.93
LMO1-202ENST00000428101 CAPN8A6NHC0 703 aa27.13■■□□□ 1.93
LMO1-202ENST00000428101 C3orf70A6NLC5 250 aaPredicted RBP27.13■■□□□ 1.93
LMO1-202ENST00000428101 TMX2-CTNND1H3BSU7 103 aa27.13■■□□□ 1.93
LMO1-202ENST00000428101 PLD2O14939 933 aa27.13■■□□□ 1.93
LMO1-202ENST00000428101 ITGA2BP08514 1039 aa27.13■■□□□ 1.93
LMO1-202ENST00000428101 STC1P52823 247 aa27.13■■□□□ 1.93
LMO1-202ENST00000428101 MAZP56270 477 aaKnown RBP27.13■■□□□ 1.93
LMO1-202ENST00000428101 ZFP36L1Q07352 338 aaKnown RBP27.13■■□□□ 1.93
LMO1-202ENST00000428101 ILF3Q12906 894 aaKnown RBP eCLIP27.13■■□□□ 1.93
LMO1-202ENST00000428101 BROXQ5VW32 411 aa27.13■■□□□ 1.93
LMO1-202ENST00000428101 RAB11FIP2Q7L804 512 aa27.13■■□□□ 1.93
LMO1-202ENST00000428101 FBXO39Q8N4B4 442 aa27.13■■□□□ 1.93
LMO1-202ENST00000428101 CCNYQ8ND76 341 aa27.13■■□□□ 1.93
LMO1-202ENST00000428101 ZDHHC1Q8WTX9 485 aa27.13■■□□□ 1.93
LMO1-202ENST00000428101 TMEM74Q96NL1 305 aa27.13■■□□□ 1.93
LMO1-202ENST00000428101 AGAP2Q99490 1192 aa27.13■■□□□ 1.93
LMO1-202ENST00000428101 NHEJ1Q9H9Q4 299 aaPredicted RBP27.13■■□□□ 1.93
LMO1-202ENST00000428101 CPNE5Q9HCH3 593 aa27.13■■□□□ 1.93
LMO1-202ENST00000428101 HAUS2Q9NVX0 235 aa27.13■■□□□ 1.93
LMO1-202ENST00000428101 ATMQ13315 3056 aa27.13■■□□□ 1.93
LMO1-202ENST00000428101 TEX51A0A1B0GUA7 166 aa27.12■■□□□ 1.93
LMO1-202ENST00000428101 MFAP3LO75121 409 aa27.12■■□□□ 1.93
LMO1-202ENST00000428101 MMP2P08253 660 aa27.12■■□□□ 1.93
LMO1-202ENST00000428101 ADCY8P40145 1251 aa27.12■■□□□ 1.93
LMO1-202ENST00000428101 B4GALNT1Q00973 533 aa27.12■■□□□ 1.93
LMO1-202ENST00000428101 CTBSQ01459 385 aa27.12■■□□□ 1.93
LMO1-202ENST00000428101 PPIDQ08752 370 aaKnown RBP27.12■■□□□ 1.93
LMO1-202ENST00000428101 EIF3IQ13347 325 aaKnown RBP27.12■■□□□ 1.93
LMO1-202ENST00000428101 DOK6Q6PKX4 331 aa27.12■■□□□ 1.93
LMO1-202ENST00000428101 ZNF765Q7L2R6 523 aa27.12■■□□□ 1.93
LMO1-202ENST00000428101 TMPRSS9Q7Z410 1059 aa27.12■■□□□ 1.93
LMO1-202ENST00000428101 STRADBQ9C0K7 418 aa27.12■■□□□ 1.93
LMO1-202ENST00000428101 PCDH9Q9HC56 1237 aa27.12■■□□□ 1.93
LMO1-202ENST00000428101 TMEM98Q9Y2Y6 226 aa27.12■■□□□ 1.93
LMO1-202ENST00000428101 LRRD1A4D1F6 860 aa27.11■■□□□ 1.93
LMO1-202ENST00000428101 ZNF487B1APH4 448 aa27.11■■□□□ 1.93
LMO1-202ENST00000428101 KCNK1O00180 336 aa27.11■■□□□ 1.93
LMO1-202ENST00000428101 ATXN7O15265 892 aaPredicted RBP27.11■■□□□ 1.93
LMO1-202ENST00000428101 MTA2O94776 668 aa27.11■■□□□ 1.93
LMO1-202ENST00000428101 CLDN7O95471 211 aa27.11■■□□□ 1.93
LMO1-202ENST00000428101 JCHAINP01591 159 aa27.11■■□□□ 1.93
LMO1-202ENST00000428101 UGT1A5P35504 534 aa27.11■■□□□ 1.93
LMO1-202ENST00000428101 ARHGAP25P42331 645 aa27.11■■□□□ 1.93
LMO1-202ENST00000428101 UCNP55089 124 aa27.11■■□□□ 1.93
LMO1-202ENST00000428101 TMPRSS3P57727 454 aa27.11■■□□□ 1.93
LMO1-202ENST00000428101 RPL26P61254 145 aaKnown RBP27.11■■□□□ 1.93
LMO1-202ENST00000428101 FAM182AQ5T1J6 154 aa27.11■■□□□ 1.93
LMO1-202ENST00000428101 SLC9A4Q6AI14 798 aa27.11■■□□□ 1.93
LMO1-202ENST00000428101 SLC30A9Q6PML9 568 aa27.11■■□□□ 1.93
LMO1-202ENST00000428101 ZNF438Q7Z4V0 828 aa27.11■■□□□ 1.93
LMO1-202ENST00000428101 TRIM74Q86UV6 250 aa27.11■■□□□ 1.93
LMO1-202ENST00000428101 NRSN1Q8IZ57 195 aa27.11■■□□□ 1.93
LMO1-202ENST00000428101 CNTD1Q8N815 330 aa27.11■■□□□ 1.93
LMO1-202ENST00000428101 LPCAT1Q8NF37 534 aa27.11■■□□□ 1.93
LMO1-202ENST00000428101 CCDC42Q96M95 316 aa27.11■■□□□ 1.93
LMO1-202ENST00000428101 LYSMD1Q96S90 227 aa27.11■■□□□ 1.93
LMO1-202ENST00000428101 TSPY26PQ9H489 355 aa27.11■■□□□ 1.93
LMO1-202ENST00000428101 DNPEPQ9ULA0 475 aa27.11■■□□□ 1.93
LMO1-202ENST00000428101 RPL26L1Q9UNX3 145 aaKnown RBP27.11■■□□□ 1.93
LMO1-202ENST00000428101 PLEKHM1Q9Y4G2 1056 aa27.11■■□□□ 1.93
LMO1-202ENST00000428101 B4GAT1O43505 415 aa27.1■■□□□ 1.93
LMO1-202ENST00000428101 ECEL1O95672 775 aa27.1■■□□□ 1.93
LMO1-202ENST00000428101 HGFP14210 728 aa27.1■■□□□ 1.93
LMO1-202ENST00000428101 CA4P22748 312 aa27.1■■□□□ 1.93
LMO1-202ENST00000428101 ZBTB17Q13105 803 aa27.1■■□□□ 1.93
LMO1-202ENST00000428101 VSIG1Q86XK7 387 aa27.1■■□□□ 1.93
LMO1-202ENST00000428101 CCDC97Q96F63 343 aaPredicted RBP27.1■■□□□ 1.93
LMO1-202ENST00000428101 COX14Q96I36 57 aa27.1■■□□□ 1.93
LMO1-202ENST00000428101 RIOK2Q9BVS4 552 aaKnown RBP27.1■■□□□ 1.93
LMO1-202ENST00000428101 AHCTF1Q8WYP5 2266 aa27.1■■□□□ 1.93
LMO1-202ENST00000428101 EIF4E1BA6NMX2 242 aaKnown RBP27.09■■□□□ 1.93
LMO1-202ENST00000428101 TPM1P09493 284 aa27.09■■□□□ 1.93
LMO1-202ENST00000428101 CD86P42081 329 aa27.09■■□□□ 1.93
LMO1-202ENST00000428101 IFI35P80217 286 aaPredicted RBP27.09■■□□□ 1.93
LMO1-202ENST00000428101 NR1D2Q14995 579 aa27.09■■□□□ 1.93
LMO1-202ENST00000428101 QPCTQ16769 361 aa27.09■■□□□ 1.93
LMO1-202ENST00000428101 ARHGAP40Q5TG30 622 aa27.09■■□□□ 1.93
LMO1-202ENST00000428101 PCSK4Q6UW60 755 aa27.09■■□□□ 1.93
LMO1-202ENST00000428101 SLITRK4Q8IW52 837 aa27.09■■□□□ 1.93
LMO1-202ENST00000428101 RHOT2Q8IXI1 618 aa27.09■■□□□ 1.93
LMO1-202ENST00000428101 RAVER1Q8IY67 606 aaKnown RBP27.09■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms