RNA–Protein interactions for RNA: ENST00000426196.5

HDAC6-206, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-206ENST00000426196 ERRFI1Q9UJM3 462 aaPredicted RBP14.12□□□□□ -0.15
HDAC6-206ENST00000426196 SLC17A4Q9Y2C5 497 aa14.12□□□□□ -0.15
HDAC6-206ENST00000426196 TRBV23OR9-2A0A075B6M9 112 aa14.11□□□□□ -0.15
HDAC6-206ENST00000426196 LRCH4O75427 683 aa14.11□□□□□ -0.15
HDAC6-206ENST00000426196 FGFR1OPO95684 399 aaKnown RBP14.11□□□□□ -0.15
HDAC6-206ENST00000426196 LSM8O95777 96 aaKnown RBP14.11□□□□□ -0.15
HDAC6-206ENST00000426196 PNMA6AP0CW24 399 aaPredicted RBP14.11□□□□□ -0.15
HDAC6-206ENST00000426196 MAPK9P45984 424 aa14.11□□□□□ -0.15
HDAC6-206ENST00000426196 POLD2P49005 469 aa14.11□□□□□ -0.15
HDAC6-206ENST00000426196 STX17P56962 302 aa14.11□□□□□ -0.15
HDAC6-206ENST00000426196 NFATC2Q13469 925 aa14.11□□□□□ -0.15
HDAC6-206ENST00000426196 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.11□□□□□ -0.15
HDAC6-206ENST00000426196 RAET1GQ6H3X3 334 aa14.11□□□□□ -0.15
HDAC6-206ENST00000426196 STRADAQ7RTN6 431 aa14.11□□□□□ -0.15
HDAC6-206ENST00000426196 FAM71AQ8IYT1 594 aa14.11□□□□□ -0.15
HDAC6-206ENST00000426196 SLC34A3Q8N130 599 aa14.11□□□□□ -0.15
HDAC6-206ENST00000426196 SFRP1Q8N474 314 aa14.11□□□□□ -0.15
HDAC6-206ENST00000426196 CCDC185Q8N715 623 aa14.11□□□□□ -0.15
HDAC6-206ENST00000426196 PTCD2Q8WV60 388 aaKnown RBP14.11□□□□□ -0.15
HDAC6-206ENST00000426196 SEC14L1Q92503 715 aa14.11□□□□□ -0.15
HDAC6-206ENST00000426196 SH3KBP1Q96B97 665 aa14.11□□□□□ -0.15
HDAC6-206ENST00000426196 C5orf34Q96MH7 638 aa14.11□□□□□ -0.15
HDAC6-206ENST00000426196 TRIM55Q9BYV6 548 aa14.11□□□□□ -0.15
HDAC6-206ENST00000426196 CATSPERBQ9H7T0 1116 aa14.11□□□□□ -0.15
HDAC6-206ENST00000426196 SARS2Q9NP81 518 aaKnown RBP14.11□□□□□ -0.15
HDAC6-206ENST00000426196 SIDT1Q9NXL6 827 aaKnown RBP14.11□□□□□ -0.15
HDAC6-206ENST00000426196 B4GALT6Q9UBX8 382 aa14.11□□□□□ -0.15
HDAC6-206ENST00000426196 DNAJC12Q9UKB3 198 aa14.11□□□□□ -0.15
HDAC6-206ENST00000426196 MAN1B1Q9UKM7 699 aa14.11□□□□□ -0.15
HDAC6-206ENST00000426196 PLEKHM1Q9Y4G2 1056 aa14.11□□□□□ -0.15
HDAC6-206ENST00000426196 PCDHGA9Q9Y5G4 932 aaKnown RBP14.11□□□□□ -0.15
HDAC6-206ENST00000426196 PCDHGA6Q9Y5G7 932 aa14.11□□□□□ -0.15
HDAC6-206ENST00000426196 POLEQ07864 2286 aa14.11□□□□□ -0.15
HDAC6-206ENST00000426196 GTPBP10A4D1E9 387 aaKnown RBP14.1□□□□□ -0.15
HDAC6-206ENST00000426196 ANKRD34CP0C6C1 535 aa14.1□□□□□ -0.15
HDAC6-206ENST00000426196 CCNYL3P0C7X3 344 aa14.1□□□□□ -0.15
HDAC6-206ENST00000426196 ZNF28P17035 718 aa14.1□□□□□ -0.15
HDAC6-206ENST00000426196 PON1P27169 355 aa14.1□□□□□ -0.15
HDAC6-206ENST00000426196 TEAD1P28347 426 aa14.1□□□□□ -0.15
HDAC6-206ENST00000426196 GARSP41250 739 aaKnown RBP14.1□□□□□ -0.15
HDAC6-206ENST00000426196 EPHA4P54764 986 aa14.1□□□□□ -0.15
HDAC6-206ENST00000426196 PAK1Q13153 545 aa14.1□□□□□ -0.15
HDAC6-206ENST00000426196 DNASE1L3Q13609 305 aa14.1□□□□□ -0.15
HDAC6-206ENST00000426196 LRP8Q14114 963 aa14.1□□□□□ -0.15
HDAC6-206ENST00000426196 NAA30Q147X3 362 aaPredicted RBP14.1□□□□□ -0.15
HDAC6-206ENST00000426196 CNGA3Q16281 694 aa14.1□□□□□ -0.15
HDAC6-206ENST00000426196 CCDC14Q49A88 953 aa14.1□□□□□ -0.15
HDAC6-206ENST00000426196 TAF3Q5VWG9 929 aa14.1□□□□□ -0.15
HDAC6-206ENST00000426196 DENND2CQ68D51 928 aa14.1□□□□□ -0.15
HDAC6-206ENST00000426196 PLXDC1Q8IUK5 500 aa14.1□□□□□ -0.15
HDAC6-206ENST00000426196 CREBRFQ8IUR6 639 aa14.1□□□□□ -0.15
HDAC6-206ENST00000426196 RASGRP3Q8IV61 690 aa14.1□□□□□ -0.15
HDAC6-206ENST00000426196 UMODL1-AS1Q8N2C9 162 aa14.1□□□□□ -0.15
HDAC6-206ENST00000426196 TSEN2Q8NCE0 465 aaKnown RBP14.1□□□□□ -0.15
HDAC6-206ENST00000426196 PDCD6IPQ8WUM4 868 aaKnown RBP14.1□□□□□ -0.15
HDAC6-206ENST00000426196 RXFP2Q8WXD0 754 aa14.1□□□□□ -0.15
HDAC6-206ENST00000426196 NTAN1Q96AB6 310 aa14.1□□□□□ -0.15
HDAC6-206ENST00000426196 RNF31Q96EP0 1072 aa14.1□□□□□ -0.15
HDAC6-206ENST00000426196 DTD2Q96FN9 168 aa14.1□□□□□ -0.15
HDAC6-206ENST00000426196 TCTN2Q96GX1 697 aa14.1□□□□□ -0.15
HDAC6-206ENST00000426196 EPB41L1Q9H4G0 881 aa14.1□□□□□ -0.15
HDAC6-206ENST00000426196 PDFQ9HBH1 243 aa14.1□□□□□ -0.15
HDAC6-206ENST00000426196 SLAMF7Q9NQ25 335 aa14.1□□□□□ -0.15
HDAC6-206ENST00000426196 LNPEPQ9UIQ6 1025 aa14.1□□□□□ -0.15
HDAC6-206ENST00000426196 AJAP1Q9UKB5 411 aaPredicted RBP14.1□□□□□ -0.15
HDAC6-206ENST00000426196 SLC5A6Q9Y289 635 aa14.1□□□□□ -0.15
HDAC6-206ENST00000426196 ATP6V1DQ9Y5K8 247 aa14.1□□□□□ -0.15
HDAC6-206ENST00000426196 PPP1R3GB7ZBB8 358 aa14.09□□□□□ -0.15
HDAC6-206ENST00000426196 J3KR12 359 aa14.09□□□□□ -0.15
HDAC6-206ENST00000426196 CREB3O43889 395 aa14.09□□□□□ -0.15
HDAC6-206ENST00000426196 PRAMEF11O60813 436 aa14.09□□□□□ -0.15
HDAC6-206ENST00000426196 PALMO75781 387 aa14.09□□□□□ -0.15
HDAC6-206ENST00000426196 KIAA0754O94854 1291 aa14.09□□□□□ -0.15
HDAC6-206ENST00000426196 NDUFA10O95299 355 aa14.09□□□□□ -0.15
HDAC6-206ENST00000426196 CYP11B1P15538 503 aa14.09□□□□□ -0.15
HDAC6-206ENST00000426196 NFKBIAP25963 317 aa14.09□□□□□ -0.15
HDAC6-206ENST00000426196 PTPN9P43378 593 aa14.09□□□□□ -0.15
HDAC6-206ENST00000426196 RGRP47804 291 aa14.09□□□□□ -0.15
HDAC6-206ENST00000426196 PRR30Q53SZ7 412 aaPredicted RBP14.09□□□□□ -0.15
HDAC6-206ENST00000426196 SLFN11Q7Z7L1 901 aa14.09□□□□□ -0.15
HDAC6-206ENST00000426196 GALNT13Q8IUC8 556 aa14.09□□□□□ -0.15
HDAC6-206ENST00000426196 TTC13Q8NBP0 860 aa14.09□□□□□ -0.15
HDAC6-206ENST00000426196 GPT2Q8TD30 523 aa14.09□□□□□ -0.15
HDAC6-206ENST00000426196 FAM172AQ8WUF8 416 aa14.09□□□□□ -0.15
HDAC6-206ENST00000426196 CPA5Q8WXQ8 436 aa14.09□□□□□ -0.15
HDAC6-206ENST00000426196 THAP4Q8WY91 577 aa14.09□□□□□ -0.15
HDAC6-206ENST00000426196 SCARF2Q96GP6 870 aaPredicted RBP14.09□□□□□ -0.15
HDAC6-206ENST00000426196 CINPQ9BW66 212 aaPredicted RBP14.09□□□□□ -0.15
HDAC6-206ENST00000426196 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.09□□□□□ -0.15
HDAC6-206ENST00000426196 GDPD2Q9HCC8 539 aa14.09□□□□□ -0.15
HDAC6-206ENST00000426196 ACSS2Q9NR19 701 aa14.09□□□□□ -0.15
HDAC6-206ENST00000426196 PADI1Q9ULC6 663 aa14.09□□□□□ -0.15
HDAC6-206ENST00000426196 ZNF451Q9Y4E5 1061 aa14.09□□□□□ -0.15
HDAC6-206ENST00000426196 MN1Q10571 1320 aaPredicted RBP14.09□□□□□ -0.15
HDAC6-206ENST00000426196 CSMD2Q7Z408 3487 aa14.09□□□□□ -0.15
HDAC6-206ENST00000426196 AKAP9Q99996 3911 aa14.09□□□□□ -0.15
HDAC6-206ENST00000426196 GOLGA6L4A6NEF3 574 aa14.08□□□□□ -0.16
HDAC6-206ENST00000426196 C2CD4BA6NLJ0 364 aa14.08□□□□□ -0.16
HDAC6-206ENST00000426196 WASH4PA8MWX3 477 aa14.08□□□□□ -0.16
HDAC6-206ENST00000426196 C21orf140B9A014 251 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms