RNA–Protein interactions for RNA: ENST00000425815.5

SMARCAL1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 310 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-205ENST00000425815 ARL10Q8N8L6 244 aa18.27■□□□□ 0.52
SMARCAL1-205ENST00000425815 LRRC57Q8N9N7 239 aa18.27■□□□□ 0.52
SMARCAL1-205ENST00000425815 GPBAR1Q8TDU6 330 aa18.27■□□□□ 0.52
SMARCAL1-205ENST00000425815 TFB1MQ8WVM0 346 aaKnown RBP18.27■□□□□ 0.52
SMARCAL1-205ENST00000425815 SCG3Q8WXD2 468 aaKnown RBP18.27■□□□□ 0.52
SMARCAL1-205ENST00000425815 GLMNQ92990 594 aa18.27■□□□□ 0.52
SMARCAL1-205ENST00000425815 SCARF2Q96GP6 870 aaPredicted RBP18.27■□□□□ 0.52
SMARCAL1-205ENST00000425815 RIOK2Q9BVS4 552 aaKnown RBP18.27■□□□□ 0.52
SMARCAL1-205ENST00000425815 ABCG4Q9H172 646 aa18.27■□□□□ 0.52
SMARCAL1-205ENST00000425815 LUC7LQ9NQ29 371 aaKnown RBP18.27■□□□□ 0.52
SMARCAL1-205ENST00000425815 EVA1BQ9NVM1 165 aa18.27■□□□□ 0.52
SMARCAL1-205ENST00000425815 SUFUQ9UMX1 484 aa18.27■□□□□ 0.52
SMARCAL1-205ENST00000425815 SHROOM3Q8TF72 1996 aa18.27■□□□□ 0.52
SMARCAL1-205ENST00000425815 GOLGA6CA6NDK9 693 aa18.26■□□□□ 0.51
SMARCAL1-205ENST00000425815 GOLGA6BA6NDN3 693 aa18.26■□□□□ 0.51
SMARCAL1-205ENST00000425815 NOBOXO60393 691 aa18.26■□□□□ 0.51
SMARCAL1-205ENST00000425815 GOLGA6DP0CG33 693 aa18.26■□□□□ 0.51
SMARCAL1-205ENST00000425815 CDC25BP30305 580 aa18.26■□□□□ 0.51
SMARCAL1-205ENST00000425815 SPINT3P49223 89 aa18.26■□□□□ 0.51
SMARCAL1-205ENST00000425815 VAV2P52735 878 aa18.26■□□□□ 0.51
SMARCAL1-205ENST00000425815 PPP2R5EQ16537 467 aa18.26■□□□□ 0.51
SMARCAL1-205ENST00000425815 BBS12Q6ZW61 710 aa18.26■□□□□ 0.51
SMARCAL1-205ENST00000425815 TAF8Q7Z7C8 310 aa18.26■□□□□ 0.51
SMARCAL1-205ENST00000425815 ZC3H18Q86VM9 953 aaKnown RBP18.26■□□□□ 0.51
SMARCAL1-205ENST00000425815 P3H4Q92791 437 aa18.26■□□□□ 0.51
SMARCAL1-205ENST00000425815 HAUS1Q96CS2 278 aa18.26■□□□□ 0.51
SMARCAL1-205ENST00000425815 COX14Q96I36 57 aa18.26■□□□□ 0.51
SMARCAL1-205ENST00000425815 RBM41Q96IZ5 413 aaKnown RBP18.26■□□□□ 0.51
SMARCAL1-205ENST00000425815 CALR3Q96L12 384 aaKnown RBP18.26■□□□□ 0.51
SMARCAL1-205ENST00000425815 CCDC3Q9BQI4 270 aa18.26■□□□□ 0.51
SMARCAL1-205ENST00000425815 ANP32EQ9BTT0 268 aa18.26■□□□□ 0.51
SMARCAL1-205ENST00000425815 C10orf88Q9H8K7 445 aa18.26■□□□□ 0.51
SMARCAL1-205ENST00000425815 CARS2Q9HA77 564 aaKnown RBP18.26■□□□□ 0.51
SMARCAL1-205ENST00000425815 SPATS2LQ9NUQ6 558 aaKnown RBP18.26■□□□□ 0.51
SMARCAL1-205ENST00000425815 GOLGA6AQ9NYA3 693 aa18.26■□□□□ 0.51
SMARCAL1-205ENST00000425815 MOSPD1Q9UJG1 213 aa18.26■□□□□ 0.51
SMARCAL1-205ENST00000425815 DNPEPQ9ULA0 475 aa18.26■□□□□ 0.51
SMARCAL1-205ENST00000425815 TMEM98Q9Y2Y6 226 aa18.26■□□□□ 0.51
SMARCAL1-205ENST00000425815 C1orf232A0A0U1RR37 186 aa18.25■□□□□ 0.51
SMARCAL1-205ENST00000425815 A0A1W2PNU3 283 aaPredicted RBP18.25■□□□□ 0.51
SMARCAL1-205ENST00000425815 GRID2IPA4D2P6 1211 aa18.25■□□□□ 0.51
SMARCAL1-205ENST00000425815 NTN3O00634 580 aaPredicted RBP18.25■□□□□ 0.51
SMARCAL1-205ENST00000425815 IVLP07476 585 aa18.25■□□□□ 0.51
SMARCAL1-205ENST00000425815 CTNNA2P26232 953 aa18.25■□□□□ 0.51
SMARCAL1-205ENST00000425815 CDK18Q07002 472 aa18.25■□□□□ 0.51
SMARCAL1-205ENST00000425815 SLC14A2Q15849 920 aa18.25■□□□□ 0.51
SMARCAL1-205ENST00000425815 LYSMD3Q7Z3D4 306 aa18.25■□□□□ 0.51
SMARCAL1-205ENST00000425815 TRIM74Q86UV6 250 aa18.25■□□□□ 0.51
SMARCAL1-205ENST00000425815 CCDC50Q8IVM0 306 aa18.25■□□□□ 0.51
SMARCAL1-205ENST00000425815 SPC24Q8NBT2 197 aa18.25■□□□□ 0.51
SMARCAL1-205ENST00000425815 FAM46DQ8NEK8 389 aa18.25■□□□□ 0.51
SMARCAL1-205ENST00000425815 ALG3Q92685 438 aa18.25■□□□□ 0.51
SMARCAL1-205ENST00000425815 NAT6Q93015 286 aa18.25■□□□□ 0.51
SMARCAL1-205ENST00000425815 ADGRE3Q9BY15 652 aa18.25■□□□□ 0.51
SMARCAL1-205ENST00000425815 UBP1Q9NZI7 540 aa18.25■□□□□ 0.51
SMARCAL1-205ENST00000425815 IMPACTQ9P2X3 320 aa18.25■□□□□ 0.51
SMARCAL1-205ENST00000425815 TRIM10Q9UDY6 481 aa18.25■□□□□ 0.51
SMARCAL1-205ENST00000425815 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.25■□□□□ 0.51
SMARCAL1-205ENST00000425815 PLEKHM1Q9Y4G2 1056 aa18.25■□□□□ 0.51
SMARCAL1-205ENST00000425815 PCYT1BQ9Y5K3 369 aaPredicted RBP18.25■□□□□ 0.51
SMARCAL1-205ENST00000425815 GOLGA4Q13439 2230 aaKnown RBP18.25■□□□□ 0.51
SMARCAL1-205ENST00000425815 FADS2P1A8MWK0 482 aa18.24■□□□□ 0.51
SMARCAL1-205ENST00000425815 TLX3O43711 291 aaPredicted RBP18.24■□□□□ 0.51
SMARCAL1-205ENST00000425815 CSO75390 466 aaKnown RBP18.24■□□□□ 0.51
SMARCAL1-205ENST00000425815 FGF1P05230 155 aa18.24■□□□□ 0.51
SMARCAL1-205ENST00000425815 PIRTP0C851 137 aa18.24■□□□□ 0.51
SMARCAL1-205ENST00000425815 AK4P27144 223 aaPredicted RBP18.24■□□□□ 0.51
SMARCAL1-205ENST00000425815 GNPDA1P46926 289 aa18.24■□□□□ 0.51
SMARCAL1-205ENST00000425815 PCSK7Q16549 785 aa18.24■□□□□ 0.51
SMARCAL1-205ENST00000425815 ISXQ2M1V0 245 aa18.24■□□□□ 0.51
SMARCAL1-205ENST00000425815 HENMT1Q5T8I9 393 aaKnown RBP18.24■□□□□ 0.51
SMARCAL1-205ENST00000425815 AADACL2Q6P093 401 aa18.24■□□□□ 0.51
SMARCAL1-205ENST00000425815 KDELC1Q6UW63 502 aa18.24■□□□□ 0.51
SMARCAL1-205ENST00000425815 TMC3Q7Z5M5 1100 aa18.24■□□□□ 0.51
SMARCAL1-205ENST00000425815 C17orf82Q86X59 251 aaPredicted RBP18.24■□□□□ 0.51
SMARCAL1-205ENST00000425815 ZNF567Q8N184 647 aa18.24■□□□□ 0.51
SMARCAL1-205ENST00000425815 KIAA1524Q8TCG1 905 aa18.24■□□□□ 0.51
SMARCAL1-205ENST00000425815 CCDC74AQ96AQ1 378 aa18.24■□□□□ 0.51
SMARCAL1-205ENST00000425815 NXPE2Q96DL1 559 aa18.24■□□□□ 0.51
SMARCAL1-205ENST00000425815 HIC2Q96JB3 615 aa18.24■□□□□ 0.51
SMARCAL1-205ENST00000425815 DEPDC7Q96QD5 511 aa18.24■□□□□ 0.51
SMARCAL1-205ENST00000425815 FAM83DQ9H4H8 585 aa18.24■□□□□ 0.51
SMARCAL1-205ENST00000425815 SUDS3Q9H7L9 328 aaPredicted RBP18.24■□□□□ 0.51
SMARCAL1-205ENST00000425815 MAGEE1Q9HCI5 957 aa18.24■□□□□ 0.51
SMARCAL1-205ENST00000425815 TRNAU1APQ9NX07 287 aaKnown RBP18.24■□□□□ 0.51
SMARCAL1-205ENST00000425815 GPSM3Q9Y4H4 160 aa18.24■□□□□ 0.51
SMARCAL1-205ENST00000425815 OAS3Q9Y6K5 1087 aaKnown RBP18.24■□□□□ 0.51
SMARCAL1-205ENST00000425815 AK5Q9Y6K8 562 aa18.24■□□□□ 0.51
SMARCAL1-205ENST00000425815 KNTC1P50748 2209 aa18.24■□□□□ 0.51
SMARCAL1-205ENST00000425815 LOC285095A0A1B0GVY8 99 aa18.23■□□□□ 0.51
SMARCAL1-205ENST00000425815 RGSL1A5PLK6 1076 aa18.23■□□□□ 0.51
SMARCAL1-205ENST00000425815 INPP4BO15327 924 aa18.23■□□□□ 0.51
SMARCAL1-205ENST00000425815 PMPCBO75439 489 aa18.23■□□□□ 0.51
SMARCAL1-205ENST00000425815 IPO7O95373 1038 aaKnown RBP18.23■□□□□ 0.51
SMARCAL1-205ENST00000425815 PYGMP11217 842 aa18.23■□□□□ 0.51
SMARCAL1-205ENST00000425815 NFKB1P19838 968 aa18.23■□□□□ 0.51
SMARCAL1-205ENST00000425815 ADCY8P40145 1251 aa18.23■□□□□ 0.51
SMARCAL1-205ENST00000425815 PDX1P52945 283 aa18.23■□□□□ 0.51
SMARCAL1-205ENST00000425815 NAP1L1P55209 391 aaKnown RBP18.23■□□□□ 0.51
SMARCAL1-205ENST00000425815 COPS2P61201 443 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms