RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 SP100P23497 879 aaPredicted RBP26.42■■□□□ 1.82
LDB1-202ENST00000425280 EML3Q32P44 896 aa26.42■■□□□ 1.82
LDB1-202ENST00000425280 TCEAL5Q5H9L2 206 aa26.42■■□□□ 1.82
LDB1-202ENST00000425280 FAM78AQ5JUQ0 283 aa26.42■■□□□ 1.82
LDB1-202ENST00000425280 Q6ZVU0 165 aa26.42■■□□□ 1.82
LDB1-202ENST00000425280 KIAA1958Q8N8K9 716 aa26.42■■□□□ 1.82
LDB1-202ENST00000425280 TXNDC5Q8NBS9 432 aaKnown RBP26.42■■□□□ 1.82
LDB1-202ENST00000425280 WWP1Q9H0M0 922 aa26.42■■□□□ 1.82
LDB1-202ENST00000425280 ZDHHC6Q9H6R6 413 aa26.42■■□□□ 1.82
LDB1-202ENST00000425280 ACSS2Q9NR19 701 aa26.42■■□□□ 1.82
LDB1-202ENST00000425280 MED16Q9Y2X0 877 aa26.42■■□□□ 1.82
LDB1-202ENST00000425280 PRRC2BQ5JSZ5 2229 aaKnown RBP26.42■■□□□ 1.82
LDB1-202ENST00000425280 SRP72O76094 671 aaKnown RBP26.42■■□□□ 1.82
LDB1-202ENST00000425280 CLDN7O95471 211 aa26.42■■□□□ 1.82
LDB1-202ENST00000425280 RBP1P09455 135 aa26.42■■□□□ 1.82
LDB1-202ENST00000425280 NAGLUP54802 743 aa26.42■■□□□ 1.82
LDB1-202ENST00000425280 PFKPQ01813 784 aa26.42■■□□□ 1.82
LDB1-202ENST00000425280 ZBTB16Q05516 673 aa26.42■■□□□ 1.82
LDB1-202ENST00000425280 SPDYAQ5MJ70 313 aa26.42■■□□□ 1.82
LDB1-202ENST00000425280 MICALL1Q8N3F8 863 aa26.42■■□□□ 1.82
LDB1-202ENST00000425280 ASIC4Q96FT7 647 aa26.42■■□□□ 1.82
LDB1-202ENST00000425280 BIRC8Q96P09 236 aa26.42■■□□□ 1.82
LDB1-202ENST00000425280 TRANK1O15050 2925 aa26.41■■□□□ 1.82
LDB1-202ENST00000425280 SCN8AQ9UQD0 1980 aa26.41■■□□□ 1.82
LDB1-202ENST00000425280 ADH5P11766 374 aa26.41■■□□□ 1.82
LDB1-202ENST00000425280 ATP5F1P24539 256 aaPredicted RBP26.41■■□□□ 1.82
LDB1-202ENST00000425280 CACNG1Q06432 222 aa26.41■■□□□ 1.82
LDB1-202ENST00000425280 RARS2Q5T160 578 aaKnown RBP26.41■■□□□ 1.82
LDB1-202ENST00000425280 ALYREFQ86V81 257 aaKnown RBP26.41■■□□□ 1.82
LDB1-202ENST00000425280 CHST14Q8NCH0 376 aa26.41■■□□□ 1.82
LDB1-202ENST00000425280 FAM136AQ96C01 138 aa26.41■■□□□ 1.82
LDB1-202ENST00000425280 DRC3Q9H069 523 aa26.41■■□□□ 1.82
LDB1-202ENST00000425280 CCDC68Q9H2F9 335 aa26.41■■□□□ 1.82
LDB1-202ENST00000425280 PFDN6O15212 129 aa26.4■■□□□ 1.82
LDB1-202ENST00000425280 GPR39O43194 453 aa26.4■■□□□ 1.82
LDB1-202ENST00000425280 OR1I1O60431 355 aa26.4■■□□□ 1.82
LDB1-202ENST00000425280 RHOBTB1O94844 696 aa26.4■■□□□ 1.82
LDB1-202ENST00000425280 ZNF37AP17032 561 aaPredicted RBP26.4■■□□□ 1.82
LDB1-202ENST00000425280 TFEBP19484 476 aa26.4■■□□□ 1.82
LDB1-202ENST00000425280 PDAP1Q13442 181 aaKnown RBP26.4■■□□□ 1.82
LDB1-202ENST00000425280 PTPRNQ16849 979 aa26.4■■□□□ 1.82
LDB1-202ENST00000425280 SETMARQ53H47 684 aaPredicted RBP26.4■■□□□ 1.82
LDB1-202ENST00000425280 AARS2Q5JTZ9 985 aaKnown RBP26.4■■□□□ 1.82
LDB1-202ENST00000425280 TAS2R42Q7RTR8 314 aa26.4■■□□□ 1.82
LDB1-202ENST00000425280 MAVSQ7Z434 540 aa26.4■■□□□ 1.82
LDB1-202ENST00000425280 ZNF781Q8N8C0 355 aa26.4■■□□□ 1.82
LDB1-202ENST00000425280 CYB5D2Q8WUJ1 264 aa26.4■■□□□ 1.82
LDB1-202ENST00000425280 SORCS1Q8WY21 1168 aa26.4■■□□□ 1.82
LDB1-202ENST00000425280 MRGPRX3Q96LB0 322 aa26.4■■□□□ 1.82
LDB1-202ENST00000425280 ASB16Q96NS5 453 aa26.4■■□□□ 1.82
LDB1-202ENST00000425280 C19orf43Q9BQ61 176 aa26.4■■□□□ 1.82
LDB1-202ENST00000425280 MSRAQ9UJ68 235 aa26.4■■□□□ 1.82
LDB1-202ENST00000425280 SLC30A1Q9Y6M5 507 aa26.4■■□□□ 1.82
LDB1-202ENST00000425280 HSFX4A0A1B0GTS1 333 aaPredicted RBP26.4■■□□□ 1.82
LDB1-202ENST00000425280 HSFX3A0A1B0GWH4 333 aaPredicted RBP26.4■■□□□ 1.82
LDB1-202ENST00000425280 GAPDHSO14556 408 aaPredicted RBP26.4■■□□□ 1.82
LDB1-202ENST00000425280 CISD3P0C7P0 127 aa26.4■■□□□ 1.82
LDB1-202ENST00000425280 FSHRP23945 695 aa26.4■■□□□ 1.82
LDB1-202ENST00000425280 RAD51Q06609 339 aa26.4■■□□□ 1.82
LDB1-202ENST00000425280 RCN2Q14257 317 aa26.4■■□□□ 1.82
LDB1-202ENST00000425280 CTC1Q2NKJ3 1217 aa26.4■■□□□ 1.82
LDB1-202ENST00000425280 OR2A12Q8NGT7 310 aa26.4■■□□□ 1.82
LDB1-202ENST00000425280 PRR11Q96HE9 360 aaPredicted RBP26.4■■□□□ 1.82
LDB1-202ENST00000425280 LYSMD1Q96S90 227 aa26.4■■□□□ 1.82
LDB1-202ENST00000425280 EBF4Q9BQW3 602 aa26.4■■□□□ 1.82
LDB1-202ENST00000425280 PPIL1Q9Y3C6 166 aa26.4■■□□□ 1.82
LDB1-202ENST00000425280 NEMP2A6NFY4 417 aa26.39■■□□□ 1.82
LDB1-202ENST00000425280 NPIPB15A6NHN6 443 aaPredicted RBP26.39■■□□□ 1.82
LDB1-202ENST00000425280 UNC5CO95185 931 aa26.39■■□□□ 1.82
LDB1-202ENST00000425280 CHRNGP07510 517 aa26.39■■□□□ 1.82
LDB1-202ENST00000425280 CD1DP15813 335 aa26.39■■□□□ 1.82
LDB1-202ENST00000425280 SKIV2L2P42285 1042 aaKnown RBP26.39■■□□□ 1.82
LDB1-202ENST00000425280 DNAJB13P59910 316 aa26.39■■□□□ 1.82
LDB1-202ENST00000425280 ASPHQ12797 758 aa26.39■■□□□ 1.82
LDB1-202ENST00000425280 ISCA2Q86U28 154 aa26.39■■□□□ 1.82
LDB1-202ENST00000425280 TSPAN33Q86UF1 283 aa26.39■■□□□ 1.82
LDB1-202ENST00000425280 FGF13Q92913 245 aa26.39■■□□□ 1.82
LDB1-202ENST00000425280 ZNF641Q96N77 438 aaPredicted RBP26.39■■□□□ 1.82
LDB1-202ENST00000425280 APOL5Q9BWW9 433 aa26.39■■□□□ 1.82
LDB1-202ENST00000425280 IGFLR1Q9H665 355 aa26.39■■□□□ 1.82
LDB1-202ENST00000425280 TAS2R13Q9NYV9 303 aa26.39■■□□□ 1.82
LDB1-202ENST00000425280 CDH22Q9UJ99 828 aa26.39■■□□□ 1.82
LDB1-202ENST00000425280 FAM50BQ9Y247 325 aa26.39■■□□□ 1.82
LDB1-202ENST00000425280 RANBP2P49792 3224 aaKnown RBP26.39■■□□□ 1.81
LDB1-202ENST00000425280 A8MX80 341 aa26.38■■□□□ 1.81
LDB1-202ENST00000425280 ZNF195O14628 629 aa26.38■■□□□ 1.81
LDB1-202ENST00000425280 HOXC11O43248 304 aaPredicted RBP26.38■■□□□ 1.81
LDB1-202ENST00000425280 UGT2B4P06133 528 aa26.38■■□□□ 1.81
LDB1-202ENST00000425280 PKMP14618 531 aaKnown RBP26.38■■□□□ 1.81
LDB1-202ENST00000425280 ALOX15P16050 662 aaPredicted RBP26.38■■□□□ 1.81
LDB1-202ENST00000425280 CCR10P46092 362 aa26.38■■□□□ 1.81
LDB1-202ENST00000425280 CTSL3PQ5NE16 218 aa26.38■■□□□ 1.81
LDB1-202ENST00000425280 FAM151BQ6UXP7 276 aa26.38■■□□□ 1.81
LDB1-202ENST00000425280 C12orf40Q86WS4 652 aa26.38■■□□□ 1.81
LDB1-202ENST00000425280 PLPP6Q8IY26 295 aa26.38■■□□□ 1.81
LDB1-202ENST00000425280 BPIFB1Q8TDL5 484 aa26.38■■□□□ 1.81
LDB1-202ENST00000425280 FRS2Q8WU20 508 aa26.38■■□□□ 1.81
LDB1-202ENST00000425280 SMARCD2Q92925 531 aa26.38■■□□□ 1.81
LDB1-202ENST00000425280 SCRN2Q96FV2 425 aa26.38■■□□□ 1.81
LDB1-202ENST00000425280 POMKQ9H5K3 350 aa26.38■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms