RNA–Protein interactions for RNA: ENST00000425231.2

CDCP1-202, Transcript of CUB domain containing protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDCP1, Length 1,416 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-202ENST00000425231 CCDC170Q8IYT3 715 aa21.46■■□□□ 1.03
CDCP1-202ENST00000425231 NRSN1Q8IZ57 195 aa21.46■■□□□ 1.03
CDCP1-202ENST00000425231 LSMEM2Q8N112 164 aa21.46■■□□□ 1.03
CDCP1-202ENST00000425231 SCARF2Q96GP6 870 aaPredicted RBP21.46■■□□□ 1.03
CDCP1-202ENST00000425231 CEP41Q9BYV8 373 aa21.46■■□□□ 1.03
CDCP1-202ENST00000425231 GOLPH3Q9H4A6 298 aa21.46■■□□□ 1.03
CDCP1-202ENST00000425231 DPEP2Q9H4A9 486 aa21.46■■□□□ 1.03
CDCP1-202ENST00000425231 SPATS2LQ9NUQ6 558 aaKnown RBP21.46■■□□□ 1.03
CDCP1-202ENST00000425231 TRNAU1APQ9NX07 287 aaKnown RBP21.46■■□□□ 1.03
CDCP1-202ENST00000425231 SATB2Q9UPW6 733 aa21.46■■□□□ 1.03
CDCP1-202ENST00000425231 PCDHA13Q9Y5I0 950 aa21.46■■□□□ 1.03
CDCP1-202ENST00000425231 A0A1W2PQM1 296 aa21.45■■□□□ 1.02
CDCP1-202ENST00000425231 PPP1R12AO14974 1030 aaPredicted RBP21.45■■□□□ 1.02
CDCP1-202ENST00000425231 IVLP07476 585 aa21.45■■□□□ 1.02
CDCP1-202ENST00000425231 GLB1P16278 677 aa21.45■■□□□ 1.02
CDCP1-202ENST00000425231 CCL7P80098 99 aa21.45■■□□□ 1.02
CDCP1-202ENST00000425231 HLTFQ14527 1009 aaKnown RBP eCLIP21.45■■□□□ 1.02
CDCP1-202ENST00000425231 ODF2Q5BJF6 829 aa21.45■■□□□ 1.02
CDCP1-202ENST00000425231 CERCAMQ5T4B2 595 aa21.45■■□□□ 1.02
CDCP1-202ENST00000425231 B4GALNT4Q76KP1 1039 aa21.45■■□□□ 1.02
CDCP1-202ENST00000425231 IMP4Q96G21 291 aaKnown RBP21.45■■□□□ 1.02
CDCP1-202ENST00000425231 CRELD1Q96HD1 420 aa21.45■■□□□ 1.02
CDCP1-202ENST00000425231 ZNF578Q96N58 590 aaPredicted RBP21.45■■□□□ 1.02
CDCP1-202ENST00000425231 AGAP3Q96P47 875 aa21.45■■□□□ 1.02
CDCP1-202ENST00000425231 WDR24Q96S15 920 aa21.45■■□□□ 1.02
CDCP1-202ENST00000425231 MLPHQ9BV36 600 aaPredicted RBP21.45■■□□□ 1.02
CDCP1-202ENST00000425231 BRD8Q9H0E9 1235 aa21.45■■□□□ 1.02
CDCP1-202ENST00000425231 RBSNQ9H1K0 784 aa21.45■■□□□ 1.02
CDCP1-202ENST00000425231 SUDS3Q9H7L9 328 aaPredicted RBP21.45■■□□□ 1.02
CDCP1-202ENST00000425231 ASCL3Q9NQ33 180 aa21.45■■□□□ 1.02
CDCP1-202ENST00000425231 APPL1Q9UKG1 709 aa21.45■■□□□ 1.02
CDCP1-202ENST00000425231 KIF26BQ2KJY2 2108 aa21.44■■□□□ 1.02
CDCP1-202ENST00000425231 B4DGG1 531 aa21.44■■□□□ 1.02
CDCP1-202ENST00000425231 PSTPIP1O43586 416 aa21.44■■□□□ 1.02
CDCP1-202ENST00000425231 GNPDA1P46926 289 aa21.44■■□□□ 1.02
CDCP1-202ENST00000425231 C14orf28Q4W4Y0 310 aa21.44■■□□□ 1.02
CDCP1-202ENST00000425231 C3orf38Q5JPI3 329 aa21.44■■□□□ 1.02
CDCP1-202ENST00000425231 IGF2-ASQ6U949 168 aa21.44■■□□□ 1.02
CDCP1-202ENST00000425231 TADA1Q96BN2 335 aa21.44■■□□□ 1.02
CDCP1-202ENST00000425231 PRR11Q96HE9 360 aaPredicted RBP21.44■■□□□ 1.02
CDCP1-202ENST00000425231 HIC2Q96JB3 615 aa21.44■■□□□ 1.02
CDCP1-202ENST00000425231 TRIB3Q96RU7 358 aa21.44■■□□□ 1.02
CDCP1-202ENST00000425231 ANP32EQ9BTT0 268 aa21.44■■□□□ 1.02
CDCP1-202ENST00000425231 RIOK2Q9BVS4 552 aaKnown RBP21.44■■□□□ 1.02
CDCP1-202ENST00000425231 SAE1Q9UBE0 346 aaPredicted RBP21.44■■□□□ 1.02
CDCP1-202ENST00000425231 TMEM98Q9Y2Y6 226 aa21.44■■□□□ 1.02
CDCP1-202ENST00000425231 C1orf232A0A0U1RR37 186 aa21.43■■□□□ 1.02
CDCP1-202ENST00000425231 RRP8O43159 456 aaKnown RBP21.43■■□□□ 1.02
CDCP1-202ENST00000425231 FGF1P05230 155 aa21.43■■□□□ 1.02
CDCP1-202ENST00000425231 PNLIPP16233 465 aa21.43■■□□□ 1.02
CDCP1-202ENST00000425231 AK4P27144 223 aaPredicted RBP21.43■■□□□ 1.02
CDCP1-202ENST00000425231 ABCG1P45844 678 aa21.43■■□□□ 1.02
CDCP1-202ENST00000425231 NR2C2P49116 596 aa21.43■■□□□ 1.02
CDCP1-202ENST00000425231 ZNF75DP51815 510 aa21.43■■□□□ 1.02
CDCP1-202ENST00000425231 ERVPABLB-1P60509 514 aa21.43■■□□□ 1.02
CDCP1-202ENST00000425231 ADCY2Q08462 1091 aa21.43■■□□□ 1.02
CDCP1-202ENST00000425231 ILF3Q12906 894 aaKnown RBP eCLIP21.43■■□□□ 1.02
CDCP1-202ENST00000425231 SPOCD1Q6ZMY3 1216 aa21.43■■□□□ 1.02
CDCP1-202ENST00000425231 LRRC69Q6ZNQ3 347 aa21.43■■□□□ 1.02
CDCP1-202ENST00000425231 NT5DC3Q86UY8 548 aa21.43■■□□□ 1.02
CDCP1-202ENST00000425231 C17orf82Q86X59 251 aaPredicted RBP21.43■■□□□ 1.02
CDCP1-202ENST00000425231 EXD1Q8NHP7 514 aa21.43■■□□□ 1.02
CDCP1-202ENST00000425231 MRFAP1L1Q96HT8 127 aa21.43■■□□□ 1.02
CDCP1-202ENST00000425231 COX14Q96I36 57 aa21.43■■□□□ 1.02
CDCP1-202ENST00000425231 ADGRE3Q9BY15 652 aa21.43■■□□□ 1.02
CDCP1-202ENST00000425231 GSDMCQ9BYG8 508 aa21.43■■□□□ 1.02
CDCP1-202ENST00000425231 SLC25A51Q9H1U9 297 aa21.43■■□□□ 1.02
CDCP1-202ENST00000425231 LRRN3Q9H3W5 708 aa21.43■■□□□ 1.02
CDCP1-202ENST00000425231 SYNDIG1Q9H7V2 258 aa21.43■■□□□ 1.02
CDCP1-202ENST00000425231 TAAR2Q9P1P5 351 aa21.43■■□□□ 1.02
CDCP1-202ENST00000425231 LRIT1Q9P2V4 623 aa21.43■■□□□ 1.02
CDCP1-202ENST00000425231 RNF215Q9Y6U7 377 aa21.43■■□□□ 1.02
CDCP1-202ENST00000425231 A0A0A6YYK5 440 aaPredicted RBP21.42■■□□□ 1.02
CDCP1-202ENST00000425231 NUDT21O43809 227 aaKnown RBP21.42■■□□□ 1.02
CDCP1-202ENST00000425231 CST8O60676 142 aa21.42■■□□□ 1.02
CDCP1-202ENST00000425231 RPLP0P05388 317 aaKnown RBP21.42■■□□□ 1.02
CDCP1-202ENST00000425231 PYGLP06737 847 aa21.42■■□□□ 1.02
CDCP1-202ENST00000425231 ADCY8P40145 1251 aa21.42■■□□□ 1.02
CDCP1-202ENST00000425231 SPINT3P49223 89 aa21.42■■□□□ 1.02
CDCP1-202ENST00000425231 CTBSQ01459 385 aa21.42■■□□□ 1.02
CDCP1-202ENST00000425231 TFDP2Q14188 446 aa21.42■■□□□ 1.02
CDCP1-202ENST00000425231 PRKD1Q15139 912 aaPredicted RBP21.42■■□□□ 1.02
CDCP1-202ENST00000425231 LLGL1Q15334 1064 aa21.42■■□□□ 1.02
CDCP1-202ENST00000425231 SPA17Q15506 151 aa21.42■■□□□ 1.02
CDCP1-202ENST00000425231 TEX44Q53QW1 395 aa21.42■■□□□ 1.02
CDCP1-202ENST00000425231 DOK6Q6PKX4 331 aa21.42■■□□□ 1.02
CDCP1-202ENST00000425231 B3GNT8Q7Z7M8 397 aa21.42■■□□□ 1.02
CDCP1-202ENST00000425231 TRIM74Q86UV6 250 aa21.42■■□□□ 1.02
CDCP1-202ENST00000425231 KIAA1524Q8TCG1 905 aa21.42■■□□□ 1.02
CDCP1-202ENST00000425231 EID2BQ96D98 161 aa21.42■■□□□ 1.02
CDCP1-202ENST00000425231 SLC46A1Q96NT5 459 aa21.42■■□□□ 1.02
CDCP1-202ENST00000425231 PANX2Q96RD6 677 aa21.42■■□□□ 1.02
CDCP1-202ENST00000425231 GFM1Q96RP9 751 aaKnown RBP21.42■■□□□ 1.02
CDCP1-202ENST00000425231 SEPT10Q9P0V9 454 aa21.42■■□□□ 1.02
CDCP1-202ENST00000425231 PCDHGA8Q9Y5G5 932 aa21.42■■□□□ 1.02
CDCP1-202ENST00000425231 UNC13CQ8NB66 2214 aa21.42■■□□□ 1.02
CDCP1-202ENST00000425231 PMS2P1A4D2B8 440 aa21.41■■□□□ 1.02
CDCP1-202ENST00000425231 D6RAR5 112 aa21.41■■□□□ 1.02
CDCP1-202ENST00000425231 PECAM1P16284 738 aaPredicted RBP21.41■■□□□ 1.02
CDCP1-202ENST00000425231 FECHP22830 423 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms