RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 ABCB7O75027 752 aa11.28□□□□□ -0.6
SEC61A1-202ENST00000424880 UGT2B11O75310 529 aa11.28□□□□□ -0.6
SEC61A1-202ENST00000424880 CD4P01730 458 aa11.28□□□□□ -0.6
SEC61A1-202ENST00000424880 TUBA1BP68363 451 aa11.28□□□□□ -0.6
SEC61A1-202ENST00000424880 MADCAM1Q13477 382 aa11.28□□□□□ -0.6
SEC61A1-202ENST00000424880 BAATQ14032 418 aaPredicted RBP11.28□□□□□ -0.6
SEC61A1-202ENST00000424880 GRB7Q14451 532 aa11.28□□□□□ -0.6
SEC61A1-202ENST00000424880 POU6F1Q14863 301 aa11.28□□□□□ -0.6
SEC61A1-202ENST00000424880 LINC00299Q6ZSB3 139 aa11.28□□□□□ -0.6
SEC61A1-202ENST00000424880 TUBA1AQ71U36 451 aa11.28□□□□□ -0.6
SEC61A1-202ENST00000424880 CUZD1Q86UP6 607 aa11.28□□□□□ -0.6
SEC61A1-202ENST00000424880 RYBPQ8N488 228 aaPredicted RBP11.28□□□□□ -0.6
SEC61A1-202ENST00000424880 SUN5Q8TC36 379 aa11.28□□□□□ -0.6
SEC61A1-202ENST00000424880 HCAR2Q8TDS4 363 aa11.28□□□□□ -0.6
SEC61A1-202ENST00000424880 TMEM176AQ96HP8 235 aa11.28□□□□□ -0.6
SEC61A1-202ENST00000424880 FEM1AQ9BSK4 669 aa11.28□□□□□ -0.6
SEC61A1-202ENST00000424880 SYT17Q9BSW7 474 aa11.28□□□□□ -0.6
SEC61A1-202ENST00000424880 GIMAP4Q9NUV9 329 aa11.28□□□□□ -0.6
SEC61A1-202ENST00000424880 BTRCQ9Y297 605 aa11.28□□□□□ -0.6
SEC61A1-202ENST00000424880 TMX2Q9Y320 296 aa11.28□□□□□ -0.6
SEC61A1-202ENST00000424880 VWA7Q9Y334 891 aa11.28□□□□□ -0.6
SEC61A1-202ENST00000424880 DOCK5Q9H7D0 1870 aa11.28□□□□□ -0.6
SEC61A1-202ENST00000424880 M0QX08 132 aa11.28□□□□□ -0.6
SEC61A1-202ENST00000424880 NUAK1O60285 661 aa11.28□□□□□ -0.6
SEC61A1-202ENST00000424880 CABYRO75952 493 aa11.28□□□□□ -0.6
SEC61A1-202ENST00000424880 SUPT7LO94864 414 aa11.28□□□□□ -0.6
SEC61A1-202ENST00000424880 DNTTP04053 509 aa11.28□□□□□ -0.6
SEC61A1-202ENST00000424880 CYP4B1P13584 511 aa11.28□□□□□ -0.6
SEC61A1-202ENST00000424880 PSMB9P28065 219 aa11.28□□□□□ -0.6
SEC61A1-202ENST00000424880 NDST1P52848 882 aa11.28□□□□□ -0.6
SEC61A1-202ENST00000424880 RABGGTBP53611 331 aa11.28□□□□□ -0.6
SEC61A1-202ENST00000424880 AGBL3Q8NEM8 1001 aa11.28□□□□□ -0.6
SEC61A1-202ENST00000424880 TRPV3Q8NET8 790 aa11.28□□□□□ -0.6
SEC61A1-202ENST00000424880 MYRFLQ96LU7 910 aa11.28□□□□□ -0.6
SEC61A1-202ENST00000424880 GPR78Q96P69 363 aa11.28□□□□□ -0.6
SEC61A1-202ENST00000424880 WDR12Q9GZL7 423 aaKnown RBP11.28□□□□□ -0.6
SEC61A1-202ENST00000424880 IRF2BPLQ9H1B7 796 aa11.28□□□□□ -0.6
SEC61A1-202ENST00000424880 RETREG1Q9H6L5 497 aa11.28□□□□□ -0.6
SEC61A1-202ENST00000424880 VTI1BQ9UEU0 232 aa11.28□□□□□ -0.6
SEC61A1-202ENST00000424880 CSADQ9Y600 493 aa11.28□□□□□ -0.6
SEC61A1-202ENST00000424880 TANC1Q9C0D5 1861 aa11.28□□□□□ -0.6
SEC61A1-202ENST00000424880 SCN4AP35499 1836 aa11.27□□□□□ -0.6
SEC61A1-202ENST00000424880 ANGPT2O15123 496 aa11.27□□□□□ -0.61
SEC61A1-202ENST00000424880 HSPA1AP0DMV8 641 aaKnown RBP11.27□□□□□ -0.61
SEC61A1-202ENST00000424880 HSPA1BP0DMV9 641 aaKnown RBP11.27□□□□□ -0.61
SEC61A1-202ENST00000424880 IFI30P13284 250 aa11.27□□□□□ -0.61
SEC61A1-202ENST00000424880 GFAPP14136 432 aa11.27□□□□□ -0.61
SEC61A1-202ENST00000424880 KCNA2P16389 499 aa11.27□□□□□ -0.61
SEC61A1-202ENST00000424880 SLC6A2P23975 617 aa11.27□□□□□ -0.61
SEC61A1-202ENST00000424880 CD40LGP29965 261 aa11.27□□□□□ -0.61
SEC61A1-202ENST00000424880 CYP2C18P33260 490 aa11.27□□□□□ -0.61
SEC61A1-202ENST00000424880 RFC2P35250 354 aa11.27□□□□□ -0.61
SEC61A1-202ENST00000424880 KRT6CP48668 564 aa11.27□□□□□ -0.61
SEC61A1-202ENST00000424880 ALDH7A1P49419 539 aaKnown RBP11.27□□□□□ -0.61
SEC61A1-202ENST00000424880 FOXA1P55317 472 aa11.27□□□□□ -0.61
SEC61A1-202ENST00000424880 CAPSQ13938 189 aa11.27□□□□□ -0.61
SEC61A1-202ENST00000424880 CYHR1Q6ZMK1 362 aa11.27□□□□□ -0.61
SEC61A1-202ENST00000424880 ACOT1Q86TX2 421 aa11.27□□□□□ -0.61
SEC61A1-202ENST00000424880 DCP2Q8IU60 420 aaKnown RBP11.27□□□□□ -0.61
SEC61A1-202ENST00000424880 TOP1MTQ969P6 601 aa11.27□□□□□ -0.61
SEC61A1-202ENST00000424880 TXNDC15Q96J42 360 aa11.27□□□□□ -0.61
SEC61A1-202ENST00000424880 TEX37Q96LM6 180 aa11.27□□□□□ -0.61
SEC61A1-202ENST00000424880 YME1L1Q96TA2 773 aa11.27□□□□□ -0.61
SEC61A1-202ENST00000424880 GAD1Q99259 594 aa11.27□□□□□ -0.61
SEC61A1-202ENST00000424880 SLC25A23Q9BV35 468 aa11.27□□□□□ -0.61
SEC61A1-202ENST00000424880 REXO4Q9GZR2 422 aaKnown RBP11.27□□□□□ -0.61
SEC61A1-202ENST00000424880 PDLIM7Q9NR12 457 aa11.27□□□□□ -0.61
SEC61A1-202ENST00000424880 ACOT9Q9Y305 439 aa11.27□□□□□ -0.61
SEC61A1-202ENST00000424880 LOXHD1Q8IVV2 1947 aa11.27□□□□□ -0.61
SEC61A1-202ENST00000424880 CITO14578 2027 aa11.27□□□□□ -0.61
SEC61A1-202ENST00000424880 SYCE1LA8MT33 242 aa11.27□□□□□ -0.61
SEC61A1-202ENST00000424880 PEX10O60683 326 aa11.27□□□□□ -0.61
SEC61A1-202ENST00000424880 DEAF1O75398 565 aaPredicted RBP11.27□□□□□ -0.61
SEC61A1-202ENST00000424880 LDLRP01130 860 aa11.27□□□□□ -0.61
SEC61A1-202ENST00000424880 MPOP05164 745 aa11.27□□□□□ -0.61
SEC61A1-202ENST00000424880 KRT8P05787 483 aa11.27□□□□□ -0.61
SEC61A1-202ENST00000424880 ABCB1P08183 1280 aaPredicted RBP11.27□□□□□ -0.61
SEC61A1-202ENST00000424880 HOXC6P09630 235 aa11.27□□□□□ -0.61
SEC61A1-202ENST00000424880 ALOX12P18054 663 aa11.27□□□□□ -0.61
SEC61A1-202ENST00000424880 FMO3P31513 532 aa11.27□□□□□ -0.61
SEC61A1-202ENST00000424880 NAMPTP43490 491 aa11.27□□□□□ -0.61
SEC61A1-202ENST00000424880 ADARB1P78563 741 aaKnown RBP11.27□□□□□ -0.61
SEC61A1-202ENST00000424880 SP2Q02086 613 aa11.27□□□□□ -0.61
SEC61A1-202ENST00000424880 DALRD3Q5D0E6 543 aaKnown RBP11.27□□□□□ -0.61
SEC61A1-202ENST00000424880 NOL9Q5SY16 702 aaKnown RBP11.27□□□□□ -0.61
SEC61A1-202ENST00000424880 PPP1R26Q5T8A7 1209 aaPredicted RBP11.27□□□□□ -0.61
SEC61A1-202ENST00000424880 SLFN12LQ6IEE8 588 aa11.27□□□□□ -0.61
SEC61A1-202ENST00000424880 NAPEPLDQ6IQ20 393 aa11.27□□□□□ -0.61
SEC61A1-202ENST00000424880 LDB1Q86U70 411 aaPredicted RBP11.27□□□□□ -0.61
SEC61A1-202ENST00000424880 WDR49Q8IV35 697 aa11.27□□□□□ -0.61
SEC61A1-202ENST00000424880 BRSK2Q8IWQ3 736 aa11.27□□□□□ -0.61
SEC61A1-202ENST00000424880 FAM86B1Q8N7N1 296 aa11.27□□□□□ -0.61
SEC61A1-202ENST00000424880 DCBLD1Q8N8Z6 715 aa11.27□□□□□ -0.61
SEC61A1-202ENST00000424880 MTMR14Q8NCE2 650 aa11.27□□□□□ -0.61
SEC61A1-202ENST00000424880 STYXQ8WUJ0 223 aa11.27□□□□□ -0.61
SEC61A1-202ENST00000424880 TP53INP1Q96A56 240 aa11.27□□□□□ -0.61
SEC61A1-202ENST00000424880 ELMO2Q96JJ3 720 aa11.27□□□□□ -0.61
SEC61A1-202ENST00000424880 QKIQ96PU8 341 aaKnown RBP eCLIP11.27□□□□□ -0.61
SEC61A1-202ENST00000424880 LHX5Q9H2C1 402 aa11.27□□□□□ -0.61
SEC61A1-202ENST00000424880 BFARQ9NZS9 450 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms