RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 PITX1P78337 314 aaPredicted RBP6.28□□□□□ -1.4
SDCBP-203ENST00000424270 ARF5P84085 180 aa6.28□□□□□ -1.4
SDCBP-203ENST00000424270 PPP2R2BQ00005 443 aa6.28□□□□□ -1.4
SDCBP-203ENST00000424270 RBPJQ06330 500 aa6.28□□□□□ -1.4
SDCBP-203ENST00000424270 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.28□□□□□ -1.4
SDCBP-203ENST00000424270 DENND2CQ68D51 928 aa6.28□□□□□ -1.4
SDCBP-203ENST00000424270 KRT39Q6A163 491 aa6.28□□□□□ -1.4
SDCBP-203ENST00000424270 LCLAT1Q6UWP7 414 aa6.28□□□□□ -1.4
SDCBP-203ENST00000424270 INTS8Q75QN2 995 aaKnown RBP6.28□□□□□ -1.4
SDCBP-203ENST00000424270 MARK2Q7KZI7 788 aaKnown RBP6.28□□□□□ -1.4
SDCBP-203ENST00000424270 SLC9B2Q86UD5 537 aa6.28□□□□□ -1.4
SDCBP-203ENST00000424270 TMEM126BQ8IUX1 230 aa6.28□□□□□ -1.4
SDCBP-203ENST00000424270 GALNT16Q8N428 558 aa6.28□□□□□ -1.4
SDCBP-203ENST00000424270 BCORP1Q8N888 145 aa6.28□□□□□ -1.4
SDCBP-203ENST00000424270 ENDOVQ8N8Q3 282 aaKnown RBP6.28□□□□□ -1.4
SDCBP-203ENST00000424270 FBXL13Q8NEE6 735 aa6.28□□□□□ -1.4
SDCBP-203ENST00000424270 DNAJB8Q8NHS0 232 aa6.28□□□□□ -1.4
SDCBP-203ENST00000424270 SLC35F5Q8WV83 523 aa6.28□□□□□ -1.4
SDCBP-203ENST00000424270 INPP5DQ92835 1189 aa6.28□□□□□ -1.4
SDCBP-203ENST00000424270 ISG20Q96AZ6 181 aaKnown RBP6.28□□□□□ -1.4
SDCBP-203ENST00000424270 EEF2KMTQ96G04 330 aa6.28□□□□□ -1.4
SDCBP-203ENST00000424270 C9orf72Q96LT7 481 aa6.28□□□□□ -1.4
SDCBP-203ENST00000424270 ZSCAN31Q96LW9 406 aaPredicted RBP6.28□□□□□ -1.4
SDCBP-203ENST00000424270 FER1L6-AS2Q96M78 137 aa6.28□□□□□ -1.4
SDCBP-203ENST00000424270 GBP5Q96PP8 586 aa6.28□□□□□ -1.4
SDCBP-203ENST00000424270 MED15Q96RN5 788 aa6.28□□□□□ -1.4
SDCBP-203ENST00000424270 SMR3AQ99954 134 aa6.28□□□□□ -1.4
SDCBP-203ENST00000424270 FOXC2Q99958 501 aa6.28□□□□□ -1.4
SDCBP-203ENST00000424270 WDR77Q9BQA1 342 aaPredicted RBP6.28□□□□□ -1.4
SDCBP-203ENST00000424270 SLC7A5P2Q9GIP4 190 aa6.28□□□□□ -1.4
SDCBP-203ENST00000424270 TMEM8AQ9HCN3 771 aa6.28□□□□□ -1.4
SDCBP-203ENST00000424270 PCDH12Q9NPG4 1184 aa6.28□□□□□ -1.4
SDCBP-203ENST00000424270 CCM2LQ9NUG4 571 aaPredicted RBP6.28□□□□□ -1.4
SDCBP-203ENST00000424270 KIAA1257Q9ULG3 409 aa6.28□□□□□ -1.4
SDCBP-203ENST00000424270 NOVA2Q9UNW9 492 aaKnown RBP6.28□□□□□ -1.4
SDCBP-203ENST00000424270 PCDHB4Q9Y5E5 795 aa6.28□□□□□ -1.4
SDCBP-203ENST00000424270 DIDO1Q9BTC0 2240 aaKnown RBP6.27□□□□□ -1.4
SDCBP-203ENST00000424270 ILVBLA1L0T0 632 aa6.27□□□□□ -1.41
SDCBP-203ENST00000424270 MASP2O00187 686 aa6.27□□□□□ -1.41
SDCBP-203ENST00000424270 BUB1O43683 1085 aa6.27□□□□□ -1.41
SDCBP-203ENST00000424270 CALUO43852 315 aaPredicted RBP6.27□□□□□ -1.41
SDCBP-203ENST00000424270 STX10O60499 249 aa6.27□□□□□ -1.41
SDCBP-203ENST00000424270 CPNE3O75131 537 aaKnown RBP6.27□□□□□ -1.41
SDCBP-203ENST00000424270 GRAP2O75791 330 aa6.27□□□□□ -1.41
SDCBP-203ENST00000424270 UNC5CO95185 931 aa6.27□□□□□ -1.41
SDCBP-203ENST00000424270 ZWINTO95229 277 aa6.27□□□□□ -1.41
SDCBP-203ENST00000424270 PIGNO95427 931 aa6.27□□□□□ -1.41
SDCBP-203ENST00000424270 CLDN14O95500 239 aa6.27□□□□□ -1.41
SDCBP-203ENST00000424270 ANKRD34CP0C6C1 535 aa6.27□□□□□ -1.41
SDCBP-203ENST00000424270 FGF5P12034 268 aa6.27□□□□□ -1.41
SDCBP-203ENST00000424270 SLC2A4P14672 509 aa6.27□□□□□ -1.41
SDCBP-203ENST00000424270 BRD2P25440 801 aaKnown RBP6.27□□□□□ -1.41
SDCBP-203ENST00000424270 ETFBP38117 255 aa6.27□□□□□ -1.41
SDCBP-203ENST00000424270 KIR3DL1P43629 444 aa6.27□□□□□ -1.41
SDCBP-203ENST00000424270 FASLGP48023 281 aa6.27□□□□□ -1.41
SDCBP-203ENST00000424270 ARCN1P48444 511 aaKnown RBP6.27□□□□□ -1.41
SDCBP-203ENST00000424270 POLD2P49005 469 aa6.27□□□□□ -1.41
SDCBP-203ENST00000424270 MXI1P50539 228 aa6.27□□□□□ -1.41
SDCBP-203ENST00000424270 DGKQP52824 942 aa6.27□□□□□ -1.41
SDCBP-203ENST00000424270 EPHA4P54764 986 aa6.27□□□□□ -1.41
SDCBP-203ENST00000424270 CSNK1G2P78368 415 aa6.27□□□□□ -1.41
SDCBP-203ENST00000424270 GNA12Q03113 381 aa6.27□□□□□ -1.41
SDCBP-203ENST00000424270 FOLH1Q04609 750 aa6.27□□□□□ -1.41
SDCBP-203ENST00000424270 PPP3CAQ08209 521 aa6.27□□□□□ -1.41
SDCBP-203ENST00000424270 LRMPQ12912 555 aa6.27□□□□□ -1.41
SDCBP-203ENST00000424270 CUL2Q13617 745 aa6.27□□□□□ -1.41
SDCBP-203ENST00000424270 MYBPC3Q14896 1274 aa6.27□□□□□ -1.41
SDCBP-203ENST00000424270 ZNF169Q14929 603 aaPredicted RBP6.27□□□□□ -1.41
SDCBP-203ENST00000424270 STILQ15468 1287 aa6.27□□□□□ -1.41
SDCBP-203ENST00000424270 HIF1AQ16665 826 aa6.27□□□□□ -1.41
SDCBP-203ENST00000424270 CACHD1Q5VU97 1274 aa6.27□□□□□ -1.41
SDCBP-203ENST00000424270 FAM69BQ5VUD6 431 aa6.27□□□□□ -1.41
SDCBP-203ENST00000424270 FCRL6Q6DN72 434 aa6.27□□□□□ -1.41
SDCBP-203ENST00000424270 PWWP2BQ6NUJ5 590 aa6.27□□□□□ -1.41
SDCBP-203ENST00000424270 IRGCQ6NXR0 463 aa6.27□□□□□ -1.41
SDCBP-203ENST00000424270 DUS1LQ6P1R4 473 aaKnown RBP6.27□□□□□ -1.41
SDCBP-203ENST00000424270 PNCKQ6P2M8 343 aa6.27□□□□□ -1.41
SDCBP-203ENST00000424270 TMEM270Q6UE05 265 aa6.27□□□□□ -1.41
SDCBP-203ENST00000424270 ZNF783Q6ZMS7 281 aa6.27□□□□□ -1.41
SDCBP-203ENST00000424270 Q6ZS92 163 aa6.27□□□□□ -1.41
SDCBP-203ENST00000424270 FAM92BQ6ZTR7 304 aa6.27□□□□□ -1.41
SDCBP-203ENST00000424270 TRIM48Q8IWZ4 208 aa6.27□□□□□ -1.41
SDCBP-203ENST00000424270 SIDT2Q8NBJ9 832 aaKnown RBP6.27□□□□□ -1.41
SDCBP-203ENST00000424270 NRGNQ92686 78 aa6.27□□□□□ -1.41
SDCBP-203ENST00000424270 DHX58Q96C10 678 aa6.27□□□□□ -1.41
SDCBP-203ENST00000424270 OR2M4Q96R27 311 aa6.27□□□□□ -1.41
SDCBP-203ENST00000424270 BARD1Q99728 777 aaKnown RBP6.27□□□□□ -1.41
SDCBP-203ENST00000424270 SPOCK3Q9BQ16 436 aa6.27□□□□□ -1.41
SDCBP-203ENST00000424270 ZNF559Q9BR84 538 aa6.27□□□□□ -1.41
SDCBP-203ENST00000424270 TBC1D10AQ9BXI6 508 aa6.27□□□□□ -1.41
SDCBP-203ENST00000424270 TKTL2Q9H0I9 626 aa6.27□□□□□ -1.41
SDCBP-203ENST00000424270 BLZF1Q9H2G9 400 aa6.27□□□□□ -1.41
SDCBP-203ENST00000424270 EPB41L1Q9H4G0 881 aa6.27□□□□□ -1.41
SDCBP-203ENST00000424270 WDCPQ9H6R7 721 aa6.27□□□□□ -1.41
SDCBP-203ENST00000424270 AKIRIN1Q9H9L7 192 aaPredicted RBP6.27□□□□□ -1.41
SDCBP-203ENST00000424270 WASH6PQ9NQA3 447 aa6.27□□□□□ -1.41
SDCBP-203ENST00000424270 RAB20Q9NX57 234 aa6.27□□□□□ -1.41
SDCBP-203ENST00000424270 KIAA1468Q9P260 1216 aa6.27□□□□□ -1.41
SDCBP-203ENST00000424270 EDARQ9UNE0 448 aa6.27□□□□□ -1.41
SDCBP-203ENST00000424270 SNX10Q9Y5X0 201 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms