RNA–Protein interactions for RNA: ENST00000422491.6

USP54-204, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 1 (best) BASIC

Gene USP54, Length 2,777 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-204ENST00000422491 CHDHQ8NE62 594 aaPredicted RBP10.69□□□□□ -0.7
USP54-204ENST00000422491 DPF3Q92784 378 aa10.69□□□□□ -0.7
USP54-204ENST00000422491 TEKT5Q96M29 485 aa10.69□□□□□ -0.7
USP54-204ENST00000422491 IL12RB2Q99665 862 aa10.69□□□□□ -0.7
USP54-204ENST00000422491 KCTD14Q9BQ13 255 aaPredicted RBP10.69□□□□□ -0.7
USP54-204ENST00000422491 TEX13BQ9BXU2 312 aa10.69□□□□□ -0.7
USP54-204ENST00000422491 NDEL1Q9GZM8 345 aa10.69□□□□□ -0.7
USP54-204ENST00000422491 SDR39U1Q9NRG7 319 aaPredicted RBP10.69□□□□□ -0.7
USP54-204ENST00000422491 COX16Q9P0S2 106 aa10.69□□□□□ -0.7
USP54-204ENST00000422491 ATP11BQ9Y2G3 1177 aa10.69□□□□□ -0.7
USP54-204ENST00000422491 NAALAD2Q9Y3Q0 740 aa10.69□□□□□ -0.7
USP54-204ENST00000422491 DNAJC15Q9Y5T4 150 aa10.69□□□□□ -0.7
USP54-204ENST00000422491 PTGDR2Q9Y5Y4 395 aa10.69□□□□□ -0.7
USP54-204ENST00000422491 PMF1-BGLAPU3KQ54 211 aa10.69□□□□□ -0.7
USP54-204ENST00000422491 PPEF2O14830 753 aa10.68□□□□□ -0.7
USP54-204ENST00000422491 MTSS1O43312 755 aa10.68□□□□□ -0.7
USP54-204ENST00000422491 DNAJB5O75953 348 aa10.68□□□□□ -0.7
USP54-204ENST00000422491 INMTO95050 263 aa10.68□□□□□ -0.7
USP54-204ENST00000422491 MMP10P09238 476 aa10.68□□□□□ -0.7
USP54-204ENST00000422491 HRH2P25021 359 aa10.68□□□□□ -0.7
USP54-204ENST00000422491 CLCN3P51790 818 aa10.68□□□□□ -0.7
USP54-204ENST00000422491 CLCQ05315 142 aa10.68□□□□□ -0.7
USP54-204ENST00000422491 SEMA3BQ13214 749 aa10.68□□□□□ -0.7
USP54-204ENST00000422491 LAMC2Q13753 1193 aa10.68□□□□□ -0.7
USP54-204ENST00000422491 GRB7Q14451 532 aa10.68□□□□□ -0.7
USP54-204ENST00000422491 POU6F1Q14863 301 aa10.68□□□□□ -0.7
USP54-204ENST00000422491 FXNQ16595 210 aa10.68□□□□□ -0.7
USP54-204ENST00000422491 C6orf141Q5SZD1 244 aa10.68□□□□□ -0.7
USP54-204ENST00000422491 AGAP9Q5VTM2 703 aa10.68□□□□□ -0.7
USP54-204ENST00000422491 UGT3A1Q6NUS8 523 aa10.68□□□□□ -0.7
USP54-204ENST00000422491 TAF2Q6P1X5 1199 aa10.68□□□□□ -0.7
USP54-204ENST00000422491 BLOC1S3Q6QNY0 202 aa10.68□□□□□ -0.7
USP54-204ENST00000422491 SLC22A16Q86VW1 577 aa10.68□□□□□ -0.7
USP54-204ENST00000422491 MMAAQ8IVH4 418 aaKnown RBP10.68□□□□□ -0.7
USP54-204ENST00000422491 SLC22A9Q8IVM8 553 aa10.68□□□□□ -0.7
USP54-204ENST00000422491 C8orf59Q8N0T1 100 aaPredicted RBP10.68□□□□□ -0.7
USP54-204ENST00000422491 NAT16Q8N8M0 369 aa10.68□□□□□ -0.7
USP54-204ENST00000422491 PDZD8Q8NEN9 1154 aa10.68□□□□□ -0.7
USP54-204ENST00000422491 DNAJB14Q8TBM8 379 aa10.68□□□□□ -0.7
USP54-204ENST00000422491 BIRC7Q96CA5 298 aa10.68□□□□□ -0.7
USP54-204ENST00000422491 DHRS1Q96LJ7 313 aa10.68□□□□□ -0.7
USP54-204ENST00000422491 NPY6RQ99463 290 aa10.68□□□□□ -0.7
USP54-204ENST00000422491 SEPHS2Q99611 448 aa10.68□□□□□ -0.7
USP54-204ENST00000422491 HOXD1Q9GZZ0 328 aa10.68□□□□□ -0.7
USP54-204ENST00000422491 POLE4Q9NR33 117 aa10.68□□□□□ -0.7
USP54-204ENST00000422491 PRMT7Q9NVM4 692 aaPredicted RBP10.68□□□□□ -0.7
USP54-204ENST00000422491 SLC2A6Q9UGQ3 507 aa10.68□□□□□ -0.7
USP54-204ENST00000422491 PDE10AQ9Y233 779 aa10.68□□□□□ -0.7
USP54-204ENST00000422491 SHROOM3Q8TF72 1996 aa10.68□□□□□ -0.7
USP54-204ENST00000422491 ASPDHA6ND91 283 aa10.68□□□□□ -0.7
USP54-204ENST00000422491 I6L893 689 aaPredicted RBP10.68□□□□□ -0.7
USP54-204ENST00000422491 DAB1O75553 588 aa10.68□□□□□ -0.7
USP54-204ENST00000422491 ZBTB7AO95365 584 aa10.68□□□□□ -0.7
USP54-204ENST00000422491 LTA4HP09960 611 aaKnown RBP10.68□□□□□ -0.7
USP54-204ENST00000422491 ACADSBP45954 432 aa10.68□□□□□ -0.7
USP54-204ENST00000422491 SLC12A2P55011 1212 aa10.68□□□□□ -0.7
USP54-204ENST00000422491 ECT2LQ008S8 904 aa10.68□□□□□ -0.7
USP54-204ENST00000422491 CDC20Q12834 499 aa10.68□□□□□ -0.7
USP54-204ENST00000422491 IMPG1Q17R60 797 aa10.68□□□□□ -0.7
USP54-204ENST00000422491 CTU2Q2VPK5 515 aaKnown RBP10.68□□□□□ -0.7
USP54-204ENST00000422491 ZNF678Q5SXM1 525 aa10.68□□□□□ -0.7
USP54-204ENST00000422491 ATAD3BQ5T9A4 648 aa10.68□□□□□ -0.7
USP54-204ENST00000422491 ZNF470Q6ECI4 717 aa10.68□□□□□ -0.7
USP54-204ENST00000422491 LAIR2Q6ISS4 152 aa10.68□□□□□ -0.7
USP54-204ENST00000422491 PDZD4Q76G19 769 aaPredicted RBP10.68□□□□□ -0.7
USP54-204ENST00000422491 VASH1Q7L8A9 365 aaPredicted RBP10.68□□□□□ -0.7
USP54-204ENST00000422491 EXOC8Q8IYI6 725 aa10.68□□□□□ -0.7
USP54-204ENST00000422491 ZCCHC7Q8N3Z6 543 aaKnown RBP10.68□□□□□ -0.7
USP54-204ENST00000422491 MTMR14Q8NCE2 650 aa10.68□□□□□ -0.7
USP54-204ENST00000422491 OR6Q1Q8NGQ2 317 aa10.68□□□□□ -0.7
USP54-204ENST00000422491 FAM149B1Q96BN6 582 aa10.68□□□□□ -0.7
USP54-204ENST00000422491 L3HYPDHQ96EM0 354 aa10.68□□□□□ -0.7
USP54-204ENST00000422491 TXNDC15Q96J42 360 aa10.68□□□□□ -0.7
USP54-204ENST00000422491 C12orf42Q96LP6 360 aa10.68□□□□□ -0.7
USP54-204ENST00000422491 CYP2S1Q96SQ9 504 aa10.68□□□□□ -0.7
USP54-204ENST00000422491 VAT1Q99536 393 aa10.68□□□□□ -0.7
USP54-204ENST00000422491 BTBD2Q9BX70 525 aa10.68□□□□□ -0.7
USP54-204ENST00000422491 LTB4R2Q9NPC1 389 aa10.68□□□□□ -0.7
USP54-204ENST00000422491 PIGVQ9NUD9 493 aa10.68□□□□□ -0.7
USP54-204ENST00000422491 GDAP2Q9NXN4 497 aa10.68□□□□□ -0.7
USP54-204ENST00000422491 USP22Q9UPT9 525 aa10.68□□□□□ -0.7
USP54-204ENST00000422491 MAGED1Q9Y5V3 778 aaPredicted RBP10.68□□□□□ -0.7
USP54-204ENST00000422491 V9GYQ6 96 aa10.68□□□□□ -0.7
USP54-204ENST00000422491 MYLKQ15746 1914 aa10.68□□□□□ -0.7
USP54-204ENST00000422491 LOC285556D6RIA3 1793 aa10.67□□□□□ -0.7
USP54-204ENST00000422491 M0QYT0 321 aa10.67□□□□□ -0.7
USP54-204ENST00000422491 UBXN8O00124 270 aa10.67□□□□□ -0.7
USP54-204ENST00000422491 RGS13O14921 159 aa10.67□□□□□ -0.7
USP54-204ENST00000422491 NUAK1O60285 661 aa10.67□□□□□ -0.7
USP54-204ENST00000422491 HUS1O60921 280 aa10.67□□□□□ -0.7
USP54-204ENST00000422491 SUPT7LO94864 414 aa10.67□□□□□ -0.7
USP54-204ENST00000422491 RBP1P09455 135 aa10.67□□□□□ -0.7
USP54-204ENST00000422491 SOX11P35716 441 aa10.67□□□□□ -0.7
USP54-204ENST00000422491 BMPR1AP36894 532 aa10.67□□□□□ -0.7
USP54-204ENST00000422491 NEK2P51955 445 aa10.67□□□□□ -0.7
USP54-204ENST00000422491 BACE1P56817 501 aa10.67□□□□□ -0.7
USP54-204ENST00000422491 SH3BP2P78314 561 aa10.67□□□□□ -0.7
USP54-204ENST00000422491 ACAP2Q15057 778 aa10.67□□□□□ -0.7
USP54-204ENST00000422491 FAM187BQ17R55 369 aa10.67□□□□□ -0.7
USP54-204ENST00000422491 PAGE2BQ5JRK9 111 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms