RNA–Protein interactions for RNA: ENST00000420820.6

CROCCP3-202, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

BASIC

Gene CROCCP3, Length 1,947 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-202ENST00000420820 RAG1P15918 1043 aa18.88■□□□□ 0.61
CROCCP3-202ENST00000420820 XRCC1P18887 633 aaPredicted RBP18.88■□□□□ 0.61
CROCCP3-202ENST00000420820 ALDH1A3P47895 512 aa18.88■□□□□ 0.61
CROCCP3-202ENST00000420820 TRAF2Q12933 501 aa18.88■□□□□ 0.61
CROCCP3-202ENST00000420820 ART3Q13508 389 aa18.88■□□□□ 0.61
CROCCP3-202ENST00000420820 GSTA3Q16772 222 aa18.88■□□□□ 0.61
CROCCP3-202ENST00000420820 INO80DQ53TQ3 878 aaPredicted RBP18.88■□□□□ 0.61
CROCCP3-202ENST00000420820 CLEC6AQ6EIG7 209 aa18.88■□□□□ 0.61
CROCCP3-202ENST00000420820 PAQR3Q6TCH7 311 aa18.88■□□□□ 0.61
CROCCP3-202ENST00000420820 GK5Q6ZS86 529 aa18.88■□□□□ 0.61
CROCCP3-202ENST00000420820 DEFB128Q7Z7B8 93 aa18.88■□□□□ 0.61
CROCCP3-202ENST00000420820 HERC6Q8IVU3 1022 aa18.88■□□□□ 0.61
CROCCP3-202ENST00000420820 TTC30BQ8N4P2 665 aa18.88■□□□□ 0.61
CROCCP3-202ENST00000420820 LPCAT1Q8NF37 534 aa18.88■□□□□ 0.61
CROCCP3-202ENST00000420820 NPAS2Q99743 824 aa18.88■□□□□ 0.61
CROCCP3-202ENST00000420820 TAS2R13Q9NYV9 303 aa18.88■□□□□ 0.61
CROCCP3-202ENST00000420820 LHX3Q9UBR4 397 aa18.88■□□□□ 0.61
CROCCP3-202ENST00000420820 PACSIN3Q9UKS6 424 aa18.88■□□□□ 0.61
CROCCP3-202ENST00000420820 OR51B4Q9Y5P0 310 aa18.88■□□□□ 0.61
CROCCP3-202ENST00000420820 H7C0S8 307 aa18.88■□□□□ 0.61
CROCCP3-202ENST00000420820 RHOBTB1O94844 696 aa18.88■□□□□ 0.61
CROCCP3-202ENST00000420820 C1RP00736 705 aa18.88■□□□□ 0.61
CROCCP3-202ENST00000420820 IRF1P10914 325 aa18.88■□□□□ 0.61
CROCCP3-202ENST00000420820 ENO3P13929 434 aaPredicted RBP18.88■□□□□ 0.61
CROCCP3-202ENST00000420820 ATP6V0D1P61421 351 aa18.88■□□□□ 0.61
CROCCP3-202ENST00000420820 XIAPP98170 497 aa18.88■□□□□ 0.61
CROCCP3-202ENST00000420820 RAB33AQ14088 237 aa18.88■□□□□ 0.61
CROCCP3-202ENST00000420820 LRP8Q14114 963 aa18.88■□□□□ 0.61
CROCCP3-202ENST00000420820 MAPRE2Q15555 327 aa18.88■□□□□ 0.61
CROCCP3-202ENST00000420820 PDSS2Q86YH6 399 aa18.88■□□□□ 0.61
CROCCP3-202ENST00000420820 HERC2P3Q9BVR0 1158 aa18.88■□□□□ 0.61
CROCCP3-202ENST00000420820 ADGRE3Q9BY15 652 aa18.88■□□□□ 0.61
CROCCP3-202ENST00000420820 MUC3BQ9H195 1237 aa18.88■□□□□ 0.61
CROCCP3-202ENST00000420820 DNMT3BQ9UBC3 853 aaKnown RBP18.88■□□□□ 0.61
CROCCP3-202ENST00000420820 IKZF3Q9UKT9 509 aa18.88■□□□□ 0.61
CROCCP3-202ENST00000420820 TRIM17Q9Y577 477 aa18.88■□□□□ 0.61
CROCCP3-202ENST00000420820 LTBP2Q14767 1821 aa18.87■□□□□ 0.61
CROCCP3-202ENST00000420820 PSMD12O00232 456 aaPredicted RBP18.87■□□□□ 0.61
CROCCP3-202ENST00000420820 FBP2O00757 339 aa18.87■□□□□ 0.61
CROCCP3-202ENST00000420820 FZD6O60353 706 aa18.87■□□□□ 0.61
CROCCP3-202ENST00000420820 SNAP91O60641 907 aa18.87■□□□□ 0.61
CROCCP3-202ENST00000420820 SIX3O95343 332 aaPredicted RBP18.87■□□□□ 0.61
CROCCP3-202ENST00000420820 TSPAN8P19075 237 aa18.87■□□□□ 0.61
CROCCP3-202ENST00000420820 ME2P23368 584 aa18.87■□□□□ 0.61
CROCCP3-202ENST00000420820 FMO4P31512 558 aa18.87■□□□□ 0.61
CROCCP3-202ENST00000420820 CDH13P55290 713 aa18.87■□□□□ 0.61
CROCCP3-202ENST00000420820 STX5Q13190 355 aa18.87■□□□□ 0.61
CROCCP3-202ENST00000420820 FASTKQ14296 549 aaKnown RBP18.87■□□□□ 0.61
CROCCP3-202ENST00000420820 PIANPQ8IYJ0 282 aa18.87■□□□□ 0.61
CROCCP3-202ENST00000420820 SLC39A11Q8N1S5 342 aa18.87■□□□□ 0.61
CROCCP3-202ENST00000420820 RYBPQ8N488 228 aaPredicted RBP18.87■□□□□ 0.61
CROCCP3-202ENST00000420820 STAG3L4Q8TBR4 150 aa18.87■□□□□ 0.61
CROCCP3-202ENST00000420820 ADAMTS19Q8TE59 1207 aa18.87■□□□□ 0.61
CROCCP3-202ENST00000420820 C19orf60Q96EN9 201 aa18.87■□□□□ 0.61
CROCCP3-202ENST00000420820 C3orf30Q96M34 536 aa18.87■□□□□ 0.61
CROCCP3-202ENST00000420820 NR1H4Q96RI1 486 aaPredicted RBP18.87■□□□□ 0.61
CROCCP3-202ENST00000420820 PPP1R12CQ9BZL4 782 aa18.87■□□□□ 0.61
CROCCP3-202ENST00000420820 PSMD13Q9UNM6 376 aa18.87■□□□□ 0.61
CROCCP3-202ENST00000420820 VPS9D1Q9Y2B5 631 aa18.87■□□□□ 0.61
CROCCP3-202ENST00000420820 PCDHGA7Q9Y5G6 932 aa18.87■□□□□ 0.61
CROCCP3-202ENST00000420820 DNAJC15Q9Y5T4 150 aa18.87■□□□□ 0.61
CROCCP3-202ENST00000420820 UBA6A0AVT1 1052 aaPredicted RBP18.86■□□□□ 0.61
CROCCP3-202ENST00000420820 ACOT8O14734 319 aa18.86■□□□□ 0.61
CROCCP3-202ENST00000420820 PEX1O43933 1283 aa18.86■□□□□ 0.61
CROCCP3-202ENST00000420820 KLK8O60259 260 aa18.86■□□□□ 0.61
CROCCP3-202ENST00000420820 NDUFS3O75489 264 aa18.86■□□□□ 0.61
CROCCP3-202ENST00000420820 BCAS2O75934 225 aaPredicted RBP18.86■□□□□ 0.61
CROCCP3-202ENST00000420820 SRP72O76094 671 aaKnown RBP18.86■□□□□ 0.61
CROCCP3-202ENST00000420820 ACADVLP49748 655 aa18.86■□□□□ 0.61
CROCCP3-202ENST00000420820 CDKN1CP49918 316 aaPredicted RBP18.86■□□□□ 0.61
CROCCP3-202ENST00000420820 MS4A2Q01362 244 aa18.86■□□□□ 0.61
CROCCP3-202ENST00000420820 FAM219BQ5XKK7 198 aa18.86■□□□□ 0.61
CROCCP3-202ENST00000420820 KANK2Q63ZY3 851 aa18.86■□□□□ 0.61
CROCCP3-202ENST00000420820 RAB44Q7Z6P3 723 aaPredicted RBP18.86■□□□□ 0.61
CROCCP3-202ENST00000420820 DNAJB7Q7Z6W7 309 aaPredicted RBP18.86■□□□□ 0.61
CROCCP3-202ENST00000420820 HIPK4Q8NE63 616 aa18.86■□□□□ 0.61
CROCCP3-202ENST00000420820 ALG14Q96F25 216 aa18.86■□□□□ 0.61
CROCCP3-202ENST00000420820 DEFB118Q96PH6 123 aa18.86■□□□□ 0.61
CROCCP3-202ENST00000420820 C1QTNF3Q9BXJ4 246 aa18.86■□□□□ 0.61
CROCCP3-202ENST00000420820 MRPL1Q9BYD6 325 aaKnown RBP18.86■□□□□ 0.61
CROCCP3-202ENST00000420820 SAGE1Q9NXZ1 904 aa18.86■□□□□ 0.61
CROCCP3-202ENST00000420820 LRRC14BA6NHZ5 514 aa18.86■□□□□ 0.61
CROCCP3-202ENST00000420820 STX16-NPEPL1H3BU86 382 aa18.86■□□□□ 0.61
CROCCP3-202ENST00000420820 PPP6CO00743 305 aa18.86■□□□□ 0.61
CROCCP3-202ENST00000420820 TSPAN12O95859 305 aa18.86■□□□□ 0.61
CROCCP3-202ENST00000420820 OLFM2O95897 454 aa18.86■□□□□ 0.61
CROCCP3-202ENST00000420820 MZF1P28698 734 aaPredicted RBP18.86■□□□□ 0.61
CROCCP3-202ENST00000420820 CLCN4P51793 760 aa18.86■□□□□ 0.61
CROCCP3-202ENST00000420820 PKNOX1P55347 436 aa18.86■□□□□ 0.61
CROCCP3-202ENST00000420820 IKBKEQ14164 716 aa18.86■□□□□ 0.61
CROCCP3-202ENST00000420820 VEPH1Q14D04 833 aa18.86■□□□□ 0.61
CROCCP3-202ENST00000420820 PFKFB4Q16877 469 aa18.86■□□□□ 0.61
CROCCP3-202ENST00000420820 PSAPL1Q6NUJ1 521 aa18.86■□□□□ 0.61
CROCCP3-202ENST00000420820 C8orf82Q6P1X6 216 aaPredicted RBP18.86■□□□□ 0.61
CROCCP3-202ENST00000420820 LINGO4Q6UY18 593 aa18.86■□□□□ 0.61
CROCCP3-202ENST00000420820 Q6ZNB5 142 aa18.86■□□□□ 0.61
CROCCP3-202ENST00000420820 ZNF689Q96CS4 500 aaPredicted RBP18.86■□□□□ 0.61
CROCCP3-202ENST00000420820 FEM1AQ9BSK4 669 aa18.86■□□□□ 0.61
CROCCP3-202ENST00000420820 VCX3BQ9H321 246 aa18.86■□□□□ 0.61
CROCCP3-202ENST00000420820 CACNA2D2Q9NY47 1150 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms