RNA–Protein interactions for RNA: ENST00000418600.6

SYNGAP1-202, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 5,828 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-202ENST00000418600 ITPKBP27987 946 aa16.9■□□□□ 0.3
SYNGAP1-202ENST00000418600 SEPHS1P49903 392 aa16.9■□□□□ 0.3
SYNGAP1-202ENST00000418600 KCNMA1Q12791 1236 aa16.9■□□□□ 0.3
SYNGAP1-202ENST00000418600 MYLK3Q32MK0 819 aa16.9■□□□□ 0.3
SYNGAP1-202ENST00000418600 SEL1L3Q68CR1 1132 aa16.9■□□□□ 0.3
SYNGAP1-202ENST00000418600 SRFBP1Q8NEF9 429 aaKnown RBP16.9■□□□□ 0.3
SYNGAP1-202ENST00000418600 PSMG2Q969U7 264 aa16.9■□□□□ 0.3
SYNGAP1-202ENST00000418600 PAPOLBQ9NRJ5 636 aaKnown RBP16.9■□□□□ 0.3
SYNGAP1-202ENST00000418600 TRPM3Q9HCF6 1732 aaPredicted RBP16.9■□□□□ 0.3
SYNGAP1-202ENST00000418600 ILVBLA1L0T0 632 aa16.9■□□□□ 0.3
SYNGAP1-202ENST00000418600 YJEFN3A6XGL0 299 aa16.9■□□□□ 0.3
SYNGAP1-202ENST00000418600 E7ENQ6 273 aa16.9■□□□□ 0.3
SYNGAP1-202ENST00000418600 PIGNO95427 931 aa16.9■□□□□ 0.3
SYNGAP1-202ENST00000418600 BUD31P41223 144 aaPredicted RBP16.9■□□□□ 0.3
SYNGAP1-202ENST00000418600 WLSQ5T9L3 541 aa16.9■□□□□ 0.3
SYNGAP1-202ENST00000418600 GAL3ST4Q96RP7 486 aa16.9■□□□□ 0.3
SYNGAP1-202ENST00000418600 PRRG3Q9BZD7 231 aa16.9■□□□□ 0.3
SYNGAP1-202ENST00000418600 UBE2ZQ9H832 354 aaPredicted RBP16.9■□□□□ 0.3
SYNGAP1-202ENST00000418600 TAS2R14Q9NYV8 317 aa16.9■□□□□ 0.3
SYNGAP1-202ENST00000418600 V9GYQ6 96 aa16.9■□□□□ 0.3
SYNGAP1-202ENST00000418600 TMEM150CB9EJG8 249 aa16.9■□□□□ 0.3
SYNGAP1-202ENST00000418600 UBXN7O94888 489 aa16.9■□□□□ 0.3
SYNGAP1-202ENST00000418600 ASGR2P07307 311 aa16.9■□□□□ 0.3
SYNGAP1-202ENST00000418600 EDNRBP24530 442 aa16.9■□□□□ 0.3
SYNGAP1-202ENST00000418600 STXBP1P61764 594 aaKnown RBP16.9■□□□□ 0.3
SYNGAP1-202ENST00000418600 ANKRD54Q6NXT1 300 aa16.9■□□□□ 0.3
SYNGAP1-202ENST00000418600 RNF44Q7L0R7 432 aa16.9■□□□□ 0.3
SYNGAP1-202ENST00000418600 AGGF1Q8N302 714 aaeCLIP16.9■□□□□ 0.3
SYNGAP1-202ENST00000418600 ZNF514Q96K75 400 aaPredicted RBP16.9■□□□□ 0.3
SYNGAP1-202ENST00000418600 KRT84Q9NSB2 600 aa16.9■□□□□ 0.3
SYNGAP1-202ENST00000418600 DDX28Q9NUL7 540 aaKnown RBP16.9■□□□□ 0.3
SYNGAP1-202ENST00000418600 C19orf25Q9UFG5 118 aaPredicted RBP16.9■□□□□ 0.3
SYNGAP1-202ENST00000418600 UPK3BL1B0FP48 263 aa16.9■□□□□ 0.3
SYNGAP1-202ENST00000418600 UPK3BL2E5RIL1 263 aa16.9■□□□□ 0.3
SYNGAP1-202ENST00000418600 SLCO1B7G3V0H7 640 aa16.9■□□□□ 0.3
SYNGAP1-202ENST00000418600 IL12BP29460 328 aa16.9■□□□□ 0.3
SYNGAP1-202ENST00000418600 ZNF155Q12901 538 aaPredicted RBP16.9■□□□□ 0.3
SYNGAP1-202ENST00000418600 DHCR24Q15392 516 aa16.9■□□□□ 0.3
SYNGAP1-202ENST00000418600 PITRM1Q5JRX3 1037 aa16.9■□□□□ 0.3
SYNGAP1-202ENST00000418600 PIK3R6Q5UE93 754 aa16.9■□□□□ 0.3
SYNGAP1-202ENST00000418600 POLNQ7Z5Q5 900 aa16.9■□□□□ 0.3
SYNGAP1-202ENST00000418600 ACTRT1Q8TDG2 376 aa16.9■□□□□ 0.3
SYNGAP1-202ENST00000418600 FAM120BQ96EK7 910 aaKnown RBP16.9■□□□□ 0.3
SYNGAP1-202ENST00000418600 MTRRQ9UBK8 725 aa16.9■□□□□ 0.3
SYNGAP1-202ENST00000418600 CCDC159P0C7I6 412 aa16.9■□□□□ 0.3
SYNGAP1-202ENST00000418600 KCNQ1P51787 676 aa16.9■□□□□ 0.3
SYNGAP1-202ENST00000418600 CDK16Q00536 496 aa16.9■□□□□ 0.3
SYNGAP1-202ENST00000418600 RAB33AQ14088 237 aa16.9■□□□□ 0.3
SYNGAP1-202ENST00000418600 UNC5BQ8IZJ1 945 aa16.9■□□□□ 0.3
SYNGAP1-202ENST00000418600 TOP1MTQ969P6 601 aa16.9■□□□□ 0.3
SYNGAP1-202ENST00000418600 NDNQ99608 321 aa16.9■□□□□ 0.3
SYNGAP1-202ENST00000418600 CRTAC1Q9NQ79 661 aa16.9■□□□□ 0.3
SYNGAP1-202ENST00000418600 TK2O00142 265 aa16.89■□□□□ 0.29
SYNGAP1-202ENST00000418600 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.89■□□□□ 0.29
SYNGAP1-202ENST00000418600 TDGQ13569 410 aa16.89■□□□□ 0.29
SYNGAP1-202ENST00000418600 LRRTM4Q86VH4 590 aa16.89■□□□□ 0.29
SYNGAP1-202ENST00000418600 FAM126BQ8IXS8 530 aa16.89■□□□□ 0.29
SYNGAP1-202ENST00000418600 SMG8Q8ND04 991 aaKnown RBP16.89■□□□□ 0.29
SYNGAP1-202ENST00000418600 STK32AQ8WU08 396 aa16.89■□□□□ 0.29
SYNGAP1-202ENST00000418600 LRRN4Q8WUT4 740 aa16.89■□□□□ 0.29
SYNGAP1-202ENST00000418600 TNFRSF25Q93038 417 aa16.89■□□□□ 0.29
SYNGAP1-202ENST00000418600 WDR24Q96S15 920 aa16.89■□□□□ 0.29
SYNGAP1-202ENST00000418600 A0A096LPK6 155 aa16.89■□□□□ 0.29
SYNGAP1-202ENST00000418600 DLDP09622 509 aaKnown RBP16.89■□□□□ 0.29
SYNGAP1-202ENST00000418600 TBCDQ9BTW9 1192 aa16.89■□□□□ 0.29
SYNGAP1-202ENST00000418600 SGK2Q9HBY8 427 aa16.89■□□□□ 0.29
SYNGAP1-202ENST00000418600 NFKBIL1Q9UBC1 381 aaPredicted RBP16.89■□□□□ 0.29
SYNGAP1-202ENST00000418600 FBXW2Q9UKT8 454 aa16.89■□□□□ 0.29
SYNGAP1-202ENST00000418600 CAPN14A8MX76 684 aa16.89■□□□□ 0.29
SYNGAP1-202ENST00000418600 RRP8O43159 456 aaKnown RBP16.89■□□□□ 0.29
SYNGAP1-202ENST00000418600 B3GALT2O43825 422 aa16.89■□□□□ 0.29
SYNGAP1-202ENST00000418600 VEGFDO43915 354 aa16.89■□□□□ 0.29
SYNGAP1-202ENST00000418600 SCN2BO60939 215 aa16.89■□□□□ 0.29
SYNGAP1-202ENST00000418600 ZNF8P17098 575 aaPredicted RBP16.89■□□□□ 0.29
SYNGAP1-202ENST00000418600 ENPEPQ07075 957 aa16.89■□□□□ 0.29
SYNGAP1-202ENST00000418600 PFKFB4Q16877 469 aa16.89■□□□□ 0.29
SYNGAP1-202ENST00000418600 TMPRSS11BQ86T26 416 aa16.89■□□□□ 0.29
SYNGAP1-202ENST00000418600 C4orf32Q8N8J7 132 aa16.89■□□□□ 0.29
SYNGAP1-202ENST00000418600 CCT7Q99832 543 aa16.89■□□□□ 0.29
SYNGAP1-202ENST00000418600 PDE7BQ9NP56 450 aa16.89■□□□□ 0.29
SYNGAP1-202ENST00000418600 ARHGEF3Q9NR81 526 aa16.89■□□□□ 0.29
SYNGAP1-202ENST00000418600 N6AMT1Q9Y5N5 214 aa16.89■□□□□ 0.29
SYNGAP1-202ENST00000418600 NT5EP21589 574 aa16.89■□□□□ 0.29
SYNGAP1-202ENST00000418600 DSG1Q02413 1049 aa16.89■□□□□ 0.29
SYNGAP1-202ENST00000418600 ARHGAP40Q5TG30 622 aa16.89■□□□□ 0.29
SYNGAP1-202ENST00000418600 SH3RF1Q7Z6J0 888 aa16.89■□□□□ 0.29
SYNGAP1-202ENST00000418600 TMEM125Q96AQ2 219 aa16.89■□□□□ 0.29
SYNGAP1-202ENST00000418600 CSPG4P5Q96PW8 444 aa16.89■□□□□ 0.29
SYNGAP1-202ENST00000418600 RIOK2Q9BVS4 552 aaKnown RBP16.89■□□□□ 0.29
SYNGAP1-202ENST00000418600 GDAP2Q9NXN4 497 aa16.89■□□□□ 0.29
SYNGAP1-202ENST00000418600 KLRC4O43908 158 aa16.88■□□□□ 0.29
SYNGAP1-202ENST00000418600 LRIG2O94898 1065 aa16.88■□□□□ 0.29
SYNGAP1-202ENST00000418600 ZNF682O95780 498 aa16.88■□□□□ 0.29
SYNGAP1-202ENST00000418600 PLGP00747 810 aaPredicted RBP16.88■□□□□ 0.29
SYNGAP1-202ENST00000418600 PIGRP01833 764 aa16.88■□□□□ 0.29
SYNGAP1-202ENST00000418600 HLA-DQA2P01906 255 aa16.88■□□□□ 0.29
SYNGAP1-202ENST00000418600 C22orf39Q6P5X5 142 aa16.88■□□□□ 0.29
SYNGAP1-202ENST00000418600 KRT73Q86Y46 540 aa16.88■□□□□ 0.29
SYNGAP1-202ENST00000418600 EME1Q96AY2 570 aa16.88■□□□□ 0.29
SYNGAP1-202ENST00000418600 IKZF4Q9H2S9 585 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms