RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 GOLGA6AQ9NYA3 693 aa25.26■■□□□ 1.63
VEGFA-208ENST00000417285 PCDHGA7Q9Y5G6 932 aa25.26■■□□□ 1.63
VEGFA-208ENST00000417285 RNF215Q9Y6U7 377 aa25.26■■□□□ 1.63
VEGFA-208ENST00000417285 MTA2O94776 668 aa25.25■■□□□ 1.63
VEGFA-208ENST00000417285 FUCA1P04066 466 aa25.25■■□□□ 1.63
VEGFA-208ENST00000417285 IVLP07476 585 aa25.25■■□□□ 1.63
VEGFA-208ENST00000417285 LRRC66Q68CR7 880 aa25.25■■□□□ 1.63
VEGFA-208ENST00000417285 ADAMTSL4Q6UY14 1074 aa25.25■■□□□ 1.63
VEGFA-208ENST00000417285 SPRED1Q7Z699 444 aa25.25■■□□□ 1.63
VEGFA-208ENST00000417285 B3GNT8Q7Z7M8 397 aa25.25■■□□□ 1.63
VEGFA-208ENST00000417285 C17orf82Q86X59 251 aaPredicted RBP25.25■■□□□ 1.63
VEGFA-208ENST00000417285 NRROSQ86YC3 692 aa25.25■■□□□ 1.63
VEGFA-208ENST00000417285 PQLC3Q8N755 202 aa25.25■■□□□ 1.63
VEGFA-208ENST00000417285 CCNYQ8ND76 341 aa25.25■■□□□ 1.63
VEGFA-208ENST00000417285 ARRDC2Q8TBH0 407 aa25.25■■□□□ 1.63
VEGFA-208ENST00000417285 RAPGEF5Q92565 580 aa25.25■■□□□ 1.63
VEGFA-208ENST00000417285 SCARF2Q96GP6 870 aaPredicted RBP25.25■■□□□ 1.63
VEGFA-208ENST00000417285 ABCG8Q9H221 673 aa25.25■■□□□ 1.63
VEGFA-208ENST00000417285 SPATS2LQ9NUQ6 558 aaKnown RBP25.25■■□□□ 1.63
VEGFA-208ENST00000417285 SUFUQ9UMX1 484 aa25.25■■□□□ 1.63
VEGFA-208ENST00000417285 TTLL3Q9Y4R7 772 aa25.25■■□□□ 1.63
VEGFA-208ENST00000417285 ZNF487B1APH4 448 aa25.24■■□□□ 1.63
VEGFA-208ENST00000417285 FGF1P05230 155 aa25.24■■□□□ 1.63
VEGFA-208ENST00000417285 GNPDA1P46926 289 aa25.24■■□□□ 1.63
VEGFA-208ENST00000417285 DSC2Q02487 901 aa25.24■■□□□ 1.63
VEGFA-208ENST00000417285 GBE1Q04446 702 aa25.24■■□□□ 1.63
VEGFA-208ENST00000417285 ZFP36L1Q07352 338 aaKnown RBP25.24■■□□□ 1.63
VEGFA-208ENST00000417285 PTPRRQ15256 657 aa25.24■■□□□ 1.63
VEGFA-208ENST00000417285 CLPPQ16740 277 aaPredicted RBP25.24■■□□□ 1.63
VEGFA-208ENST00000417285 VSIG1Q86XK7 387 aa25.24■■□□□ 1.63
VEGFA-208ENST00000417285 ZDHHC1Q8WTX9 485 aa25.24■■□□□ 1.63
VEGFA-208ENST00000417285 SLC39A7Q92504 469 aa25.24■■□□□ 1.63
VEGFA-208ENST00000417285 HDAC11Q96DB2 347 aa25.24■■□□□ 1.63
VEGFA-208ENST00000417285 RNF157Q96PX1 679 aa25.24■■□□□ 1.63
VEGFA-208ENST00000417285 TDRD1Q9BXT4 1180 aaKnown RBP25.24■■□□□ 1.63
VEGFA-208ENST00000417285 FOXP3Q9BZS1 431 aa25.24■■□□□ 1.63
VEGFA-208ENST00000417285 TAAR2Q9P1P5 351 aa25.24■■□□□ 1.63
VEGFA-208ENST00000417285 INTUQ9ULD6 942 aa25.24■■□□□ 1.63
VEGFA-208ENST00000417285 CHKBQ9Y259 395 aa25.24■■□□□ 1.63
VEGFA-208ENST00000417285 CFAP46Q8IYW2 2715 aa25.24■■□□□ 1.63
VEGFA-208ENST00000417285 GCN1Q92616 2671 aaKnown RBP25.23■■□□□ 1.63
VEGFA-208ENST00000417285 LRRD1A4D1F6 860 aa25.23■■□□□ 1.63
VEGFA-208ENST00000417285 UGT1A5P35504 534 aa25.23■■□□□ 1.63
VEGFA-208ENST00000417285 TBX2Q13207 712 aaPredicted RBP25.23■■□□□ 1.63
VEGFA-208ENST00000417285 SARM1Q6SZW1 724 aa25.23■■□□□ 1.63
VEGFA-208ENST00000417285 CCDC13Q8IYE1 715 aa25.23■■□□□ 1.63
VEGFA-208ENST00000417285 TRAF3IP1Q8TDR0 691 aaPredicted RBP25.23■■□□□ 1.63
VEGFA-208ENST00000417285 LYSMD1Q96S90 227 aa25.23■■□□□ 1.63
VEGFA-208ENST00000417285 TRIM5Q9C035 493 aa25.23■■□□□ 1.63
VEGFA-208ENST00000417285 PCDH9Q9HC56 1237 aa25.23■■□□□ 1.63
VEGFA-208ENST00000417285 DTLQ9NZJ0 730 aa25.23■■□□□ 1.63
VEGFA-208ENST00000417285 SMG1Q96Q15 3661 aaKnown RBP25.23■■□□□ 1.63
VEGFA-208ENST00000417285 SHROOM3Q8TF72 1996 aa25.23■■□□□ 1.63
VEGFA-208ENST00000417285 LRP4O75096 1905 aa25.22■■□□□ 1.63
VEGFA-208ENST00000417285 COL27A1Q8IZC6 1860 aaPredicted RBP25.22■■□□□ 1.63
VEGFA-208ENST00000417285 PMS2P1A4D2B8 440 aa25.22■■□□□ 1.63
VEGFA-208ENST00000417285 RHPN2P1A8MT19 583 aa25.22■■□□□ 1.63
VEGFA-208ENST00000417285 PRLP01236 227 aa25.22■■□□□ 1.63
VEGFA-208ENST00000417285 ADCY8P40145 1251 aa25.22■■□□□ 1.63
VEGFA-208ENST00000417285 POLD2P49005 469 aa25.22■■□□□ 1.63
VEGFA-208ENST00000417285 STC1P52823 247 aa25.22■■□□□ 1.63
VEGFA-208ENST00000417285 B4GALNT1Q00973 533 aa25.22■■□□□ 1.63
VEGFA-208ENST00000417285 CTBSQ01459 385 aa25.22■■□□□ 1.63
VEGFA-208ENST00000417285 RHDQ02161 417 aa25.22■■□□□ 1.63
VEGFA-208ENST00000417285 VAC14Q08AM6 782 aa25.22■■□□□ 1.63
VEGFA-208ENST00000417285 SLC10A2Q12908 348 aaPredicted RBP25.22■■□□□ 1.63
VEGFA-208ENST00000417285 IHHQ14623 411 aa25.22■■□□□ 1.63
VEGFA-208ENST00000417285 ODF2Q5BJF6 829 aa25.22■■□□□ 1.63
VEGFA-208ENST00000417285 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP25.22■■□□□ 1.63
VEGFA-208ENST00000417285 EXD1Q8NHP7 514 aa25.22■■□□□ 1.63
VEGFA-208ENST00000417285 SNRNP27Q8WVK2 155 aaKnown RBP25.22■■□□□ 1.63
VEGFA-208ENST00000417285 MAK16Q9BXY0 300 aaKnown RBP25.22■■□□□ 1.63
VEGFA-208ENST00000417285 CD84Q9UIB8 345 aa25.22■■□□□ 1.63
VEGFA-208ENST00000417285 UNC13CQ8NB66 2214 aa25.21■■□□□ 1.63
VEGFA-208ENST00000417285 CAPN8A6NHC0 703 aa25.21■■□□□ 1.63
VEGFA-208ENST00000417285 JCHAINP01591 159 aa25.21■■□□□ 1.63
VEGFA-208ENST00000417285 JMJD7P0C870 316 aa25.21■■□□□ 1.63
VEGFA-208ENST00000417285 SLC1A1P43005 524 aa25.21■■□□□ 1.63
VEGFA-208ENST00000417285 GPR3P46089 330 aa25.21■■□□□ 1.63
VEGFA-208ENST00000417285 NIPAL4Q0D2K0 466 aa25.21■■□□□ 1.63
VEGFA-208ENST00000417285 LRRC38Q5VT99 294 aa25.21■■□□□ 1.63
VEGFA-208ENST00000417285 ZNF438Q7Z4V0 828 aa25.21■■□□□ 1.63
VEGFA-208ENST00000417285 PIM3Q86V86 326 aa25.21■■□□□ 1.63
VEGFA-208ENST00000417285 SFTPA2Q8IWL1 248 aa25.21■■□□□ 1.63
VEGFA-208ENST00000417285 SCAMP4Q969E2 229 aa25.21■■□□□ 1.63
VEGFA-208ENST00000417285 WBP1Q96G27 269 aa25.21■■□□□ 1.63
VEGFA-208ENST00000417285 CDH19Q9H159 772 aa25.21■■□□□ 1.63
VEGFA-208ENST00000417285 SUDS3Q9H7L9 328 aaPredicted RBP25.21■■□□□ 1.63
VEGFA-208ENST00000417285 CPNE5Q9HCH3 593 aa25.21■■□□□ 1.63
VEGFA-208ENST00000417285 EIF2AK3Q9NZJ5 1116 aaKnown RBP25.21■■□□□ 1.63
VEGFA-208ENST00000417285 A0A0U1RQS6 177 aa25.2■■□□□ 1.62
VEGFA-208ENST00000417285 RGSL1A5PLK6 1076 aa25.2■■□□□ 1.62
VEGFA-208ENST00000417285 ERVH48-1M5A8F1 160 aa25.2■■□□□ 1.62
VEGFA-208ENST00000417285 NVLO15381 856 aaKnown RBP25.2■■□□□ 1.62
VEGFA-208ENST00000417285 B4GAT1O43505 415 aa25.2■■□□□ 1.62
VEGFA-208ENST00000417285 SOD1P00441 154 aa25.2■■□□□ 1.62
VEGFA-208ENST00000417285 HLA-DQB2P05538 268 aa25.2■■□□□ 1.62
VEGFA-208ENST00000417285 ZFXP17010 805 aaPredicted RBP25.2■■□□□ 1.62
VEGFA-208ENST00000417285 SLC5A2P31639 672 aa25.2■■□□□ 1.62
VEGFA-208ENST00000417285 PPIDQ08752 370 aaKnown RBP25.2■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms