RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 MEIOBQ8N635 442 aa12.03□□□□□ -0.48
UBR4-205ENST00000417040 PMM1Q92871 262 aa12.03□□□□□ -0.48
UBR4-205ENST00000417040 ZNF670Q9BS34 389 aa12.03□□□□□ -0.48
UBR4-205ENST00000417040 INTS7Q9NVH2 962 aaKnown RBP12.03□□□□□ -0.48
UBR4-205ENST00000417040 OAS3Q9Y6K5 1087 aaKnown RBP12.03□□□□□ -0.48
UBR4-205ENST00000417040 CLUHO75153 1309 aa12.03□□□□□ -0.48
UBR4-205ENST00000417040 IQCF5A8MTL0 148 aa12.03□□□□□ -0.48
UBR4-205ENST00000417040 MAGEC1O60732 1142 aa12.03□□□□□ -0.48
UBR4-205ENST00000417040 OTCP00480 354 aa12.03□□□□□ -0.48
UBR4-205ENST00000417040 C2P06681 752 aa12.03□□□□□ -0.48
UBR4-205ENST00000417040 FOXN2P32314 431 aa12.03□□□□□ -0.48
UBR4-205ENST00000417040 RPS9P46781 194 aaKnown RBP12.03□□□□□ -0.48
UBR4-205ENST00000417040 HUNKP57058 714 aa12.03□□□□□ -0.48
UBR4-205ENST00000417040 SGCGQ13326 291 aa12.03□□□□□ -0.48
UBR4-205ENST00000417040 USP45Q70EL2 814 aa12.03□□□□□ -0.48
UBR4-205ENST00000417040 IL31RAQ8NI17 732 aa12.03□□□□□ -0.48
UBR4-205ENST00000417040 ELOVL4Q9GZR5 314 aa12.03□□□□□ -0.48
UBR4-205ENST00000417040 MAGEL2Q9UJ55 1249 aa12.03□□□□□ -0.48
UBR4-205ENST00000417040 FAM240BA0A1B0GVZ2 78 aa12.03□□□□□ -0.48
UBR4-205ENST00000417040 ABHD14A-ACY1A0A1B0GW23 586 aa12.03□□□□□ -0.48
UBR4-205ENST00000417040 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.03□□□□□ -0.48
UBR4-205ENST00000417040 CYP2A6P11509 494 aaPredicted RBP12.03□□□□□ -0.48
UBR4-205ENST00000417040 SLC6A2P23975 617 aa12.03□□□□□ -0.48
UBR4-205ENST00000417040 SLC9B1Q4ZJI4 515 aa12.03□□□□□ -0.48
UBR4-205ENST00000417040 THOC7Q6I9Y2 204 aaKnown RBP12.03□□□□□ -0.48
UBR4-205ENST00000417040 PCDHAC1Q9H158 963 aa12.03□□□□□ -0.48
UBR4-205ENST00000417040 EXD2Q9NVH0 621 aa12.03□□□□□ -0.48
UBR4-205ENST00000417040 ZNF232Q9UNY5 417 aa12.03□□□□□ -0.48
UBR4-205ENST00000417040 ARHGEF33A8MVX0 844 aa12.03□□□□□ -0.48
UBR4-205ENST00000417040 KPNA6O60684 536 aa12.03□□□□□ -0.48
UBR4-205ENST00000417040 ERAL1O75616 437 aaKnown RBP12.03□□□□□ -0.48
UBR4-205ENST00000417040 HNRNPH3P31942 346 aaKnown RBP12.03□□□□□ -0.48
UBR4-205ENST00000417040 CXCR3P49682 368 aa12.03□□□□□ -0.48
UBR4-205ENST00000417040 ADGRD1Q6QNK2 874 aa12.03□□□□□ -0.48
UBR4-205ENST00000417040 STK40Q8N2I9 435 aa12.03□□□□□ -0.48
UBR4-205ENST00000417040 CPSF7Q8N684 471 aaKnown RBP12.03□□□□□ -0.48
UBR4-205ENST00000417040 AGBL3Q8NEM8 1001 aa12.03□□□□□ -0.48
UBR4-205ENST00000417040 HOPXQ9BPY8 73 aaPredicted RBP12.03□□□□□ -0.48
UBR4-205ENST00000417040 EQTNQ9NQ60 294 aa12.03□□□□□ -0.48
UBR4-205ENST00000417040 SMPD3Q9NY59 655 aaPredicted RBP12.03□□□□□ -0.48
UBR4-205ENST00000417040 FBXO5Q9UKT4 447 aa12.03□□□□□ -0.48
UBR4-205ENST00000417040 RPL26L1Q9UNX3 145 aaKnown RBP12.03□□□□□ -0.48
UBR4-205ENST00000417040 VWA7Q9Y334 891 aa12.03□□□□□ -0.48
UBR4-205ENST00000417040 MFHAS1Q9Y4C4 1052 aa12.03□□□□□ -0.48
UBR4-205ENST00000417040 TRIM17Q9Y577 477 aa12.03□□□□□ -0.48
UBR4-205ENST00000417040 NR2E3Q9Y5X4 410 aa12.03□□□□□ -0.48
UBR4-205ENST00000417040 ABLIM1O14639 778 aa12.02□□□□□ -0.48
UBR4-205ENST00000417040 MFSD11O43934 449 aa12.02□□□□□ -0.48
UBR4-205ENST00000417040 CASP9P55211 416 aa12.02□□□□□ -0.48
UBR4-205ENST00000417040 IRF9Q00978 393 aa12.02□□□□□ -0.48
UBR4-205ENST00000417040 TMEM214Q6NUQ4 689 aaKnown RBP12.02□□□□□ -0.48
UBR4-205ENST00000417040 RELTQ969Z4 430 aa12.02□□□□□ -0.48
UBR4-205ENST00000417040 TBC1D24Q9ULP9 559 aa12.02□□□□□ -0.48
UBR4-205ENST00000417040 CNTNAP4Q9C0A0 1308 aa12.02□□□□□ -0.48
UBR4-205ENST00000417040 FPGTO14772 594 aa12.02□□□□□ -0.49
UBR4-205ENST00000417040 MSI1O43347 362 aaKnown RBP12.02□□□□□ -0.49
UBR4-205ENST00000417040 ANGPTL1O95841 491 aa12.02□□□□□ -0.49
UBR4-205ENST00000417040 HIST1H2ABP04908 130 aa12.02□□□□□ -0.49
UBR4-205ENST00000417040 CAPSQ13938 189 aa12.02□□□□□ -0.49
UBR4-205ENST00000417040 INSCQ1MX18 579 aa12.02□□□□□ -0.49
UBR4-205ENST00000417040 ARL13AQ5H913 290 aaPredicted RBP12.02□□□□□ -0.49
UBR4-205ENST00000417040 HLA-DQA1Q5Y7H0 255 aa12.02□□□□□ -0.49
UBR4-205ENST00000417040 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.02□□□□□ -0.49
UBR4-205ENST00000417040 HIST3H2AQ7L7L0 130 aa12.02□□□□□ -0.49
UBR4-205ENST00000417040 ANKRD46Q86W74 232 aa12.02□□□□□ -0.49
UBR4-205ENST00000417040 HIST1H2ACQ93077 130 aa12.02□□□□□ -0.49
UBR4-205ENST00000417040 GTPBP3Q969Y2 492 aaKnown RBP12.02□□□□□ -0.49
UBR4-205ENST00000417040 TRIT1Q9H3H1 467 aaKnown RBP12.02□□□□□ -0.49
UBR4-205ENST00000417040 MAP4K5Q9Y4K4 846 aa12.02□□□□□ -0.49
UBR4-205ENST00000417040 FGF10O15520 208 aaPredicted RBP12.02□□□□□ -0.49
UBR4-205ENST00000417040 SGTAO43765 313 aa12.02□□□□□ -0.49
UBR4-205ENST00000417040 METTL18O95568 372 aa12.02□□□□□ -0.49
UBR4-205ENST00000417040 CYP3A4P08684 503 aa12.02□□□□□ -0.49
UBR4-205ENST00000417040 SLC26A2P50443 739 aa12.02□□□□□ -0.49
UBR4-205ENST00000417040 GDF10P55107 478 aa12.02□□□□□ -0.49
UBR4-205ENST00000417040 CDH15P55291 814 aa12.02□□□□□ -0.49
UBR4-205ENST00000417040 MFSD5Q6N075 450 aa12.02□□□□□ -0.49
UBR4-205ENST00000417040 PIGWQ7Z7B1 504 aa12.02□□□□□ -0.49
UBR4-205ENST00000417040 XYLT1Q86Y38 959 aa12.02□□□□□ -0.49
UBR4-205ENST00000417040 TLCD1Q96CP7 247 aa12.02□□□□□ -0.49
UBR4-205ENST00000417040 ATG10Q9H0Y0 220 aa12.02□□□□□ -0.49
UBR4-205ENST00000417040 UXTQ9UBK9 157 aaPredicted RBP12.02□□□□□ -0.49
UBR4-205ENST00000417040 SNX10Q9Y5X0 201 aa12.02□□□□□ -0.49
UBR4-205ENST00000417040 NFASCO94856 1347 aa12.02□□□□□ -0.49
UBR4-205ENST00000417040 A0A1W2PQ72 361 aa12.02□□□□□ -0.49
UBR4-205ENST00000417040 PGLSO95336 258 aa12.02□□□□□ -0.49
UBR4-205ENST00000417040 FABP3P05413 133 aa12.02□□□□□ -0.49
UBR4-205ENST00000417040 TCF4P15884 667 aa12.02□□□□□ -0.49
UBR4-205ENST00000417040 BCAP31P51572 246 aa12.02□□□□□ -0.49
UBR4-205ENST00000417040 GRM3Q14832 879 aa12.02□□□□□ -0.49
UBR4-205ENST00000417040 PPM1LQ5SGD2 360 aa12.02□□□□□ -0.49
UBR4-205ENST00000417040 PRAMEF19Q5SWL8 479 aa12.02□□□□□ -0.49
UBR4-205ENST00000417040 RPTNQ6XPR3 784 aa12.02□□□□□ -0.49
UBR4-205ENST00000417040 PEG10Q86TG7 708 aaKnown RBP12.02□□□□□ -0.49
UBR4-205ENST00000417040 PGAM4Q8N0Y7 254 aa12.02□□□□□ -0.49
UBR4-205ENST00000417040 DAW1Q8N136 415 aa12.02□□□□□ -0.49
UBR4-205ENST00000417040 HSPBAP1Q96EW2 488 aa12.02□□□□□ -0.49
UBR4-205ENST00000417040 AARSD1Q9BTE6 412 aaKnown RBP12.02□□□□□ -0.49
UBR4-205ENST00000417040 GLIS2Q9BZE0 524 aaPredicted RBP12.02□□□□□ -0.49
UBR4-205ENST00000417040 BRD9Q9H8M2 597 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms