RNA–Protein interactions for RNA: ENST00000414562.1

LINC00330-201, long intergenic non-protein coding RNA 330, humanhuman

TSL 2 BASIC

Gene LINC00330, Length 2,036 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00330-201ENST00000414562 HACD3Q9P035 362 aa11.28□□□□□ -0.6
LINC00330-201ENST00000414562 CA14Q9ULX7 337 aa11.28□□□□□ -0.6
LINC00330-201ENST00000414562 HS3ST2Q9Y278 367 aa11.28□□□□□ -0.6
LINC00330-201ENST00000414562 TECTAO75443 2155 aa11.27□□□□□ -0.6
LINC00330-201ENST00000414562 CCDC162PA2VCL2 907 aa11.27□□□□□ -0.61
LINC00330-201ENST00000414562 BIRC5O15392 142 aa11.27□□□□□ -0.61
LINC00330-201ENST00000414562 CD3EAPO15446 510 aaKnown RBP11.27□□□□□ -0.61
LINC00330-201ENST00000414562 PHGDHO43175 533 aaKnown RBP11.27□□□□□ -0.61
LINC00330-201ENST00000414562 BNIP3LO60238 219 aa11.27□□□□□ -0.61
LINC00330-201ENST00000414562 PLIN3O60664 434 aa11.27□□□□□ -0.61
LINC00330-201ENST00000414562 GOT2P00505 430 aaKnown RBP11.27□□□□□ -0.61
LINC00330-201ENST00000414562 BPGMP07738 259 aa11.27□□□□□ -0.61
LINC00330-201ENST00000414562 STMN1P16949 149 aa11.27□□□□□ -0.61
LINC00330-201ENST00000414562 LPOP22079 712 aaPredicted RBP11.27□□□□□ -0.61
LINC00330-201ENST00000414562 PMLP29590 882 aa11.27□□□□□ -0.61
LINC00330-201ENST00000414562 GMPRP36959 345 aa11.27□□□□□ -0.61
LINC00330-201ENST00000414562 KIR2DL1P43626 348 aaPredicted RBP11.27□□□□□ -0.61
LINC00330-201ENST00000414562 CLCN5P51795 746 aa11.27□□□□□ -0.61
LINC00330-201ENST00000414562 SNRPD1P62314 119 aaKnown RBP11.27□□□□□ -0.61
LINC00330-201ENST00000414562 ECT2LQ008S8 904 aa11.27□□□□□ -0.61
LINC00330-201ENST00000414562 ACVR1Q04771 509 aa11.27□□□□□ -0.61
LINC00330-201ENST00000414562 SULT2A1Q06520 285 aa11.27□□□□□ -0.61
LINC00330-201ENST00000414562 FZD5Q13467 585 aa11.27□□□□□ -0.61
LINC00330-201ENST00000414562 ITIH4Q14624 930 aa11.27□□□□□ -0.61
LINC00330-201ENST00000414562 PTPRRQ15256 657 aa11.27□□□□□ -0.61
LINC00330-201ENST00000414562 CCDC153Q494R4 210 aa11.27□□□□□ -0.61
LINC00330-201ENST00000414562 TMEM196Q5HYL7 178 aa11.27□□□□□ -0.61
LINC00330-201ENST00000414562 ATG16L1Q676U5 607 aa11.27□□□□□ -0.61
LINC00330-201ENST00000414562 CNSTQ6PJW8 725 aa11.27□□□□□ -0.61
LINC00330-201ENST00000414562 CAMK1DQ8IU85 385 aa11.27□□□□□ -0.61
LINC00330-201ENST00000414562 CILP2Q8IUL8 1156 aa11.27□□□□□ -0.61
LINC00330-201ENST00000414562 AHI1Q8N157 1196 aa11.27□□□□□ -0.61
LINC00330-201ENST00000414562 CHST14Q8NCH0 376 aa11.27□□□□□ -0.61
LINC00330-201ENST00000414562 ACVR1CQ8NER5 493 aa11.27□□□□□ -0.61
LINC00330-201ENST00000414562 OR4L1Q8NH43 312 aa11.27□□□□□ -0.61
LINC00330-201ENST00000414562 DNASE1L2Q92874 299 aa11.27□□□□□ -0.61
LINC00330-201ENST00000414562 TSSK1BQ9BXA7 367 aa11.27□□□□□ -0.61
LINC00330-201ENST00000414562 ATP13A3Q9H7F0 1226 aa11.27□□□□□ -0.61
LINC00330-201ENST00000414562 CATSPERZQ9NTU4 200 aa11.27□□□□□ -0.61
LINC00330-201ENST00000414562 NLE1Q9NVX2 485 aaPredicted RBP11.27□□□□□ -0.61
LINC00330-201ENST00000414562 C2orf42Q9NWW7 574 aa11.27□□□□□ -0.61
LINC00330-201ENST00000414562 MUTYHQ9UIF7 546 aa11.27□□□□□ -0.61
LINC00330-201ENST00000414562 FAM50BQ9Y247 325 aa11.27□□□□□ -0.61
LINC00330-201ENST00000414562 STARD13Q9Y3M8 1113 aa11.27□□□□□ -0.61
LINC00330-201ENST00000414562 TBC1D3BA6NDS4 549 aa11.26□□□□□ -0.61
LINC00330-201ENST00000414562 AURKAO14965 403 aa11.26□□□□□ -0.61
LINC00330-201ENST00000414562 STX7O15400 261 aaKnown RBP11.26□□□□□ -0.61
LINC00330-201ENST00000414562 CRABP2P29373 138 aa11.26□□□□□ -0.61
LINC00330-201ENST00000414562 IL12RB1P42701 662 aa11.26□□□□□ -0.61
LINC00330-201ENST00000414562 WASP42768 502 aa11.26□□□□□ -0.61
LINC00330-201ENST00000414562 LEPRP48357 1165 aaKnown RBP11.26□□□□□ -0.61
LINC00330-201ENST00000414562 CSNK1DP48730 415 aa11.26□□□□□ -0.61
LINC00330-201ENST00000414562 ZNF140P52738 457 aaPredicted RBP11.26□□□□□ -0.61
LINC00330-201ENST00000414562 SEC13P55735 322 aa11.26□□□□□ -0.61
LINC00330-201ENST00000414562 RAB10P61026 200 aa11.26□□□□□ -0.61
LINC00330-201ENST00000414562 IRF9Q00978 393 aa11.26□□□□□ -0.61
LINC00330-201ENST00000414562 POU4F1Q01851 419 aa11.26□□□□□ -0.61
LINC00330-201ENST00000414562 DMC1Q14565 340 aa11.26□□□□□ -0.61
LINC00330-201ENST00000414562 CHI3L2Q15782 390 aa11.26□□□□□ -0.61
LINC00330-201ENST00000414562 FASTKD1Q53R41 847 aaKnown RBP11.26□□□□□ -0.61
LINC00330-201ENST00000414562 TPRG1Q6ZUI0 275 aa11.26□□□□□ -0.61
LINC00330-201ENST00000414562 LDB1Q86U70 411 aaPredicted RBP11.26□□□□□ -0.61
LINC00330-201ENST00000414562 MDGA1Q8NFP4 955 aa11.26□□□□□ -0.61
LINC00330-201ENST00000414562 TSPAN17Q96FV3 270 aa11.26□□□□□ -0.61
LINC00330-201ENST00000414562 THOC1Q96FV9 657 aaKnown RBP11.26□□□□□ -0.61
LINC00330-201ENST00000414562 CDKN2AIPNLQ96HQ2 116 aa11.26□□□□□ -0.61
LINC00330-201ENST00000414562 SCYL1Q96KG9 808 aa11.26□□□□□ -0.61
LINC00330-201ENST00000414562 GPR63Q9BZJ6 419 aa11.26□□□□□ -0.61
LINC00330-201ENST00000414562 ZNF358Q9NW07 568 aa11.26□□□□□ -0.61
LINC00330-201ENST00000414562 TMEM216Q9P0N5 145 aa11.26□□□□□ -0.61
LINC00330-201ENST00000414562 MARCH4Q9P2E8 410 aaPredicted RBP11.26□□□□□ -0.61
LINC00330-201ENST00000414562 EMCNQ9ULC0 261 aa11.26□□□□□ -0.61
LINC00330-201ENST00000414562 ARL2BPQ9Y2Y0 163 aa11.26□□□□□ -0.61
LINC00330-201ENST00000414562 ACOT9Q9Y305 439 aa11.26□□□□□ -0.61
LINC00330-201ENST00000414562 CKAP5Q14008 2032 aa11.26□□□□□ -0.61
LINC00330-201ENST00000414562 CXorf51AA0A1B0GTR3 108 aa11.26□□□□□ -0.61
LINC00330-201ENST00000414562 PGLSO95336 258 aa11.26□□□□□ -0.61
LINC00330-201ENST00000414562 PIGNO95427 931 aa11.26□□□□□ -0.61
LINC00330-201ENST00000414562 PROCP04070 461 aa11.26□□□□□ -0.61
LINC00330-201ENST00000414562 DLDP09622 509 aaKnown RBP11.26□□□□□ -0.61
LINC00330-201ENST00000414562 TROVE2P10155 538 aaKnown RBP eCLIP11.26□□□□□ -0.61
LINC00330-201ENST00000414562 HNRNPLP14866 589 aaKnown RBP eCLIP11.26□□□□□ -0.61
LINC00330-201ENST00000414562 CTPS1P17812 591 aa11.26□□□□□ -0.61
LINC00330-201ENST00000414562 POLR2EP19388 210 aaKnown RBP11.26□□□□□ -0.61
LINC00330-201ENST00000414562 SERPINA4P29622 427 aa11.26□□□□□ -0.61
LINC00330-201ENST00000414562 EIF2DP41214 584 aaKnown RBP11.26□□□□□ -0.61
LINC00330-201ENST00000414562 GRIA2P42262 883 aa11.26□□□□□ -0.61
LINC00330-201ENST00000414562 GRIA4P48058 902 aa11.26□□□□□ -0.61
LINC00330-201ENST00000414562 METAP1P53582 386 aa11.26□□□□□ -0.61
LINC00330-201ENST00000414562 ZNF234Q14588 700 aa11.26□□□□□ -0.61
LINC00330-201ENST00000414562 ZNF789Q5FWF6 425 aa11.26□□□□□ -0.61
LINC00330-201ENST00000414562 AP1ARQ63HQ0 302 aa11.26□□□□□ -0.61
LINC00330-201ENST00000414562 C22orf39Q6P5X5 142 aa11.26□□□□□ -0.61
LINC00330-201ENST00000414562 AFTPHQ6ULP2 937 aa11.26□□□□□ -0.61
LINC00330-201ENST00000414562 CCDC121Q6ZUS5 278 aa11.26□□□□□ -0.61
LINC00330-201ENST00000414562 Q6ZVU0 165 aa11.26□□□□□ -0.61
LINC00330-201ENST00000414562 OTOAQ7RTW8 1153 aa11.26□□□□□ -0.61
LINC00330-201ENST00000414562 GALNT7Q86SF2 657 aa11.26□□□□□ -0.61
LINC00330-201ENST00000414562 RALGPS2Q86X27 583 aaPredicted RBP11.26□□□□□ -0.61
LINC00330-201ENST00000414562 PLD6Q8N2A8 252 aaKnown RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms