RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 TRA2BP62995 288 aaKnown RBP9.41□□□□□ -0.9
SNHG3-201ENST00000413987 TFAMQ00059 246 aaKnown RBP9.41□□□□□ -0.9
SNHG3-201ENST00000413987 EPS8Q12929 822 aa9.41□□□□□ -0.9
SNHG3-201ENST00000413987 TBCCQ15814 346 aa9.41□□□□□ -0.9
SNHG3-201ENST00000413987 FAM187BQ17R55 369 aa9.41□□□□□ -0.9
SNHG3-201ENST00000413987 ARHGAP44Q17R89 818 aa9.41□□□□□ -0.9
SNHG3-201ENST00000413987 UAP1L1Q3KQV9 507 aa9.41□□□□□ -0.9
SNHG3-201ENST00000413987 PEAR1Q5VY43 1037 aaPredicted RBP9.41□□□□□ -0.9
SNHG3-201ENST00000413987 TRAT1Q6PIZ9 186 aa9.41□□□□□ -0.9
SNHG3-201ENST00000413987 CENPUQ71F23 418 aa9.41□□□□□ -0.9
SNHG3-201ENST00000413987 PALB2Q86YC2 1186 aa9.41□□□□□ -0.9
SNHG3-201ENST00000413987 PDSS2Q86YH6 399 aa9.41□□□□□ -0.9
SNHG3-201ENST00000413987 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.41□□□□□ -0.9
SNHG3-201ENST00000413987 C4orf33Q8N1A6 199 aa9.41□□□□□ -0.9
SNHG3-201ENST00000413987 FBXW8Q8N3Y1 598 aa9.41□□□□□ -0.9
SNHG3-201ENST00000413987 OR6Y1Q8NGX8 325 aa9.41□□□□□ -0.9
SNHG3-201ENST00000413987 SGF29Q96ES7 293 aa9.41□□□□□ -0.9
SNHG3-201ENST00000413987 NUP85Q9BW27 656 aa9.41□□□□□ -0.9
SNHG3-201ENST00000413987 TSSK1BQ9BXA7 367 aa9.41□□□□□ -0.9
SNHG3-201ENST00000413987 CHST7Q9NS84 486 aa9.41□□□□□ -0.9
SNHG3-201ENST00000413987 KANSL3Q9P2N6 904 aa9.41□□□□□ -0.9
SNHG3-201ENST00000413987 FNDC3AQ9Y2H6 1198 aaKnown RBP9.41□□□□□ -0.9
SNHG3-201ENST00000413987 SH3GLB1Q9Y371 365 aa9.41□□□□□ -0.9
SNHG3-201ENST00000413987 PCDHA11Q9Y5I1 949 aa9.41□□□□□ -0.9
SNHG3-201ENST00000413987 CLDN16Q9Y5I7 305 aa9.41□□□□□ -0.9
SNHG3-201ENST00000413987 A0A0J9YVX5 310 aa9.4□□□□□ -0.9
SNHG3-201ENST00000413987 A4D1N5 150 aa9.4□□□□□ -0.9
SNHG3-201ENST00000413987 GOLGA8CPA6NN73 597 aa9.4□□□□□ -0.9
SNHG3-201ENST00000413987 A8MXE2 369 aa9.4□□□□□ -0.9
SNHG3-201ENST00000413987 PTGES3LE9PB15 166 aa9.4□□□□□ -0.9
SNHG3-201ENST00000413987 VNN1O95497 513 aa9.4□□□□□ -0.9
SNHG3-201ENST00000413987 CST3P01034 146 aaPredicted RBP9.4□□□□□ -0.9
SNHG3-201ENST00000413987 AMPD1P23109 780 aa9.4□□□□□ -0.9
SNHG3-201ENST00000413987 RPL5P46777 297 aaKnown RBP9.4□□□□□ -0.9
SNHG3-201ENST00000413987 SERPINB8P50452 374 aa9.4□□□□□ -0.9
SNHG3-201ENST00000413987 AFF1P51825 1210 aaKnown RBP9.4□□□□□ -0.9
SNHG3-201ENST00000413987 CRYBB1P53674 252 aaPredicted RBP9.4□□□□□ -0.9
SNHG3-201ENST00000413987 PLD1Q13393 1074 aa9.4□□□□□ -0.9
SNHG3-201ENST00000413987 PUM1Q14671 1186 aaKnown RBP eCLIP9.4□□□□□ -0.9
SNHG3-201ENST00000413987 EPC2Q52LR7 807 aa9.4□□□□□ -0.9
SNHG3-201ENST00000413987 CES4AQ5XG92 561 aa9.4□□□□□ -0.9
SNHG3-201ENST00000413987 PET117Q6UWS5 81 aa9.4□□□□□ -0.9
SNHG3-201ENST00000413987 KYAT3Q6YP21 454 aaKnown RBP9.4□□□□□ -0.9
SNHG3-201ENST00000413987 RIPOR1Q6ZS17 1223 aa9.4□□□□□ -0.9
SNHG3-201ENST00000413987 TMEM145Q8NBT3 493 aa9.4□□□□□ -0.9
SNHG3-201ENST00000413987 ART5Q96L15 291 aa9.4□□□□□ -0.9
SNHG3-201ENST00000413987 CDK5RAP1Q96SZ6 601 aaKnown RBP9.4□□□□□ -0.9
SNHG3-201ENST00000413987 ZCCHC2Q9C0B9 1178 aaKnown RBP9.4□□□□□ -0.9
SNHG3-201ENST00000413987 PCDH18Q9HCL0 1135 aa9.4□□□□□ -0.9
SNHG3-201ENST00000413987 THEGQ9P2T0 379 aa9.4□□□□□ -0.9
SNHG3-201ENST00000413987 ST3GAL5Q9UNP4 418 aa9.4□□□□□ -0.9
SNHG3-201ENST00000413987 NEU2Q9Y3R4 380 aa9.4□□□□□ -0.9
SNHG3-201ENST00000413987 TRIP11Q15643 1979 aa9.4□□□□□ -0.9
SNHG3-201ENST00000413987 ANK1P16157 1881 aa9.4□□□□□ -0.9
SNHG3-201ENST00000413987 LOC100653049A0A140TA62 436 aa9.4□□□□□ -0.91
SNHG3-201ENST00000413987 TMEM221A6NGB7 291 aa9.4□□□□□ -0.91
SNHG3-201ENST00000413987 SPECC1L-ADORA2AF8WAN1 911 aa9.4□□□□□ -0.91
SNHG3-201ENST00000413987 TBX1O43435 398 aa9.4□□□□□ -0.91
SNHG3-201ENST00000413987 KRT34O76011 436 aa9.4□□□□□ -0.91
SNHG3-201ENST00000413987 ZFXP17010 805 aaPredicted RBP9.4□□□□□ -0.91
SNHG3-201ENST00000413987 TYMPP19971 482 aa9.4□□□□□ -0.91
SNHG3-201ENST00000413987 STAT5AP42229 794 aa9.4□□□□□ -0.91
SNHG3-201ENST00000413987 SCNN1GP51170 649 aa9.4□□□□□ -0.91
SNHG3-201ENST00000413987 CHN2P52757 468 aa9.4□□□□□ -0.91
SNHG3-201ENST00000413987 ARPC4P59998 168 aa9.4□□□□□ -0.91
SNHG3-201ENST00000413987 PPIDQ08752 370 aaKnown RBP9.4□□□□□ -0.91
SNHG3-201ENST00000413987 MGAT3Q09327 533 aa9.4□□□□□ -0.91
SNHG3-201ENST00000413987 DCTN2Q13561 401 aaKnown RBP9.4□□□□□ -0.91
SNHG3-201ENST00000413987 TRIM25Q14258 630 aaKnown RBP9.4□□□□□ -0.91
SNHG3-201ENST00000413987 SQLEQ14534 574 aa9.4□□□□□ -0.91
SNHG3-201ENST00000413987 TRIP13Q15645 432 aaPredicted RBP9.4□□□□□ -0.91
SNHG3-201ENST00000413987 ADRM1Q16186 407 aa9.4□□□□□ -0.91
SNHG3-201ENST00000413987 TRIM71Q2Q1W2 868 aaKnown RBP9.4□□□□□ -0.91
SNHG3-201ENST00000413987 SLC39A12Q504Y0 691 aa9.4□□□□□ -0.91
SNHG3-201ENST00000413987 SHEQ5VZ18 495 aa9.4□□□□□ -0.91
SNHG3-201ENST00000413987 KRT39Q6A163 491 aa9.4□□□□□ -0.91
SNHG3-201ENST00000413987 TWF2Q6IBS0 349 aaKnown RBP9.4□□□□□ -0.91
SNHG3-201ENST00000413987 JADE1Q6IE81 842 aa9.4□□□□□ -0.91
SNHG3-201ENST00000413987 CTU1Q7Z7A3 348 aaKnown RBP9.4□□□□□ -0.91
SNHG3-201ENST00000413987 HID1Q8IV36 788 aa9.4□□□□□ -0.91
SNHG3-201ENST00000413987 MAP7D3Q8IWC1 876 aa9.4□□□□□ -0.91
SNHG3-201ENST00000413987 FIBINQ8TAL6 211 aa9.4□□□□□ -0.91
SNHG3-201ENST00000413987 LPPQ93052 612 aa9.4□□□□□ -0.91
SNHG3-201ENST00000413987 NMD3Q96D46 503 aaKnown RBP9.4□□□□□ -0.91
SNHG3-201ENST00000413987 SIPA1Q96FS4 1042 aa9.4□□□□□ -0.91
SNHG3-201ENST00000413987 OXNAD1Q96HP4 312 aaPredicted RBP9.4□□□□□ -0.91
SNHG3-201ENST00000413987 CGRRF1Q99675 332 aa9.4□□□□□ -0.91
SNHG3-201ENST00000413987 HEPHQ9BQS7 1158 aa9.4□□□□□ -0.91
SNHG3-201ENST00000413987 KLHL4Q9C0H6 718 aa9.4□□□□□ -0.91
SNHG3-201ENST00000413987 EBF3Q9H4W6 596 aa9.4□□□□□ -0.91
SNHG3-201ENST00000413987 SAYSD1Q9NPB0 183 aa9.4□□□□□ -0.91
SNHG3-201ENST00000413987 UBE2TQ9NPD8 197 aaPredicted RBP9.4□□□□□ -0.91
SNHG3-201ENST00000413987 H2AFY2Q9P0M6 372 aaPredicted RBP9.4□□□□□ -0.91
SNHG3-201ENST00000413987 ATPIF1Q9UII2 106 aa9.4□□□□□ -0.91
SNHG3-201ENST00000413987 PCDHA9Q9Y5H5 950 aa9.4□□□□□ -0.91
SNHG3-201ENST00000413987 TRPV2Q9Y5S1 764 aa9.4□□□□□ -0.91
SNHG3-201ENST00000413987 hCG_1809904A0A1W2PP81 198 aa9.39□□□□□ -0.91
SNHG3-201ENST00000413987 A0A1W2PPE2 198 aa9.39□□□□□ -0.91
SNHG3-201ENST00000413987 A0A1W2PR64 198 aa9.39□□□□□ -0.91
SNHG3-201ENST00000413987 M0QZ92 97 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms