RNA–Protein interactions for RNA: ENST00000413806.7

SMARCA4-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5 BASIC

Gene SMARCA4, Length 5,512 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-202ENST00000413806 TM7SF2O76062 418 aa13.72□□□□□ -0.21
SMARCA4-202ENST00000413806 KLF10Q13118 480 aa13.72□□□□□ -0.21
SMARCA4-202ENST00000413806 SLC1A5Q15758 541 aa13.72□□□□□ -0.21
SMARCA4-202ENST00000413806 USP41Q3LFD5 358 aa13.72□□□□□ -0.21
SMARCA4-202ENST00000413806 DUSP28Q4G0W2 176 aa13.72□□□□□ -0.21
SMARCA4-202ENST00000413806 ANXA8L1Q5VT79 327 aa13.72□□□□□ -0.21
SMARCA4-202ENST00000413806 R3HCC1LQ7Z5L2 792 aaKnown RBP13.72□□□□□ -0.21
SMARCA4-202ENST00000413806 PQLC1Q8N2U9 271 aa13.72□□□□□ -0.21
SMARCA4-202ENST00000413806 ZNF655Q8N720 491 aaPredicted RBP13.72□□□□□ -0.21
SMARCA4-202ENST00000413806 CXorf40AQ8TE69 158 aa13.72□□□□□ -0.21
SMARCA4-202ENST00000413806 LPPQ93052 612 aa13.72□□□□□ -0.21
SMARCA4-202ENST00000413806 TUBGCP5Q96RT8 1024 aa13.72□□□□□ -0.21
SMARCA4-202ENST00000413806 RHOBTB2Q9BYZ6 727 aa13.72□□□□□ -0.21
SMARCA4-202ENST00000413806 HSD3B7Q9H2F3 369 aa13.72□□□□□ -0.21
SMARCA4-202ENST00000413806 CCNB1IP1Q9NPC3 277 aa13.72□□□□□ -0.21
SMARCA4-202ENST00000413806 SALL4Q9UJQ4 1053 aa13.72□□□□□ -0.21
SMARCA4-202ENST00000413806 SPEF2Q9C093 1822 aa13.72□□□□□ -0.21
SMARCA4-202ENST00000413806 TCRBV7S2A1N4TA0A589 114 aa13.72□□□□□ -0.21
SMARCA4-202ENST00000413806 LOC110117498-PIK3R3F6TDL0 507 aa13.72□□□□□ -0.21
SMARCA4-202ENST00000413806 RPP40O75818 363 aaKnown RBP13.72□□□□□ -0.21
SMARCA4-202ENST00000413806 TNNI3P19429 210 aa13.72□□□□□ -0.21
SMARCA4-202ENST00000413806 PDCD4Q53EL6 469 aaKnown RBP13.72□□□□□ -0.21
SMARCA4-202ENST00000413806 CERCAMQ5T4B2 595 aa13.72□□□□□ -0.21
SMARCA4-202ENST00000413806 ECHDC2Q86YB7 292 aa13.72□□□□□ -0.21
SMARCA4-202ENST00000413806 OFCC1Q8IZS5 231 aa13.72□□□□□ -0.21
SMARCA4-202ENST00000413806 EFCAB3Q8N7B9 438 aa13.72□□□□□ -0.21
SMARCA4-202ENST00000413806 MCFD2Q8NI22 146 aa13.72□□□□□ -0.21
SMARCA4-202ENST00000413806 SUSD6Q92537 303 aa13.72□□□□□ -0.21
SMARCA4-202ENST00000413806 NACC2Q96BF6 587 aa13.72□□□□□ -0.21
SMARCA4-202ENST00000413806 CAB39LQ9H9S4 337 aa13.72□□□□□ -0.21
SMARCA4-202ENST00000413806 A8MX80 341 aa13.72□□□□□ -0.21
SMARCA4-202ENST00000413806 MFSD11O43934 449 aa13.72□□□□□ -0.21
SMARCA4-202ENST00000413806 CST1P01037 141 aa13.72□□□□□ -0.21
SMARCA4-202ENST00000413806 LINC00032P0C843 101 aa13.72□□□□□ -0.21
SMARCA4-202ENST00000413806 GTF2E2P29084 291 aaKnown RBP13.72□□□□□ -0.21
SMARCA4-202ENST00000413806 GALNT3Q14435 633 aa13.72□□□□□ -0.21
SMARCA4-202ENST00000413806 ZDHHC20Q5W0Z9 365 aa13.72□□□□□ -0.21
SMARCA4-202ENST00000413806 BHLHB9Q6PI77 547 aa13.72□□□□□ -0.21
SMARCA4-202ENST00000413806 DOK6Q6PKX4 331 aa13.72□□□□□ -0.21
SMARCA4-202ENST00000413806 ZYG11AQ6WRX3 759 aa13.72□□□□□ -0.21
SMARCA4-202ENST00000413806 AMIGO2Q86SJ2 522 aa13.72□□□□□ -0.21
SMARCA4-202ENST00000413806 OR52K2Q8NGK3 314 aa13.72□□□□□ -0.21
SMARCA4-202ENST00000413806 NXF3Q9H4D5 531 aaKnown RBP13.72□□□□□ -0.21
SMARCA4-202ENST00000413806 BPIFA1Q9NP55 256 aa13.72□□□□□ -0.21
SMARCA4-202ENST00000413806 PSME2Q9UL46 239 aa13.72□□□□□ -0.21
SMARCA4-202ENST00000413806 STX11O75558 287 aa13.72□□□□□ -0.21
SMARCA4-202ENST00000413806 PIAS1O75925 651 aa13.72□□□□□ -0.21
SMARCA4-202ENST00000413806 AP2A1O95782 977 aa13.72□□□□□ -0.21
SMARCA4-202ENST00000413806 C2P06681 752 aa13.72□□□□□ -0.21
SMARCA4-202ENST00000413806 MMP3P08254 477 aa13.72□□□□□ -0.21
SMARCA4-202ENST00000413806 MAGP20916 626 aa13.72□□□□□ -0.21
SMARCA4-202ENST00000413806 MC4RP32245 332 aa13.72□□□□□ -0.21
SMARCA4-202ENST00000413806 CYP1B1Q16678 543 aa13.72□□□□□ -0.21
SMARCA4-202ENST00000413806 SPESP1Q6UW49 350 aa13.72□□□□□ -0.21
SMARCA4-202ENST00000413806 GPR180Q86V85 440 aa13.72□□□□□ -0.21
SMARCA4-202ENST00000413806 TBC1D21Q8IYX1 336 aa13.72□□□□□ -0.21
SMARCA4-202ENST00000413806 GALNT6Q8NCL4 622 aa13.72□□□□□ -0.21
SMARCA4-202ENST00000413806 LRRN4Q8WUT4 740 aa13.72□□□□□ -0.21
SMARCA4-202ENST00000413806 HEXDCQ8WVB3 486 aa13.72□□□□□ -0.21
SMARCA4-202ENST00000413806 PDZD7Q9H5P4 517 aa13.72□□□□□ -0.21
SMARCA4-202ENST00000413806 SLIT2O94813 1529 aa13.72□□□□□ -0.21
SMARCA4-202ENST00000413806 FAM92AA1XBS5 289 aa13.71□□□□□ -0.21
SMARCA4-202ENST00000413806 FFAR3O14843 346 aa13.71□□□□□ -0.21
SMARCA4-202ENST00000413806 GPR42O15529 346 aa13.71□□□□□ -0.21
SMARCA4-202ENST00000413806 NRP2O60462 931 aa13.71□□□□□ -0.21
SMARCA4-202ENST00000413806 PARP8Q8N3A8 854 aa13.71□□□□□ -0.21
SMARCA4-202ENST00000413806 TAMM41Q96BW9 452 aa13.71□□□□□ -0.21
SMARCA4-202ENST00000413806 REXO5Q96IC2 774 aaKnown RBP13.71□□□□□ -0.21
SMARCA4-202ENST00000413806 PACSIN3Q9UKS6 424 aa13.71□□□□□ -0.21
SMARCA4-202ENST00000413806 IKZF3Q9UKT9 509 aa13.71□□□□□ -0.21
SMARCA4-202ENST00000413806 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.71□□□□□ -0.21
SMARCA4-202ENST00000413806 SLURP2P0DP57 97 aa13.71□□□□□ -0.21
SMARCA4-202ENST00000413806 HDCP19113 662 aa13.71□□□□□ -0.21
SMARCA4-202ENST00000413806 MAXP61244 160 aa13.71□□□□□ -0.21
SMARCA4-202ENST00000413806 PFKPQ01813 784 aa13.71□□□□□ -0.21
SMARCA4-202ENST00000413806 TUSC3Q13454 348 aa13.71□□□□□ -0.21
SMARCA4-202ENST00000413806 TREML2Q5T2D2 321 aa13.71□□□□□ -0.21
SMARCA4-202ENST00000413806 C6orf183Q5T699 404 aa13.71□□□□□ -0.21
SMARCA4-202ENST00000413806 SATL1Q86VE3 508 aa13.71□□□□□ -0.21
SMARCA4-202ENST00000413806 BTN2A3PQ96KV6 586 aa13.71□□□□□ -0.21
SMARCA4-202ENST00000413806 RAB26Q9ULW5 256 aa13.71□□□□□ -0.21
SMARCA4-202ENST00000413806 CYP7B1O75881 506 aa13.71□□□□□ -0.21
SMARCA4-202ENST00000413806 CHRNB2P17787 502 aa13.71□□□□□ -0.21
SMARCA4-202ENST00000413806 CCNCP24863 283 aa13.71□□□□□ -0.21
SMARCA4-202ENST00000413806 PSMD4P55036 377 aaKnown RBP13.71□□□□□ -0.21
SMARCA4-202ENST00000413806 FKBP1BP68106 108 aa13.71□□□□□ -0.21
SMARCA4-202ENST00000413806 GSTCDQ8NEC7 633 aa13.71□□□□□ -0.21
SMARCA4-202ENST00000413806 ZNF671Q8TAW3 534 aa13.71□□□□□ -0.21
SMARCA4-202ENST00000413806 CMTM6Q9NX76 183 aa13.71□□□□□ -0.21
SMARCA4-202ENST00000413806 MLXQ9UH92 298 aa13.71□□□□□ -0.21
SMARCA4-202ENST00000413806 SMIM28A0A1B0GU29 152 aa13.71□□□□□ -0.22
SMARCA4-202ENST00000413806 IPO13O94829 963 aaKnown RBP13.71□□□□□ -0.22
SMARCA4-202ENST00000413806 ZBTB11O95625 1053 aaPredicted RBP13.71□□□□□ -0.22
SMARCA4-202ENST00000413806 CD52P31358 61 aa13.71□□□□□ -0.22
SMARCA4-202ENST00000413806 HECTD2Q5U5R9 776 aa13.71□□□□□ -0.22
SMARCA4-202ENST00000413806 SPATA6LQ8N4H0 392 aa13.71□□□□□ -0.22
SMARCA4-202ENST00000413806 RASSF5Q8WWW0 418 aa13.71□□□□□ -0.22
SMARCA4-202ENST00000413806 SLC47A1Q96FL8 570 aa13.71□□□□□ -0.22
SMARCA4-202ENST00000413806 FMN2Q9NZ56 1722 aa13.71□□□□□ -0.22
SMARCA4-202ENST00000413806 H3BNX3 289 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms