RNA–Protein interactions for RNA: ENST00000413296.1

CBX1P3-201, Transcript of chromobox 1 pseudogene 3, humanhuman

BASIC

Gene CBX1P3, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P3-201ENST00000413296 CFAP61Q8NHU2 1237 aa5.88□□□□□ -1.47
CBX1P3-201ENST00000413296 HUS1BQ8NHY5 278 aa5.88□□□□□ -1.47
CBX1P3-201ENST00000413296 ZNF417Q8TAU3 575 aa5.88□□□□□ -1.47
CBX1P3-201ENST00000413296 DNAJB14Q8TBM8 379 aa5.88□□□□□ -1.47
CBX1P3-201ENST00000413296 RNASE8Q8TDE3 154 aaKnown RBP5.88□□□□□ -1.47
CBX1P3-201ENST00000413296 ROBO4Q8WZ75 1007 aa5.88□□□□□ -1.47
CBX1P3-201ENST00000413296 SLC46A1Q96NT5 459 aa5.88□□□□□ -1.47
CBX1P3-201ENST00000413296 NECTIN4Q96NY8 510 aa5.88□□□□□ -1.47
CBX1P3-201ENST00000413296 PSKH2Q96QS6 385 aa5.88□□□□□ -1.47
CBX1P3-201ENST00000413296 ZNF587Q96SQ5 575 aaPredicted RBP5.88□□□□□ -1.47
CBX1P3-201ENST00000413296 CDRT15Q96T59 188 aa5.88□□□□□ -1.47
CBX1P3-201ENST00000413296 MPHOSPH9Q99550 1183 aa5.88□□□□□ -1.47
CBX1P3-201ENST00000413296 TTYH3Q9C0H2 523 aa5.88□□□□□ -1.47
CBX1P3-201ENST00000413296 NUAK2Q9H093 628 aa5.88□□□□□ -1.47
CBX1P3-201ENST00000413296 EPC1Q9H2F5 836 aa5.88□□□□□ -1.47
CBX1P3-201ENST00000413296 CNOT10Q9H9A5 744 aaKnown RBP5.88□□□□□ -1.47
CBX1P3-201ENST00000413296 RPF1Q9H9Y2 349 aaKnown RBP5.88□□□□□ -1.47
CBX1P3-201ENST00000413296 FBXO28Q9NVF7 368 aa5.88□□□□□ -1.47
CBX1P3-201ENST00000413296 TBC1D13Q9NVG8 400 aa5.88□□□□□ -1.47
CBX1P3-201ENST00000413296 IL20Q9NYY1 176 aa5.88□□□□□ -1.47
CBX1P3-201ENST00000413296 FBXW11Q9UKB1 542 aa5.88□□□□□ -1.47
CBX1P3-201ENST00000413296 SLC12A4Q9UP95 1085 aa5.88□□□□□ -1.47
CBX1P3-201ENST00000413296 MAB21L2Q9Y586 359 aa5.88□□□□□ -1.47
CBX1P3-201ENST00000413296 ZMYM3Q14202 1370 aa5.88□□□□□ -1.47
CBX1P3-201ENST00000413296 FRMPD1Q5SYB0 1578 aa5.88□□□□□ -1.47
CBX1P3-201ENST00000413296 C13orf42A0A1B0GVH6 325 aa5.87□□□□□ -1.47
CBX1P3-201ENST00000413296 A0A1W2PQ27 194 aa5.87□□□□□ -1.47
CBX1P3-201ENST00000413296 A0A1W2PQ64 194 aa5.87□□□□□ -1.47
CBX1P3-201ENST00000413296 A0A1W2PQC6 194 aa5.87□□□□□ -1.47
CBX1P3-201ENST00000413296 A0A1W2PQD8 194 aa5.87□□□□□ -1.47
CBX1P3-201ENST00000413296 NPIPB13A6NJU9 1138 aa5.87□□□□□ -1.47
CBX1P3-201ENST00000413296 SDR42E2A6NKP2 422 aa5.87□□□□□ -1.47
CBX1P3-201ENST00000413296 ZNF716A6NP11 495 aa5.87□□□□□ -1.47
CBX1P3-201ENST00000413296 ZNF839A8K0R7 811 aa5.87□□□□□ -1.47
CBX1P3-201ENST00000413296 NPIPB4C9JG80 1138 aa5.87□□□□□ -1.47
CBX1P3-201ENST00000413296 DNALI1O14645 258 aaPredicted RBP5.87□□□□□ -1.47
CBX1P3-201ENST00000413296 PLRG1O43660 514 aaKnown RBP5.87□□□□□ -1.47
CBX1P3-201ENST00000413296 HSF2BPO75031 334 aa5.87□□□□□ -1.47
CBX1P3-201ENST00000413296 CBFA2T3O75081 653 aa5.87□□□□□ -1.47
CBX1P3-201ENST00000413296 KRT14P02533 472 aa5.87□□□□□ -1.47
CBX1P3-201ENST00000413296 ENO2P09104 434 aaPredicted RBP5.87□□□□□ -1.47
CBX1P3-201ENST00000413296 OR52Z1P0C646 297 aa5.87□□□□□ -1.47
CBX1P3-201ENST00000413296 ZNF735P0CB33 412 aa5.87□□□□□ -1.47
CBX1P3-201ENST00000413296 ZNF853P0CG23 659 aa5.87□□□□□ -1.47
CBX1P3-201ENST00000413296 PKMP14618 531 aaKnown RBP5.87□□□□□ -1.47
CBX1P3-201ENST00000413296 PNLIPP16233 465 aa5.87□□□□□ -1.47
CBX1P3-201ENST00000413296 RBL1P28749 1068 aa5.87□□□□□ -1.47
CBX1P3-201ENST00000413296 CDC25CP30307 473 aa5.87□□□□□ -1.47
CBX1P3-201ENST00000413296 SERPINB6P35237 376 aa5.87□□□□□ -1.47
CBX1P3-201ENST00000413296 SLC16A2P36021 539 aa5.87□□□□□ -1.47
CBX1P3-201ENST00000413296 MTNR1AP48039 350 aa5.87□□□□□ -1.47
CBX1P3-201ENST00000413296 SCNN1GP51170 649 aa5.87□□□□□ -1.47
CBX1P3-201ENST00000413296 MTTPP55157 894 aa5.87□□□□□ -1.47
CBX1P3-201ENST00000413296 OXCT1P55809 520 aa5.87□□□□□ -1.47
CBX1P3-201ENST00000413296 ACSM2AQ08AH3 577 aa5.87□□□□□ -1.47
CBX1P3-201ENST00000413296 HSPA14Q0VDF9 509 aa5.87□□□□□ -1.47
CBX1P3-201ENST00000413296 LCP2Q13094 533 aa5.87□□□□□ -1.47
CBX1P3-201ENST00000413296 CUL1Q13616 776 aa5.87□□□□□ -1.47
CBX1P3-201ENST00000413296 PTCHD3Q3KNS1 767 aa5.87□□□□□ -1.47
CBX1P3-201ENST00000413296 CBWD6Q4V339 395 aa5.87□□□□□ -1.47
CBX1P3-201ENST00000413296 CBWD3Q5JTY5 395 aa5.87□□□□□ -1.47
CBX1P3-201ENST00000413296 ACSM2BQ68CK6 577 aa5.87□□□□□ -1.47
CBX1P3-201ENST00000413296 SULT1C3Q6IMI6 304 aa5.87□□□□□ -1.47
CBX1P3-201ENST00000413296 BRAT1Q6PJG6 821 aa5.87□□□□□ -1.47
CBX1P3-201ENST00000413296 TAOK1Q7L7X3 1001 aa5.87□□□□□ -1.47
CBX1P3-201ENST00000413296 ZC3H18Q86VM9 953 aaKnown RBP5.87□□□□□ -1.47
CBX1P3-201ENST00000413296 ARFGAP2Q8N6H7 521 aa5.87□□□□□ -1.47
CBX1P3-201ENST00000413296 BHLHE23Q8NDY6 225 aa5.87□□□□□ -1.47
CBX1P3-201ENST00000413296 NCOA7Q8NI08 942 aa5.87□□□□□ -1.47
CBX1P3-201ENST00000413296 OCC1Q8TAD7 63 aa5.87□□□□□ -1.47
CBX1P3-201ENST00000413296 SELENOMQ8WWX9 145 aa5.87□□□□□ -1.47
CBX1P3-201ENST00000413296 ASB11Q8WXH4 323 aa5.87□□□□□ -1.47
CBX1P3-201ENST00000413296 RNF31Q96EP0 1072 aa5.87□□□□□ -1.47
CBX1P3-201ENST00000413296 FAR2Q96K12 515 aa5.87□□□□□ -1.47
CBX1P3-201ENST00000413296 COQ10AQ96MF6 247 aa5.87□□□□□ -1.47
CBX1P3-201ENST00000413296 PWWP2AQ96N64 755 aa5.87□□□□□ -1.47
CBX1P3-201ENST00000413296 SH3GL1Q99961 368 aa5.87□□□□□ -1.47
CBX1P3-201ENST00000413296 ZNF416Q9BWM5 594 aa5.87□□□□□ -1.47
CBX1P3-201ENST00000413296 NPLQ9BXD5 320 aaPredicted RBP5.87□□□□□ -1.47
CBX1P3-201ENST00000413296 C1QTNF1Q9BXJ1 281 aa5.87□□□□□ -1.47
CBX1P3-201ENST00000413296 VCX2Q9H322 139 aa5.87□□□□□ -1.47
CBX1P3-201ENST00000413296 PDZD7Q9H5P4 517 aa5.87□□□□□ -1.47
CBX1P3-201ENST00000413296 RNPEPL1Q9HAU8 725 aa5.87□□□□□ -1.47
CBX1P3-201ENST00000413296 FARSBQ9NSD9 589 aaKnown RBP5.87□□□□□ -1.47
CBX1P3-201ENST00000413296 SAE1Q9UBE0 346 aaPredicted RBP5.87□□□□□ -1.47
CBX1P3-201ENST00000413296 SLC23A1Q9UHI7 598 aa5.87□□□□□ -1.47
CBX1P3-201ENST00000413296 TSPAN16Q9UKR8 245 aa5.87□□□□□ -1.47
CBX1P3-201ENST00000413296 A4GNTQ9UNA3 340 aa5.87□□□□□ -1.47
CBX1P3-201ENST00000413296 SNX7Q9UNH6 387 aa5.87□□□□□ -1.47
CBX1P3-201ENST00000413296 EXO1Q9UQ84 846 aaKnown RBP5.87□□□□□ -1.47
CBX1P3-201ENST00000413296 C15orf41Q9Y2V0 281 aa5.87□□□□□ -1.47
CBX1P3-201ENST00000413296 SIT1Q9Y3P8 196 aa5.87□□□□□ -1.47
CBX1P3-201ENST00000413296 CMAHPQ9Y471 501 aa5.87□□□□□ -1.47
CBX1P3-201ENST00000413296 UBE4BO95155 1302 aa5.87□□□□□ -1.47
CBX1P3-201ENST00000413296 ZNF518AQ6AHZ1 1483 aa5.87□□□□□ -1.47
CBX1P3-201ENST00000413296 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.87□□□□□ -1.47
CBX1P3-201ENST00000413296 RIMS1Q86UR5 1692 aaKnown RBP5.87□□□□□ -1.47
CBX1P3-201ENST00000413296 RAPGEF6Q8TEU7 1601 aa5.86□□□□□ -1.47
CBX1P3-201ENST00000413296 TTC37Q6PGP7 1564 aa5.86□□□□□ -1.47
CBX1P3-201ENST00000413296 NPATQ14207 1427 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms