RNA–Protein interactions for RNA: ENST00000411690.2

LINC00396-201, long intergenic non-protein coding RNA 396, humanhuman

TSL 3 BASIC

Gene LINC00396, Length 439 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00396-201ENST00000411690 SPON2Q9BUD6 331 aa6.34□□□□□ -1.39
LINC00396-201ENST00000411690 TRIM62Q9BVG3 475 aa6.34□□□□□ -1.39
LINC00396-201ENST00000411690 NUDT9Q9BW91 350 aa6.34□□□□□ -1.39
LINC00396-201ENST00000411690 OSBPL1AQ9BXW6 950 aa6.34□□□□□ -1.39
LINC00396-201ENST00000411690 GSDMCQ9BYG8 508 aa6.34□□□□□ -1.39
LINC00396-201ENST00000411690 SIK2Q9H0K1 926 aa6.34□□□□□ -1.39
LINC00396-201ENST00000411690 ACTL8Q9H568 366 aa6.34□□□□□ -1.39
LINC00396-201ENST00000411690 KBTBD4Q9NVX7 518 aa6.34□□□□□ -1.39
LINC00396-201ENST00000411690 FAM13BQ9NYF5 915 aa6.34□□□□□ -1.39
LINC00396-201ENST00000411690 COX16Q9P0S2 106 aa6.34□□□□□ -1.39
LINC00396-201ENST00000411690 TAAR2Q9P1P5 351 aa6.34□□□□□ -1.39
LINC00396-201ENST00000411690 TMEM63CQ9P1W3 806 aa6.34□□□□□ -1.39
LINC00396-201ENST00000411690 PADI1Q9ULC6 663 aa6.34□□□□□ -1.39
LINC00396-201ENST00000411690 KIAA1257Q9ULG3 409 aa6.34□□□□□ -1.39
LINC00396-201ENST00000411690 B3GNT3Q9Y2A9 372 aa6.34□□□□□ -1.39
LINC00396-201ENST00000411690 HS3ST4Q9Y661 456 aa6.34□□□□□ -1.39
LINC00396-201ENST00000411690 CHD5Q8TDI0 1954 aa6.34□□□□□ -1.39
LINC00396-201ENST00000411690 CCDC168Q8NDH2 2452 aa6.34□□□□□ -1.4
LINC00396-201ENST00000411690 MN1Q10571 1320 aaPredicted RBP6.33□□□□□ -1.4
LINC00396-201ENST00000411690 DNHD1Q96M86 4753 aa6.33□□□□□ -1.4
LINC00396-201ENST00000411690 SSU72P8A0A1W2PR75 194 aa6.33□□□□□ -1.4
LINC00396-201ENST00000411690 PRSS38A1L453 326 aa6.33□□□□□ -1.4
LINC00396-201ENST00000411690 TMEM200CA6NKL6 621 aa6.33□□□□□ -1.4
LINC00396-201ENST00000411690 A6NL46 340 aa6.33□□□□□ -1.4
LINC00396-201ENST00000411690 C21orf140B9A014 251 aa6.33□□□□□ -1.4
LINC00396-201ENST00000411690 F5H423 210 aaPredicted RBP6.33□□□□□ -1.4
LINC00396-201ENST00000411690 M0QYV0 167 aa6.33□□□□□ -1.4
LINC00396-201ENST00000411690 ZNF185O15231 689 aa6.33□□□□□ -1.4
LINC00396-201ENST00000411690 ZMPSTE24O75844 475 aa6.33□□□□□ -1.4
LINC00396-201ENST00000411690 KIAA0754O94854 1291 aa6.33□□□□□ -1.4
LINC00396-201ENST00000411690 NDUFA10O95299 355 aa6.33□□□□□ -1.4
LINC00396-201ENST00000411690 POP4O95707 220 aaKnown RBP6.33□□□□□ -1.4
LINC00396-201ENST00000411690 MT-ND3P03897 115 aa6.33□□□□□ -1.4
LINC00396-201ENST00000411690 NR3C1P04150 777 aa6.33□□□□□ -1.4
LINC00396-201ENST00000411690 KRT13P13646 458 aa6.33□□□□□ -1.4
LINC00396-201ENST00000411690 XPAP23025 273 aaPredicted RBP6.33□□□□□ -1.4
LINC00396-201ENST00000411690 AK4P27144 223 aaPredicted RBP6.33□□□□□ -1.4
LINC00396-201ENST00000411690 OR1E1P30953 314 aa6.33□□□□□ -1.4
LINC00396-201ENST00000411690 NDST2P52849 883 aa6.33□□□□□ -1.4
LINC00396-201ENST00000411690 ART1P52961 327 aa6.33□□□□□ -1.4
LINC00396-201ENST00000411690 RPS18P62269 152 aaKnown RBP6.33□□□□□ -1.4
LINC00396-201ENST00000411690 YWHAZP63104 245 aaKnown RBP6.33□□□□□ -1.4
LINC00396-201ENST00000411690 PITX1P78337 314 aaPredicted RBP6.33□□□□□ -1.4
LINC00396-201ENST00000411690 ELP6Q0PNE2 266 aa6.33□□□□□ -1.4
LINC00396-201ENST00000411690 PEX6Q13608 980 aa6.33□□□□□ -1.4
LINC00396-201ENST00000411690 ZNF630Q2M218 657 aaPredicted RBP6.33□□□□□ -1.4
LINC00396-201ENST00000411690 C5orf22Q49AR2 442 aa6.33□□□□□ -1.4
LINC00396-201ENST00000411690 TMEM52BQ4KMG9 183 aa6.33□□□□□ -1.4
LINC00396-201ENST00000411690 ALFQ53S48 1182 aa6.33□□□□□ -1.4
LINC00396-201ENST00000411690 KRT39Q6A163 491 aa6.33□□□□□ -1.4
LINC00396-201ENST00000411690 SLC30A9Q6PML9 568 aa6.33□□□□□ -1.4
LINC00396-201ENST00000411690 ZNF517Q6ZMY9 492 aaPredicted RBP6.33□□□□□ -1.4
LINC00396-201ENST00000411690 BNC2Q6ZN30 1099 aaPredicted RBP6.33□□□□□ -1.4
LINC00396-201ENST00000411690 INTS8Q75QN2 995 aaKnown RBP6.33□□□□□ -1.4
LINC00396-201ENST00000411690 BRAPQ7Z569 592 aa6.33□□□□□ -1.4
LINC00396-201ENST00000411690 ZNF761Q86XN6 746 aaPredicted RBP6.33□□□□□ -1.4
LINC00396-201ENST00000411690 PLA2G15Q8NCC3 412 aa6.33□□□□□ -1.4
LINC00396-201ENST00000411690 CT55Q8WUE5 264 aa6.33□□□□□ -1.4
LINC00396-201ENST00000411690 TMEM174Q8WUU8 243 aa6.33□□□□□ -1.4
LINC00396-201ENST00000411690 NCSTNQ92542 709 aa6.33□□□□□ -1.4
LINC00396-201ENST00000411690 SEMA4DQ92854 862 aa6.33□□□□□ -1.4
LINC00396-201ENST00000411690 FUBP1Q96AE4 644 aaKnown RBP6.33□□□□□ -1.4
LINC00396-201ENST00000411690 ISG20Q96AZ6 181 aaKnown RBP6.33□□□□□ -1.4
LINC00396-201ENST00000411690 SMAD5Q99717 465 aaKnown RBP6.33□□□□□ -1.4
LINC00396-201ENST00000411690 GSX2Q9BZM3 304 aa6.33□□□□□ -1.4
LINC00396-201ENST00000411690 ILKAPQ9H0C8 392 aaPredicted RBP6.33□□□□□ -1.4
LINC00396-201ENST00000411690 TSPAN10Q9H1Z9 355 aaPredicted RBP6.33□□□□□ -1.4
LINC00396-201ENST00000411690 SUDS3Q9H7L9 328 aaPredicted RBP6.33□□□□□ -1.4
LINC00396-201ENST00000411690 FAM204AQ9H8W3 233 aa6.33□□□□□ -1.4
LINC00396-201ENST00000411690 POPDC2Q9HBU9 364 aa6.33□□□□□ -1.4
LINC00396-201ENST00000411690 TMEM8AQ9HCN3 771 aa6.33□□□□□ -1.4
LINC00396-201ENST00000411690 LHX9Q9NQ69 397 aa6.33□□□□□ -1.4
LINC00396-201ENST00000411690 ST7Q9NRC1 585 aa6.33□□□□□ -1.4
LINC00396-201ENST00000411690 DDIT4Q9NX09 232 aa6.33□□□□□ -1.4
LINC00396-201ENST00000411690 RAB20Q9NX57 234 aa6.33□□□□□ -1.4
LINC00396-201ENST00000411690 GPR83Q9NYM4 423 aa6.33□□□□□ -1.4
LINC00396-201ENST00000411690 KLHL3Q9UH77 587 aa6.33□□□□□ -1.4
LINC00396-201ENST00000411690 USP25Q9UHP3 1055 aa6.33□□□□□ -1.4
LINC00396-201ENST00000411690 LNPEPQ9UIQ6 1025 aa6.33□□□□□ -1.4
LINC00396-201ENST00000411690 NTNG1Q9Y2I2 539 aa6.33□□□□□ -1.4
LINC00396-201ENST00000411690 CLIC4Q9Y696 253 aa6.33□□□□□ -1.4
LINC00396-201ENST00000411690 ANKHD1Q8IWZ3 2542 aaKnown RBP6.33□□□□□ -1.4
LINC00396-201ENST00000411690 FAM221AA4D161 298 aa6.32□□□□□ -1.4
LINC00396-201ENST00000411690 PDE2AO00408 941 aaPredicted RBP6.32□□□□□ -1.4
LINC00396-201ENST00000411690 PDXKO00764 312 aa6.32□□□□□ -1.4
LINC00396-201ENST00000411690 MAPK13O15264 365 aa6.32□□□□□ -1.4
LINC00396-201ENST00000411690 GRID2O43424 1007 aa6.32□□□□□ -1.4
LINC00396-201ENST00000411690 PAGE1O75459 146 aa6.32□□□□□ -1.4
LINC00396-201ENST00000411690 TMEM63AO94886 807 aa6.32□□□□□ -1.4
LINC00396-201ENST00000411690 F9P00740 461 aa6.32□□□□□ -1.4
LINC00396-201ENST00000411690 PLEKP08567 350 aaPredicted RBP6.32□□□□□ -1.4
LINC00396-201ENST00000411690 STSP08842 583 aa6.32□□□□□ -1.4
LINC00396-201ENST00000411690 HOXC4P09017 264 aaPredicted RBP6.32□□□□□ -1.4
LINC00396-201ENST00000411690 NFKB1P19838 968 aa6.32□□□□□ -1.4
LINC00396-201ENST00000411690 PTPN4P29074 926 aa6.32□□□□□ -1.4
LINC00396-201ENST00000411690 YWHAEP62258 255 aaKnown RBP6.32□□□□□ -1.4
LINC00396-201ENST00000411690 SNRPD1P62314 119 aaKnown RBP6.32□□□□□ -1.4
LINC00396-201ENST00000411690 RPS15P62841 145 aaKnown RBP6.32□□□□□ -1.4
LINC00396-201ENST00000411690 ARF5P84085 180 aa6.32□□□□□ -1.4
LINC00396-201ENST00000411690 CDK17Q00537 523 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms