RNA–Protein interactions for RNA: ENST00000409817.1

CXCR4-202, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS P3 BASIC

Gene CXCR4, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-202ENST00000409817 FBXO6Q9NRD1 293 aaPredicted RBP7.5□□□□□ -1.21
CXCR4-202ENST00000409817 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.5□□□□□ -1.21
CXCR4-202ENST00000409817 NLE1Q9NVX2 485 aaPredicted RBP7.5□□□□□ -1.21
CXCR4-202ENST00000409817 NCKIPSDQ9NZQ3 722 aa7.5□□□□□ -1.21
CXCR4-202ENST00000409817 LZTS1Q9Y250 596 aa7.5□□□□□ -1.21
CXCR4-202ENST00000409817 VWA7Q9Y334 891 aa7.5□□□□□ -1.21
CXCR4-202ENST00000409817 IRAK3Q9Y616 596 aa7.5□□□□□ -1.21
CXCR4-202ENST00000409817 KIAA1671Q9BY89 1806 aa7.5□□□□□ -1.21
CXCR4-202ENST00000409817 TRIM43BA6NCK2 446 aa7.49□□□□□ -1.21
CXCR4-202ENST00000409817 F8W8V4 182 aa7.49□□□□□ -1.21
CXCR4-202ENST00000409817 SLC22A2O15244 555 aa7.49□□□□□ -1.21
CXCR4-202ENST00000409817 CD3EAPO15446 510 aaKnown RBP7.49□□□□□ -1.21
CXCR4-202ENST00000409817 GYG2O15488 501 aa7.49□□□□□ -1.21
CXCR4-202ENST00000409817 GREM1O60565 184 aa7.49□□□□□ -1.21
CXCR4-202ENST00000409817 TBL1XO60907 577 aa7.49□□□□□ -1.21
CXCR4-202ENST00000409817 ZMPSTE24O75844 475 aa7.49□□□□□ -1.21
CXCR4-202ENST00000409817 WISP3O95389 354 aaPredicted RBP7.49□□□□□ -1.21
CXCR4-202ENST00000409817 KITP10721 976 aa7.49□□□□□ -1.21
CXCR4-202ENST00000409817 IRF1P10914 325 aa7.49□□□□□ -1.21
CXCR4-202ENST00000409817 ACPPP15309 386 aa7.49□□□□□ -1.21
CXCR4-202ENST00000409817 SAT1P21673 171 aa7.49□□□□□ -1.21
CXCR4-202ENST00000409817 SCNN1BP51168 640 aa7.49□□□□□ -1.21
CXCR4-202ENST00000409817 SUOXP51687 545 aa7.49□□□□□ -1.21
CXCR4-202ENST00000409817 ZNF140P52738 457 aaPredicted RBP7.49□□□□□ -1.21
CXCR4-202ENST00000409817 RPL26P61254 145 aaKnown RBP7.49□□□□□ -1.21
CXCR4-202ENST00000409817 NAA20P61599 178 aa7.49□□□□□ -1.21
CXCR4-202ENST00000409817 AP1S1P61966 158 aa7.49□□□□□ -1.21
CXCR4-202ENST00000409817 GALNT1Q10472 559 aaPredicted RBP7.49□□□□□ -1.21
CXCR4-202ENST00000409817 PPIGQ13427 754 aaKnown RBP eCLIP7.49□□□□□ -1.21
CXCR4-202ENST00000409817 CDH18Q13634 790 aa7.49□□□□□ -1.21
CXCR4-202ENST00000409817 CYTH1Q15438 398 aa7.49□□□□□ -1.21
CXCR4-202ENST00000409817 HSF5Q4G112 596 aaPredicted RBP7.49□□□□□ -1.21
CXCR4-202ENST00000409817 FSCBQ5H9T9 825 aa7.49□□□□□ -1.21
CXCR4-202ENST00000409817 WASHC2DQ5SRD0 308 aa7.49□□□□□ -1.21
CXCR4-202ENST00000409817 HECTD2Q5U5R9 776 aa7.49□□□□□ -1.21
CXCR4-202ENST00000409817 RETSATQ6NUM9 610 aa7.49□□□□□ -1.21
CXCR4-202ENST00000409817 FAM117BQ6P1L5 589 aa7.49□□□□□ -1.21
CXCR4-202ENST00000409817 LILRA6Q6PI73 481 aa7.49□□□□□ -1.21
CXCR4-202ENST00000409817 CNSTQ6PJW8 725 aa7.49□□□□□ -1.21
CXCR4-202ENST00000409817 ERMP1Q7Z2K6 904 aa7.49□□□□□ -1.21
CXCR4-202ENST00000409817 PTAR1Q7Z6K3 402 aaPredicted RBP7.49□□□□□ -1.21
CXCR4-202ENST00000409817 ALYREFQ86V81 257 aaKnown RBP7.49□□□□□ -1.21
CXCR4-202ENST00000409817 TMPRSS6Q8IU80 811 aa7.49□□□□□ -1.21
CXCR4-202ENST00000409817 MFSD6LQ8IWD5 586 aa7.49□□□□□ -1.21
CXCR4-202ENST00000409817 KIF2BQ8N4N8 673 aa7.49□□□□□ -1.21
CXCR4-202ENST00000409817 OR52K2Q8NGK3 314 aa7.49□□□□□ -1.21
CXCR4-202ENST00000409817 OR4L1Q8NH43 312 aa7.49□□□□□ -1.21
CXCR4-202ENST00000409817 TRIM43Q96BQ3 446 aaPredicted RBP7.49□□□□□ -1.21
CXCR4-202ENST00000409817 NXNL1Q96CM4 212 aa7.49□□□□□ -1.21
CXCR4-202ENST00000409817 RMDN1Q96DB5 314 aa7.49□□□□□ -1.21
CXCR4-202ENST00000409817 ABHD17AQ96GS6 310 aa7.49□□□□□ -1.21
CXCR4-202ENST00000409817 CNDP1Q96KN2 507 aa7.49□□□□□ -1.21
CXCR4-202ENST00000409817 FEM1AQ9BSK4 669 aa7.49□□□□□ -1.21
CXCR4-202ENST00000409817 TRMOQ9BU70 441 aa7.49□□□□□ -1.21
CXCR4-202ENST00000409817 CCDC106Q9BWC9 280 aa7.49□□□□□ -1.21
CXCR4-202ENST00000409817 EMILIN2Q9BXX0 1053 aa7.49□□□□□ -1.21
CXCR4-202ENST00000409817 C1orf21Q9H246 121 aa7.49□□□□□ -1.21
CXCR4-202ENST00000409817 CATSPERZQ9NTU4 200 aa7.49□□□□□ -1.21
CXCR4-202ENST00000409817 ARL8BQ9NVJ2 186 aa7.49□□□□□ -1.21
CXCR4-202ENST00000409817 DNMT3BQ9UBC3 853 aaKnown RBP7.49□□□□□ -1.21
CXCR4-202ENST00000409817 XPR1Q9UBH6 696 aa7.49□□□□□ -1.21
CXCR4-202ENST00000409817 MARCOQ9UEW3 520 aaPredicted RBP7.49□□□□□ -1.21
CXCR4-202ENST00000409817 TAGLN3Q9UI15 199 aa7.49□□□□□ -1.21
CXCR4-202ENST00000409817 TRIM33Q9UPN9 1127 aa7.49□□□□□ -1.21
CXCR4-202ENST00000409817 INSL6Q9Y581 213 aa7.49□□□□□ -1.21
CXCR4-202ENST00000409817 CPQQ9Y646 472 aa7.49□□□□□ -1.21
CXCR4-202ENST00000409817 TRAV19A0A0A6YYK7 116 aa7.49□□□□□ -1.21
CXCR4-202ENST00000409817 GOLGA8QA0A0J9YX86 632 aa7.49□□□□□ -1.21
CXCR4-202ENST00000409817 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.49□□□□□ -1.21
CXCR4-202ENST00000409817 GOLGA8OA6NCC3 632 aa7.49□□□□□ -1.21
CXCR4-202ENST00000409817 PALM2-AKAP2B1ALY0 433 aaPredicted RBP7.49□□□□□ -1.21
CXCR4-202ENST00000409817 ANKRD66B4E2M5 251 aa7.49□□□□□ -1.21
CXCR4-202ENST00000409817 SPECC1L-ADORA2AF8WAN1 911 aa7.49□□□□□ -1.21
CXCR4-202ENST00000409817 GOLGA8NF8WBI6 632 aa7.49□□□□□ -1.21
CXCR4-202ENST00000409817 H7C0S8 307 aa7.49□□□□□ -1.21
CXCR4-202ENST00000409817 ZNF195O14628 629 aa7.49□□□□□ -1.21
CXCR4-202ENST00000409817 HDAC3O15379 428 aa7.49□□□□□ -1.21
CXCR4-202ENST00000409817 TGM5O43548 720 aa7.49□□□□□ -1.21
CXCR4-202ENST00000409817 LYPLA1O75608 230 aaPredicted RBP7.49□□□□□ -1.21
CXCR4-202ENST00000409817 TMCC1O94876 653 aa7.49□□□□□ -1.21
CXCR4-202ENST00000409817 GOT2P00505 430 aaKnown RBP7.49□□□□□ -1.21
CXCR4-202ENST00000409817 LMNAP02545 664 aaKnown RBP7.49□□□□□ -1.21
CXCR4-202ENST00000409817 CNPP09543 421 aaKnown RBP7.49□□□□□ -1.21
CXCR4-202ENST00000409817 SBK3P0C264 359 aa7.49□□□□□ -1.21
CXCR4-202ENST00000409817 CD9P21926 228 aa7.49□□□□□ -1.21
CXCR4-202ENST00000409817 LPOP22079 712 aaPredicted RBP7.49□□□□□ -1.21
CXCR4-202ENST00000409817 FDXRP22570 491 aa7.49□□□□□ -1.21
CXCR4-202ENST00000409817 CCND1P24385 295 aa7.49□□□□□ -1.21
CXCR4-202ENST00000409817 DDX6P26196 483 aaKnown RBP eCLIP7.49□□□□□ -1.21
CXCR4-202ENST00000409817 GABRR2P28476 465 aa7.49□□□□□ -1.21
CXCR4-202ENST00000409817 PMLP29590 882 aa7.49□□□□□ -1.21
CXCR4-202ENST00000409817 PRDX6P30041 224 aa7.49□□□□□ -1.21
CXCR4-202ENST00000409817 ADSLP30566 484 aaPredicted RBP7.49□□□□□ -1.21
CXCR4-202ENST00000409817 GRIA4P48058 902 aa7.49□□□□□ -1.21
CXCR4-202ENST00000409817 CSNK1DP48730 415 aa7.49□□□□□ -1.21
CXCR4-202ENST00000409817 RPL14P50914 215 aaKnown RBP7.49□□□□□ -1.21
CXCR4-202ENST00000409817 SGSHP51688 502 aa7.49□□□□□ -1.21
CXCR4-202ENST00000409817 STC1P52823 247 aa7.49□□□□□ -1.21
CXCR4-202ENST00000409817 ARF5P84085 180 aa7.49□□□□□ -1.21
CXCR4-202ENST00000409817 TUBB3Q13509 450 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms