RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 ZNF189O75820 626 aaPredicted RBP11.38□□□□□ -0.59
SNX13-202ENST00000409604 CFIP05156 583 aa11.38□□□□□ -0.59
SNX13-202ENST00000409604 ACP5P13686 325 aa11.38□□□□□ -0.59
SNX13-202ENST00000409604 SLC1A2P43004 574 aa11.38□□□□□ -0.59
SNX13-202ENST00000409604 SLC1A6P48664 564 aa11.38□□□□□ -0.59
SNX13-202ENST00000409604 GALNT2Q10471 571 aa11.38□□□□□ -0.59
SNX13-202ENST00000409604 RUNX3Q13761 415 aa11.38□□□□□ -0.59
SNX13-202ENST00000409604 LRRC66Q68CR7 880 aa11.38□□□□□ -0.59
SNX13-202ENST00000409604 PM20D1Q6GTS8 502 aa11.38□□□□□ -0.59
SNX13-202ENST00000409604 DPY19L2P1Q6NXN4 242 aa11.38□□□□□ -0.59
SNX13-202ENST00000409604 OOSP2Q86WS3 158 aa11.38□□□□□ -0.59
SNX13-202ENST00000409604 C10orf107Q8IVU9 208 aa11.38□□□□□ -0.59
SNX13-202ENST00000409604 RAVER1Q8IY67 606 aaKnown RBP11.38□□□□□ -0.59
SNX13-202ENST00000409604 TEX9Q8N6V9 391 aa11.38□□□□□ -0.59
SNX13-202ENST00000409604 NAT8LQ8N9F0 302 aa11.38□□□□□ -0.59
SNX13-202ENST00000409604 TSTD1Q8NFU3 115 aa11.38□□□□□ -0.59
SNX13-202ENST00000409604 APOPT1Q96IL0 206 aa11.38□□□□□ -0.59
SNX13-202ENST00000409604 USP29Q9HBJ7 922 aa11.38□□□□□ -0.59
SNX13-202ENST00000409604 HAO1Q9UJM8 370 aa11.38□□□□□ -0.59
SNX13-202ENST00000409604 ARL2BPQ9Y2Y0 163 aa11.38□□□□□ -0.59
SNX13-202ENST00000409604 TIMM22Q9Y584 194 aa11.38□□□□□ -0.59
SNX13-202ENST00000409604 ANGPT2O15123 496 aa11.38□□□□□ -0.59
SNX13-202ENST00000409604 RPP40O75818 363 aaKnown RBP11.38□□□□□ -0.59
SNX13-202ENST00000409604 RBP1P09455 135 aa11.38□□□□□ -0.59
SNX13-202ENST00000409604 FAM163BP0C2L3 166 aa11.38□□□□□ -0.59
SNX13-202ENST00000409604 IRF9Q00978 393 aa11.38□□□□□ -0.59
SNX13-202ENST00000409604 MYLK3Q32MK0 819 aa11.38□□□□□ -0.59
SNX13-202ENST00000409604 SPDYE7PQ495Y7 208 aa11.38□□□□□ -0.59
SNX13-202ENST00000409604 PPP1R15BQ5SWA1 713 aa11.38□□□□□ -0.59
SNX13-202ENST00000409604 C1orf146Q5VVC0 180 aa11.38□□□□□ -0.59
SNX13-202ENST00000409604 LRRC8EQ6NSJ5 796 aa11.38□□□□□ -0.59
SNX13-202ENST00000409604 SLC30A9Q6PML9 568 aa11.38□□□□□ -0.59
SNX13-202ENST00000409604 PARGQ86W56 976 aa11.38□□□□□ -0.59
SNX13-202ENST00000409604 TDHQ8IZJ6 230 aa11.38□□□□□ -0.59
SNX13-202ENST00000409604 EFCAB3Q8N7B9 438 aa11.38□□□□□ -0.59
SNX13-202ENST00000409604 ZNF557Q8N988 423 aaPredicted RBP11.38□□□□□ -0.59
SNX13-202ENST00000409604 ZNF75CPQ92670 426 aaPredicted RBP11.38□□□□□ -0.59
SNX13-202ENST00000409604 MTBPQ96DY7 904 aa11.38□□□□□ -0.59
SNX13-202ENST00000409604 ZNF395Q9H8N7 513 aaPredicted RBP11.38□□□□□ -0.59
SNX13-202ENST00000409604 SIRPGQ9P1W8 387 aa11.38□□□□□ -0.59
SNX13-202ENST00000409604 RAB10P61026 200 aa11.38□□□□□ -0.59
SNX13-202ENST00000409604 NIPAL4Q0D2K0 466 aa11.38□□□□□ -0.59
SNX13-202ENST00000409604 BST1Q10588 318 aa11.38□□□□□ -0.59
SNX13-202ENST00000409604 HECTD2Q5U5R9 776 aa11.38□□□□□ -0.59
SNX13-202ENST00000409604 ANKS6Q68DC2 871 aa11.38□□□□□ -0.59
SNX13-202ENST00000409604 TSPAN33Q86UF1 283 aa11.38□□□□□ -0.59
SNX13-202ENST00000409604 CXorf40BQ96DE9 158 aa11.38□□□□□ -0.59
SNX13-202ENST00000409604 PANX3Q96QZ0 392 aa11.38□□□□□ -0.59
SNX13-202ENST00000409604 ZCCHC2Q9C0B9 1178 aaKnown RBP11.38□□□□□ -0.59
SNX13-202ENST00000409604 SH3BP4Q9P0V3 963 aa11.38□□□□□ -0.59
SNX13-202ENST00000409604 AURKCQ9UQB9 309 aa11.38□□□□□ -0.59
SNX13-202ENST00000409604 CDYLQ9Y232 598 aa11.38□□□□□ -0.59
SNX13-202ENST00000409604 USP1O94782 785 aa11.37□□□□□ -0.59
SNX13-202ENST00000409604 PKMP14618 531 aaKnown RBP11.37□□□□□ -0.59
SNX13-202ENST00000409604 IL4RP24394 825 aa11.37□□□□□ -0.59
SNX13-202ENST00000409604 HTR1BP28222 390 aa11.37□□□□□ -0.59
SNX13-202ENST00000409604 ETV3P41162 512 aa11.37□□□□□ -0.59
SNX13-202ENST00000409604 IRF8Q02556 426 aa11.37□□□□□ -0.59
SNX13-202ENST00000409604 CDC16Q13042 620 aa11.37□□□□□ -0.59
SNX13-202ENST00000409604 PGS1Q32NB8 556 aa11.37□□□□□ -0.59
SNX13-202ENST00000409604 FAM78AQ5JUQ0 283 aa11.37□□□□□ -0.59
SNX13-202ENST00000409604 RBM20Q5T481 1227 aaKnown RBP11.37□□□□□ -0.59
SNX13-202ENST00000409604 TPRG1Q6ZUI0 275 aa11.37□□□□□ -0.59
SNX13-202ENST00000409604 UBR7Q8N806 425 aa11.37□□□□□ -0.59
SNX13-202ENST00000409604 CDKN2AIPNLQ96HQ2 116 aa11.37□□□□□ -0.59
SNX13-202ENST00000409604 RSRC1Q96IZ7 334 aaKnown RBP11.37□□□□□ -0.59
SNX13-202ENST00000409604 P2RY13Q9BPV8 354 aa11.37□□□□□ -0.59
SNX13-202ENST00000409604 CCDC3Q9BQI4 270 aa11.37□□□□□ -0.59
SNX13-202ENST00000409604 CCDC167Q9P0B6 97 aa11.37□□□□□ -0.59
SNX13-202ENST00000409604 CYP8B1Q9UNU6 501 aa11.37□□□□□ -0.59
SNX13-202ENST00000409604 CUL9Q8IWT3 2517 aa11.37□□□□□ -0.59
SNX13-202ENST00000409604 DCLK1O15075 740 aa11.37□□□□□ -0.59
SNX13-202ENST00000409604 MAFKO60675 156 aa11.37□□□□□ -0.59
SNX13-202ENST00000409604 CPSF4O95639 269 aaKnown RBP11.37□□□□□ -0.59
SNX13-202ENST00000409604 DHPSP49366 369 aaPredicted RBP11.37□□□□□ -0.59
SNX13-202ENST00000409604 KLF1Q13351 362 aaPredicted RBP11.37□□□□□ -0.59
SNX13-202ENST00000409604 SEL1L3Q68CR1 1132 aa11.37□□□□□ -0.59
SNX13-202ENST00000409604 SETD3Q86TU7 594 aaPredicted RBP11.37□□□□□ -0.59
SNX13-202ENST00000409604 C11orf74Q86VG3 221 aa11.37□□□□□ -0.59
SNX13-202ENST00000409604 AHCYL2Q96HN2 611 aaKnown RBP11.37□□□□□ -0.59
SNX13-202ENST00000409604 FERD3LQ96RJ6 166 aa11.37□□□□□ -0.59
SNX13-202ENST00000409604 STK39Q9UEW8 545 aa11.37□□□□□ -0.59
SNX13-202ENST00000409604 CLEC4EQ9ULY5 219 aa11.37□□□□□ -0.59
SNX13-202ENST00000409604 TRIM33Q9UPN9 1127 aa11.37□□□□□ -0.59
SNX13-202ENST00000409604 COL11A1P12107 1806 aaPredicted RBP11.37□□□□□ -0.59
SNX13-202ENST00000409604 RAD51BO15315 384 aa11.37□□□□□ -0.59
SNX13-202ENST00000409604 DCXO43602 365 aa11.37□□□□□ -0.59
SNX13-202ENST00000409604 OR1I1O60431 355 aa11.37□□□□□ -0.59
SNX13-202ENST00000409604 PRAMEF11O60813 436 aa11.37□□□□□ -0.59
SNX13-202ENST00000409604 EPHA3P29320 983 aa11.37□□□□□ -0.59
SNX13-202ENST00000409604 GRIA4P48058 902 aa11.37□□□□□ -0.59
SNX13-202ENST00000409604 C1orf61Q13536 156 aa11.37□□□□□ -0.59
SNX13-202ENST00000409604 PKDCCQ504Y2 493 aa11.37□□□□□ -0.59
SNX13-202ENST00000409604 IL27RAQ6UWB1 636 aa11.37□□□□□ -0.59
SNX13-202ENST00000409604 ENPP7Q6UWV6 458 aa11.37□□□□□ -0.59
SNX13-202ENST00000409604 DEFB123Q8N688 67 aa11.37□□□□□ -0.59
SNX13-202ENST00000409604 ZNF614Q8N883 585 aa11.37□□□□□ -0.59
SNX13-202ENST00000409604 SLC26A7Q8TE54 656 aa11.37□□□□□ -0.59
SNX13-202ENST00000409604 FCRL5Q96RD9 977 aa11.37□□□□□ -0.59
SNX13-202ENST00000409604 C1orf50Q9BV19 199 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms