RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 RBM15BQ8NDT2 890 aaKnown RBP20.65■□□□□ 0.9
USP39-203ENST00000409470 EXT2Q93063 718 aa20.65■□□□□ 0.9
USP39-203ENST00000409470 RPL10LQ96L21 214 aaKnown RBP20.65■□□□□ 0.9
USP39-203ENST00000409470 EML4Q9HC35 981 aaKnown RBP20.65■□□□□ 0.9
USP39-203ENST00000409470 INTS6Q9UL03 887 aaKnown RBP20.65■□□□□ 0.9
USP39-203ENST00000409470 DCXO43602 365 aa20.64■□□□□ 0.89
USP39-203ENST00000409470 WFS1O76024 890 aa20.64■□□□□ 0.89
USP39-203ENST00000409470 KCNC1P48547 511 aa20.64■□□□□ 0.89
USP39-203ENST00000409470 SLC20A2Q08357 652 aa20.64■□□□□ 0.89
USP39-203ENST00000409470 PDCD2Q16342 344 aaPredicted RBP20.64■□□□□ 0.89
USP39-203ENST00000409470 PITRM1Q5JRX3 1037 aa20.64■□□□□ 0.89
USP39-203ENST00000409470 AARS2Q5JTZ9 985 aaKnown RBP20.64■□□□□ 0.89
USP39-203ENST00000409470 TAS2R42Q7RTR8 314 aa20.64■□□□□ 0.89
USP39-203ENST00000409470 SUGP1Q8IWZ8 645 aaKnown RBP20.64■□□□□ 0.89
USP39-203ENST00000409470 ARHGAP24Q8N264 748 aa20.64■□□□□ 0.89
USP39-203ENST00000409470 MAGEC3Q8TD91 643 aa20.64■□□□□ 0.89
USP39-203ENST00000409470 AGAP11Q8TF27 550 aa20.64■□□□□ 0.89
USP39-203ENST00000409470 C17orf80Q9BSJ5 609 aa20.64■□□□□ 0.89
USP39-203ENST00000409470 IL17CQ9P0M4 197 aa20.64■□□□□ 0.89
USP39-203ENST00000409470 CDYLQ9Y232 598 aa20.64■□□□□ 0.89
USP39-203ENST00000409470 H7C0S8 307 aa20.63■□□□□ 0.89
USP39-203ENST00000409470 PRAMEF12O95522 483 aa20.63■□□□□ 0.89
USP39-203ENST00000409470 RHOP08100 348 aa20.63■□□□□ 0.89
USP39-203ENST00000409470 EN2P19622 333 aaPredicted RBP20.63■□□□□ 0.89
USP39-203ENST00000409470 EPHA3P29320 983 aa20.63■□□□□ 0.89
USP39-203ENST00000409470 PGM1P36871 562 aa20.63■□□□□ 0.89
USP39-203ENST00000409470 CSNK1DP48730 415 aa20.63■□□□□ 0.89
USP39-203ENST00000409470 EPHA5P54756 1037 aa20.63■□□□□ 0.89
USP39-203ENST00000409470 KDM1BQ8NB78 822 aa20.63■□□□□ 0.89
USP39-203ENST00000409470 FBXO27Q8NI29 283 aa20.63■□□□□ 0.89
USP39-203ENST00000409470 HERVK_113Q902F9 699 aa20.63■□□□□ 0.89
USP39-203ENST00000409470 ATP13A3Q9H7F0 1226 aa20.63■□□□□ 0.89
USP39-203ENST00000409470 MTCL1Q9Y4B5 1905 aaKnown RBP20.63■□□□□ 0.89
USP39-203ENST00000409470 PYGLP06737 847 aa20.63■□□□□ 0.89
USP39-203ENST00000409470 IMPDH1P20839 514 aa20.63■□□□□ 0.89
USP39-203ENST00000409470 HMGCLP35914 325 aa20.63■□□□□ 0.89
USP39-203ENST00000409470 CTSOP43234 321 aaPredicted RBP20.63■□□□□ 0.89
USP39-203ENST00000409470 RPL26P61254 145 aaKnown RBP20.63■□□□□ 0.89
USP39-203ENST00000409470 RAD51Q06609 339 aa20.63■□□□□ 0.89
USP39-203ENST00000409470 DGKKQ5KSL6 1271 aa20.63■□□□□ 0.89
USP39-203ENST00000409470 WASHC2DQ5SRD0 308 aa20.63■□□□□ 0.89
USP39-203ENST00000409470 PAQR3Q6TCH7 311 aa20.63■□□□□ 0.89
USP39-203ENST00000409470 TMEM25Q86YD3 366 aa20.63■□□□□ 0.89
USP39-203ENST00000409470 POU5F2Q8N7G0 328 aa20.63■□□□□ 0.89
USP39-203ENST00000409470 PHOSPHO2Q8TCD6 241 aa20.63■□□□□ 0.89
USP39-203ENST00000409470 OSBPL1AQ9BXW6 950 aa20.63■□□□□ 0.89
USP39-203ENST00000409470 RPL26L1Q9UNX3 145 aaKnown RBP20.63■□□□□ 0.89
USP39-203ENST00000409470 SLC30A1Q9Y6M5 507 aa20.63■□□□□ 0.89
USP39-203ENST00000409470 HELZP42694 1942 aaKnown RBP20.62■□□□□ 0.89
USP39-203ENST00000409470 TMEM233B4DJY2 109 aa20.62■□□□□ 0.89
USP39-203ENST00000409470 OR1I1O60431 355 aa20.62■□□□□ 0.89
USP39-203ENST00000409470 SOCS5O75159 536 aa20.62■□□□□ 0.89
USP39-203ENST00000409470 MOSPD3O75425 235 aa20.62■□□□□ 0.89
USP39-203ENST00000409470 TPBGLP0DKB5 382 aa20.62■□□□□ 0.89
USP39-203ENST00000409470 PKMP14618 531 aaKnown RBP20.62■□□□□ 0.89
USP39-203ENST00000409470 CCND1P24385 295 aa20.62■□□□□ 0.89
USP39-203ENST00000409470 HLA-FP30511 346 aa20.62■□□□□ 0.89
USP39-203ENST00000409470 STK19P49842 368 aaPredicted RBP20.62■□□□□ 0.89
USP39-203ENST00000409470 LSM12Q3MHD2 195 aaKnown RBP20.62■□□□□ 0.89
USP39-203ENST00000409470 DNAL1Q4LDG9 190 aa20.62■□□□□ 0.89
USP39-203ENST00000409470 NXNQ6DKJ4 435 aa20.62■□□□□ 0.89
USP39-203ENST00000409470 RPS27LQ71UM5 84 aaKnown RBP20.62■□□□□ 0.89
USP39-203ENST00000409470 RTL10Q7L3V2 364 aa20.62■□□□□ 0.89
USP39-203ENST00000409470 PHTF2Q8N3S3 785 aa20.62■□□□□ 0.89
USP39-203ENST00000409470 AFAP1L2Q8N4X5 818 aa20.62■□□□□ 0.89
USP39-203ENST00000409470 OR2AP1Q8NGE2 309 aa20.62■□□□□ 0.89
USP39-203ENST00000409470 CMTM5Q96DZ9 223 aa20.62■□□□□ 0.89
USP39-203ENST00000409470 GPR21Q99679 349 aa20.62■□□□□ 0.89
USP39-203ENST00000409470 MMADHCQ9H3L0 296 aaPredicted RBP20.62■□□□□ 0.89
USP39-203ENST00000409470 DENND2DQ9H6A0 471 aaPredicted RBP20.62■□□□□ 0.89
USP39-203ENST00000409470 TDP1Q9NUW8 608 aa20.62■□□□□ 0.89
USP39-203ENST00000409470 FIS1Q9Y3D6 152 aa20.62■□□□□ 0.89
USP39-203ENST00000409470 RWDD3Q9Y3V2 267 aa20.62■□□□□ 0.89
USP39-203ENST00000409470 NEDD8-MDP1E9PL57 170 aa20.61■□□□□ 0.89
USP39-203ENST00000409470 H3BMM5 538 aa20.61■□□□□ 0.89
USP39-203ENST00000409470 HTRA2O43464 458 aaPredicted RBP20.61■□□□□ 0.89
USP39-203ENST00000409470 VPS26AO75436 327 aa20.61■□□□□ 0.89
USP39-203ENST00000409470 EPCAMP16422 314 aa20.61■□□□□ 0.89
USP39-203ENST00000409470 SERPINA4P29622 427 aa20.61■□□□□ 0.89
USP39-203ENST00000409470 IRS1P35568 1242 aa20.61■□□□□ 0.89
USP39-203ENST00000409470 COPAP53621 1224 aa20.61■□□□□ 0.89
USP39-203ENST00000409470 CACNG1Q06432 222 aa20.61■□□□□ 0.89
USP39-203ENST00000409470 OR4D1Q15615 310 aa20.61■□□□□ 0.89
USP39-203ENST00000409470 FRMD7Q6ZUT3 714 aa20.61■□□□□ 0.89
USP39-203ENST00000409470 C7orf61Q8IZ16 206 aa20.61■□□□□ 0.89
USP39-203ENST00000409470 RIN3Q8TB24 985 aa20.61■□□□□ 0.89
USP39-203ENST00000409470 EID2BQ96D98 161 aa20.61■□□□□ 0.89
USP39-203ENST00000409470 BIRC8Q96P09 236 aa20.61■□□□□ 0.89
USP39-203ENST00000409470 TFB2MQ9H5Q4 396 aaKnown RBP20.61■□□□□ 0.89
USP39-203ENST00000409470 ZFYVE1Q9HBF4 777 aa20.61■□□□□ 0.89
USP39-203ENST00000409470 MED16Q9Y2X0 877 aa20.61■□□□□ 0.89
USP39-203ENST00000409470 A0A0J9YYE9 177 aa20.61■□□□□ 0.89
USP39-203ENST00000409470 C1orf232A0A0U1RR37 186 aa20.61■□□□□ 0.89
USP39-203ENST00000409470 LINC01553A4QN01 128 aa20.61■□□□□ 0.89
USP39-203ENST00000409470 TRPC5OSA6NMA1 111 aa20.61■□□□□ 0.89
USP39-203ENST00000409470 MEI4A8MW99 385 aa20.61■□□□□ 0.89
USP39-203ENST00000409470 BNIP3LO60238 219 aa20.61■□□□□ 0.89
USP39-203ENST00000409470 ZNF821O75541 412 aaPredicted RBP20.61■□□□□ 0.89
USP39-203ENST00000409470 SUPT7LO94864 414 aa20.61■□□□□ 0.89
USP39-203ENST00000409470 TRBC1P01850 177 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms