RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 AURKAO14965 403 aa10.63□□□□□ -0.71
NIF3L1-204ENST00000409357 SYNCRIPO60506 623 aaKnown RBP10.63□□□□□ -0.71
NIF3L1-204ENST00000409357 SUPT20HL2P0C7V6 817 aa10.63□□□□□ -0.71
NIF3L1-204ENST00000409357 PSMA4P25789 261 aaKnown RBP10.63□□□□□ -0.71
NIF3L1-204ENST00000409357 TYK2P29597 1187 aa10.63□□□□□ -0.71
NIF3L1-204ENST00000409357 MSX2P35548 267 aaPredicted RBP10.63□□□□□ -0.71
NIF3L1-204ENST00000409357 PBX2P40425 430 aa10.63□□□□□ -0.71
NIF3L1-204ENST00000409357 NR4A2P43354 598 aa10.63□□□□□ -0.71
NIF3L1-204ENST00000409357 PTPN9P43378 593 aa10.63□□□□□ -0.71
NIF3L1-204ENST00000409357 CSRP3P50461 194 aa10.63□□□□□ -0.71
NIF3L1-204ENST00000409357 COPZ1P61923 177 aa10.63□□□□□ -0.71
NIF3L1-204ENST00000409357 DNASE1L3Q13609 305 aa10.63□□□□□ -0.71
NIF3L1-204ENST00000409357 MTMR1Q13613 665 aa10.63□□□□□ -0.71
NIF3L1-204ENST00000409357 GPNMBQ14956 572 aa10.63□□□□□ -0.71
NIF3L1-204ENST00000409357 PSMD5Q16401 504 aa10.63□□□□□ -0.71
NIF3L1-204ENST00000409357 TBCELQ5QJ74 424 aa10.63□□□□□ -0.71
NIF3L1-204ENST00000409357 LIPMQ5VYY2 423 aa10.63□□□□□ -0.71
NIF3L1-204ENST00000409357 ZYG11AQ6WRX3 759 aa10.63□□□□□ -0.71
NIF3L1-204ENST00000409357 CYP4V2Q6ZWL3 525 aaPredicted RBP10.63□□□□□ -0.71
NIF3L1-204ENST00000409357 LIX1LQ8IVB5 337 aa10.63□□□□□ -0.71
NIF3L1-204ENST00000409357 CACTIN-AS1Q8N1I8 211 aa10.63□□□□□ -0.71
NIF3L1-204ENST00000409357 CLIP4Q8N3C7 705 aa10.63□□□□□ -0.71
NIF3L1-204ENST00000409357 C7orf31Q8N865 590 aa10.63□□□□□ -0.71
NIF3L1-204ENST00000409357 DYNC2LI1Q8TCX1 351 aa10.63□□□□□ -0.71
NIF3L1-204ENST00000409357 URGCPQ8TCY9 931 aa10.63□□□□□ -0.71
NIF3L1-204ENST00000409357 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.63□□□□□ -0.71
NIF3L1-204ENST00000409357 GPRASP2Q96D09 838 aa10.63□□□□□ -0.71
NIF3L1-204ENST00000409357 CYP2S1Q96SQ9 504 aa10.63□□□□□ -0.71
NIF3L1-204ENST00000409357 TEKT3Q9BXF9 490 aa10.63□□□□□ -0.71
NIF3L1-204ENST00000409357 PCDHAC1Q9H158 963 aa10.63□□□□□ -0.71
NIF3L1-204ENST00000409357 TTYH1Q9H313 450 aaPredicted RBP10.63□□□□□ -0.71
NIF3L1-204ENST00000409357 RNPEPQ9H4A4 650 aa10.63□□□□□ -0.71
NIF3L1-204ENST00000409357 SYBUQ9NX95 663 aa10.63□□□□□ -0.71
NIF3L1-204ENST00000409357 SNTG2Q9NY99 539 aa10.63□□□□□ -0.71
NIF3L1-204ENST00000409357 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.63□□□□□ -0.71
NIF3L1-204ENST00000409357 A0A1W2PQ67 120 aa10.62□□□□□ -0.71
NIF3L1-204ENST00000409357 TISP43B9A030 160 aa10.62□□□□□ -0.71
NIF3L1-204ENST00000409357 H3BRB1 525 aa10.62□□□□□ -0.71
NIF3L1-204ENST00000409357 ZW10O43264 779 aa10.62□□□□□ -0.71
NIF3L1-204ENST00000409357 NPHS1O60500 1241 aa10.62□□□□□ -0.71
NIF3L1-204ENST00000409357 TSPAN1O60635 241 aa10.62□□□□□ -0.71
NIF3L1-204ENST00000409357 GAS7O60861 476 aa10.62□□□□□ -0.71
NIF3L1-204ENST00000409357 KCNK2O95069 426 aa10.62□□□□□ -0.71
NIF3L1-204ENST00000409357 KCNH1O95259 989 aa10.62□□□□□ -0.71
NIF3L1-204ENST00000409357 ALBP02768 609 aa10.62□□□□□ -0.71
NIF3L1-204ENST00000409357 ARP10275 920 aa10.62□□□□□ -0.71
NIF3L1-204ENST00000409357 FGFR3P22607 806 aa10.62□□□□□ -0.71
NIF3L1-204ENST00000409357 RPL10P27635 214 aaKnown RBP10.62□□□□□ -0.71
NIF3L1-204ENST00000409357 AXLP30530 894 aa10.62□□□□□ -0.71
NIF3L1-204ENST00000409357 RFC2P35250 354 aa10.62□□□□□ -0.71
NIF3L1-204ENST00000409357 GALK2Q01415 458 aa10.62□□□□□ -0.71
NIF3L1-204ENST00000409357 ZNF45Q02386 682 aa10.62□□□□□ -0.71
NIF3L1-204ENST00000409357 PTPN11Q06124 597 aaPredicted RBP10.62□□□□□ -0.71
NIF3L1-204ENST00000409357 FOXM1Q08050 763 aa10.62□□□□□ -0.71
NIF3L1-204ENST00000409357 TCTN1Q2MV58 587 aa10.62□□□□□ -0.71
NIF3L1-204ENST00000409357 COQ5Q5HYK3 327 aa10.62□□□□□ -0.71
NIF3L1-204ENST00000409357 BRMS1LQ5PSV4 323 aa10.62□□□□□ -0.71
NIF3L1-204ENST00000409357 TTC23Q5W5X9 447 aa10.62□□□□□ -0.71
NIF3L1-204ENST00000409357 GPR153Q6NV75 609 aa10.62□□□□□ -0.71
NIF3L1-204ENST00000409357 TAF2Q6P1X5 1199 aa10.62□□□□□ -0.71
NIF3L1-204ENST00000409357 XRRA1Q6P2D8 792 aa10.62□□□□□ -0.71
NIF3L1-204ENST00000409357 NAPRTQ6XQN6 538 aa10.62□□□□□ -0.71
NIF3L1-204ENST00000409357 THAP5Q7Z6K1 395 aa10.62□□□□□ -0.71
NIF3L1-204ENST00000409357 ELMOD2Q8IZ81 293 aa10.62□□□□□ -0.71
NIF3L1-204ENST00000409357 SIX5Q8N196 739 aa10.62□□□□□ -0.71
NIF3L1-204ENST00000409357 ARFGAP1Q8N6T3 406 aa10.62□□□□□ -0.71
NIF3L1-204ENST00000409357 RNF148Q8N7C7 305 aa10.62□□□□□ -0.71
NIF3L1-204ENST00000409357 BPIFB6Q8NFQ5 453 aa10.62□□□□□ -0.71
NIF3L1-204ENST00000409357 OR7A2PQ8NGA2 310 aa10.62□□□□□ -0.71
NIF3L1-204ENST00000409357 OR13J1Q8NGT2 312 aa10.62□□□□□ -0.71
NIF3L1-204ENST00000409357 OSCP1Q8WVF1 389 aa10.62□□□□□ -0.71
NIF3L1-204ENST00000409357 CYGBQ8WWM9 190 aa10.62□□□□□ -0.71
NIF3L1-204ENST00000409357 POMGNT1Q8WZA1 660 aa10.62□□□□□ -0.71
NIF3L1-204ENST00000409357 PEX13Q92968 403 aa10.62□□□□□ -0.71
NIF3L1-204ENST00000409357 ZNF566Q969W8 418 aa10.62□□□□□ -0.71
NIF3L1-204ENST00000409357 PGBD4Q96DM1 585 aa10.62□□□□□ -0.71
NIF3L1-204ENST00000409357 AURKBQ96GD4 344 aaPredicted RBP10.62□□□□□ -0.71
NIF3L1-204ENST00000409357 ELMO2Q96JJ3 720 aa10.62□□□□□ -0.71
NIF3L1-204ENST00000409357 GUCD1Q96NT3 240 aa10.62□□□□□ -0.71
NIF3L1-204ENST00000409357 NPAS2Q99743 824 aa10.62□□□□□ -0.71
NIF3L1-204ENST00000409357 LXNQ9BS40 222 aa10.62□□□□□ -0.71
NIF3L1-204ENST00000409357 MKRN2Q9H000 416 aaKnown RBP10.62□□□□□ -0.71
NIF3L1-204ENST00000409357 LHX5Q9H2C1 402 aa10.62□□□□□ -0.71
NIF3L1-204ENST00000409357 MMP27Q9H306 513 aa10.62□□□□□ -0.71
NIF3L1-204ENST00000409357 WDR55Q9H6Y2 383 aaPredicted RBP10.62□□□□□ -0.71
NIF3L1-204ENST00000409357 PCDH12Q9NPG4 1184 aa10.62□□□□□ -0.71
NIF3L1-204ENST00000409357 ATP13A2Q9NQ11 1180 aa10.62□□□□□ -0.71
NIF3L1-204ENST00000409357 KCNH7Q9NS40 1196 aa10.62□□□□□ -0.71
NIF3L1-204ENST00000409357 DTLQ9NZJ0 730 aa10.62□□□□□ -0.71
NIF3L1-204ENST00000409357 WRAP73Q9P2S5 460 aaPredicted RBP10.62□□□□□ -0.71
NIF3L1-204ENST00000409357 SAE1Q9UBE0 346 aaPredicted RBP10.62□□□□□ -0.71
NIF3L1-204ENST00000409357 FBXO5Q9UKT4 447 aa10.62□□□□□ -0.71
NIF3L1-204ENST00000409357 NOD1Q9Y239 953 aa10.62□□□□□ -0.71
NIF3L1-204ENST00000409357 PCDHB4Q9Y5E5 795 aa10.62□□□□□ -0.71
NIF3L1-204ENST00000409357 WDR81Q562E7 1941 aa10.62□□□□□ -0.71
NIF3L1-204ENST00000409357 ZSCAN5BA6NJL1 495 aa10.61□□□□□ -0.71
NIF3L1-204ENST00000409357 CENPXA8MT69 81 aa10.61□□□□□ -0.71
NIF3L1-204ENST00000409357 KATNA1O75449 491 aa10.61□□□□□ -0.71
NIF3L1-204ENST00000409357 CCNKO75909 580 aa10.61□□□□□ -0.71
NIF3L1-204ENST00000409357 SRP72O76094 671 aaKnown RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms