RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 FKBP9O95302 570 aa8.31□□□□□ -1.08
SNX13-201ENST00000409076 ESRRBO95718 433 aa8.31□□□□□ -1.08
SNX13-201ENST00000409076 MAGEA10P43363 369 aaPredicted RBP8.31□□□□□ -1.08
SNX13-201ENST00000409076 KPNA2P52292 529 aaKnown RBP8.31□□□□□ -1.08
SNX13-201ENST00000409076 NKX2-5P52952 324 aaPredicted RBP8.31□□□□□ -1.08
SNX13-201ENST00000409076 VAC14Q08AM6 782 aa8.31□□□□□ -1.08
SNX13-201ENST00000409076 TRIM16LQ309B1 348 aa8.31□□□□□ -1.08
SNX13-201ENST00000409076 CYP27C1Q4G0S4 372 aa8.31□□□□□ -1.08
SNX13-201ENST00000409076 EGFLAMQ63HQ2 1017 aa8.31□□□□□ -1.08
SNX13-201ENST00000409076 NEK10Q6ZWH5 1172 aa8.31□□□□□ -1.08
SNX13-201ENST00000409076 FKBP9P1Q75LS8 142 aa8.31□□□□□ -1.08
SNX13-201ENST00000409076 CATSPER1Q8NEC5 780 aa8.31□□□□□ -1.08
SNX13-201ENST00000409076 ZMIZ2Q8NF64 920 aa8.31□□□□□ -1.08
SNX13-201ENST00000409076 FEM1AQ9BSK4 669 aa8.31□□□□□ -1.08
SNX13-201ENST00000409076 OSBPL11Q9BXB4 747 aa8.31□□□□□ -1.08
SNX13-201ENST00000409076 FBXW11Q9UKB1 542 aa8.31□□□□□ -1.08
SNX13-201ENST00000409076 TCAF1Q9Y4C2 921 aa8.31□□□□□ -1.08
SNX13-201ENST00000409076 A0A0C4DFX4 3053 aa8.31□□□□□ -1.08
SNX13-201ENST00000409076 PNMA8CA0A1B0GUJ8 204 aa8.31□□□□□ -1.08
SNX13-201ENST00000409076 TMEM247A6NEH6 219 aa8.31□□□□□ -1.08
SNX13-201ENST00000409076 AZIN1O14977 448 aa8.31□□□□□ -1.08
SNX13-201ENST00000409076 DCLK1O15075 740 aa8.31□□□□□ -1.08
SNX13-201ENST00000409076 XPNPEP2O43895 674 aa8.31□□□□□ -1.08
SNX13-201ENST00000409076 CLASP2O75122 1294 aaKnown RBP8.31□□□□□ -1.08
SNX13-201ENST00000409076 ATE1O95260 518 aa8.31□□□□□ -1.08
SNX13-201ENST00000409076 H6PDO95479 791 aa8.31□□□□□ -1.08
SNX13-201ENST00000409076 CHEK2O96017 543 aa8.31□□□□□ -1.08
SNX13-201ENST00000409076 B3GALT4O96024 378 aa8.31□□□□□ -1.08
SNX13-201ENST00000409076 SBK3P0C264 359 aa8.31□□□□□ -1.08
SNX13-201ENST00000409076 UGT1A1P22309 533 aa8.31□□□□□ -1.08
SNX13-201ENST00000409076 UGT1A4P22310 534 aa8.31□□□□□ -1.08
SNX13-201ENST00000409076 UGT1A3P35503 534 aa8.31□□□□□ -1.08
SNX13-201ENST00000409076 UGT1A5P35504 534 aa8.31□□□□□ -1.08
SNX13-201ENST00000409076 POLR2IP36954 125 aaKnown RBP8.31□□□□□ -1.08
SNX13-201ENST00000409076 SH3BP2P78314 561 aa8.31□□□□□ -1.08
SNX13-201ENST00000409076 PMS2P3Q13401 168 aa8.31□□□□□ -1.08
SNX13-201ENST00000409076 TAZQ16635 292 aa8.31□□□□□ -1.08
SNX13-201ENST00000409076 SAMD4BQ5PRF9 694 aaKnown RBP8.31□□□□□ -1.08
SNX13-201ENST00000409076 TSTD2Q5T7W7 516 aa8.31□□□□□ -1.08
SNX13-201ENST00000409076 OTUD1Q5VV17 481 aaPredicted RBP8.31□□□□□ -1.08
SNX13-201ENST00000409076 UGT3A1Q6NUS8 523 aa8.31□□□□□ -1.08
SNX13-201ENST00000409076 LRRTM3Q86VH5 581 aa8.31□□□□□ -1.08
SNX13-201ENST00000409076 CACUL1Q86Y37 369 aa8.31□□□□□ -1.08
SNX13-201ENST00000409076 LGI2Q8N0V4 545 aa8.31□□□□□ -1.08
SNX13-201ENST00000409076 CLDN19Q8N6F1 224 aa8.31□□□□□ -1.08
SNX13-201ENST00000409076 PTERQ96BW5 349 aa8.31□□□□□ -1.08
SNX13-201ENST00000409076 ZNF419Q96HQ0 510 aaPredicted RBP8.31□□□□□ -1.08
SNX13-201ENST00000409076 TEX37Q96LM6 180 aa8.31□□□□□ -1.08
SNX13-201ENST00000409076 ADAM2Q99965 735 aa8.31□□□□□ -1.08
SNX13-201ENST00000409076 MRPL57Q9BQC6 102 aaKnown RBP8.31□□□□□ -1.08
SNX13-201ENST00000409076 SLC25A23Q9BV35 468 aa8.31□□□□□ -1.08
SNX13-201ENST00000409076 MUC3BQ9H195 1237 aa8.31□□□□□ -1.08
SNX13-201ENST00000409076 C1orf21Q9H246 121 aa8.31□□□□□ -1.08
SNX13-201ENST00000409076 CLK4Q9HAZ1 481 aaKnown RBP8.31□□□□□ -1.08
SNX13-201ENST00000409076 NMUR1Q9HB89 426 aa8.31□□□□□ -1.08
SNX13-201ENST00000409076 SPC25Q9HBM1 224 aa8.31□□□□□ -1.08
SNX13-201ENST00000409076 GMIPQ9P107 970 aa8.31□□□□□ -1.08
SNX13-201ENST00000409076 KLQ9UEF7 1012 aa8.31□□□□□ -1.08
SNX13-201ENST00000409076 TMA7Q9Y2S6 64 aaKnown RBP8.31□□□□□ -1.08
SNX13-201ENST00000409076 TSC22D4Q9Y3Q8 395 aa8.31□□□□□ -1.08
SNX13-201ENST00000409076 PKP3Q9Y446 797 aa8.31□□□□□ -1.08
SNX13-201ENST00000409076 IGKV6-21A0A0C4DH24 114 aa8.31□□□□□ -1.08
SNX13-201ENST00000409076 C17orf102A2RUQ5 167 aa8.31□□□□□ -1.08
SNX13-201ENST00000409076 CCDC162PA2VCL2 907 aa8.31□□□□□ -1.08
SNX13-201ENST00000409076 H0Y858 1186 aa8.31□□□□□ -1.08
SNX13-201ENST00000409076 UBFD1O14562 309 aaKnown RBP8.31□□□□□ -1.08
SNX13-201ENST00000409076 CPSF4O95639 269 aaKnown RBP8.31□□□□□ -1.08
SNX13-201ENST00000409076 SNAI1O95863 264 aaPredicted RBP8.31□□□□□ -1.08
SNX13-201ENST00000409076 ALDOCP09972 364 aaKnown RBP8.31□□□□□ -1.08
SNX13-201ENST00000409076 RPS12P25398 132 aaKnown RBP8.31□□□□□ -1.08
SNX13-201ENST00000409076 ZNF280AP59817 542 aaPredicted RBP8.31□□□□□ -1.08
SNX13-201ENST00000409076 FRG1Q14331 258 aaKnown RBP8.31□□□□□ -1.08
SNX13-201ENST00000409076 MAPRE2Q15555 327 aa8.31□□□□□ -1.08
SNX13-201ENST00000409076 CPSF6Q16630 551 aaKnown RBP eCLIP8.31□□□□□ -1.08
SNX13-201ENST00000409076 MEP1AQ16819 746 aa8.31□□□□□ -1.08
SNX13-201ENST00000409076 MARCH8Q5T0T0 291 aa8.31□□□□□ -1.08
SNX13-201ENST00000409076 POTEHQ6S545 545 aa8.31□□□□□ -1.08
SNX13-201ENST00000409076 GPR142Q7Z601 462 aa8.31□□□□□ -1.08
SNX13-201ENST00000409076 RASAL3Q86YV0 1011 aa8.31□□□□□ -1.08
SNX13-201ENST00000409076 FIBCD1Q8N539 461 aa8.31□□□□□ -1.08
SNX13-201ENST00000409076 ADCY4Q8NFM4 1077 aa8.31□□□□□ -1.08
SNX13-201ENST00000409076 ZC3H15Q8WU90 426 aaKnown RBP8.31□□□□□ -1.08
SNX13-201ENST00000409076 FBXO32Q969P5 355 aa8.31□□□□□ -1.08
SNX13-201ENST00000409076 TCF12Q99081 682 aa8.31□□□□□ -1.08
SNX13-201ENST00000409076 GPR22Q99680 433 aa8.31□□□□□ -1.08
SNX13-201ENST00000409076 TINF2Q9BSI4 451 aa8.31□□□□□ -1.08
SNX13-201ENST00000409076 UTS2RQ9UKP6 389 aa8.31□□□□□ -1.08
SNX13-201ENST00000409076 ZNF451Q9Y4E5 1061 aa8.31□□□□□ -1.08
SNX13-201ENST00000409076 COL11A2P13942 1736 aaPredicted RBP8.31□□□□□ -1.08
SNX13-201ENST00000409076 COL24A1Q17RW2 1714 aa8.31□□□□□ -1.08
SNX13-201ENST00000409076 NRCAMQ92823 1304 aa8.3□□□□□ -1.08
SNX13-201ENST00000409076 LOC100506127A0A0U1RQW1 187 aa8.3□□□□□ -1.08
SNX13-201ENST00000409076 SMIM30A4D0T7 59 aa8.3□□□□□ -1.08
SNX13-201ENST00000409076 TMEM114B3SHH9 223 aa8.3□□□□□ -1.08
SNX13-201ENST00000409076 BTBD19C9JJ37 291 aa8.3□□□□□ -1.08
SNX13-201ENST00000409076 E9PAM4 449 aa8.3□□□□□ -1.08
SNX13-201ENST00000409076 ARPC2O15144 300 aa8.3□□□□□ -1.08
SNX13-201ENST00000409076 BCAS2O75934 225 aaPredicted RBP8.3□□□□□ -1.08
SNX13-201ENST00000409076 BMP1P13497 986 aa8.3□□□□□ -1.08
SNX13-201ENST00000409076 CDH2P19022 906 aaPredicted RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms