RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 MYF5P13349 255 aa9.05□□□□□ -0.96
SNORD88A-201ENST00000408314 GM2AP17900 193 aa9.05□□□□□ -0.96
SNORD88A-201ENST00000408314 CCKBRP32239 447 aa9.05□□□□□ -0.96
SNORD88A-201ENST00000408314 CETN2P41208 172 aa9.05□□□□□ -0.96
SNORD88A-201ENST00000408314 CD86P42081 329 aa9.05□□□□□ -0.96
SNORD88A-201ENST00000408314 GNPDA1P46926 289 aa9.05□□□□□ -0.96
SNORD88A-201ENST00000408314 STC1P52823 247 aa9.05□□□□□ -0.96
SNORD88A-201ENST00000408314 TBX2Q13207 712 aaPredicted RBP9.05□□□□□ -0.96
SNORD88A-201ENST00000408314 HLTFQ14527 1009 aaKnown RBP eCLIP9.05□□□□□ -0.96
SNORD88A-201ENST00000408314 PERM1Q5SV97 790 aa9.05□□□□□ -0.96
SNORD88A-201ENST00000408314 PDPK2PQ6A1A2 396 aa9.05□□□□□ -0.96
SNORD88A-201ENST00000408314 CRTC1Q6UUV9 634 aa9.05□□□□□ -0.96
SNORD88A-201ENST00000408314 NT5DC3Q86UY8 548 aa9.05□□□□□ -0.96
SNORD88A-201ENST00000408314 GALNT13Q8IUC8 556 aa9.05□□□□□ -0.96
SNORD88A-201ENST00000408314 CCNJLQ8IV13 435 aa9.05□□□□□ -0.96
SNORD88A-201ENST00000408314 PLD5Q8N7P1 536 aa9.05□□□□□ -0.96
SNORD88A-201ENST00000408314 ARRDC2Q8TBH0 407 aa9.05□□□□□ -0.96
SNORD88A-201ENST00000408314 GPBAR1Q8TDU6 330 aa9.05□□□□□ -0.96
SNORD88A-201ENST00000408314 ZDHHC1Q8WTX9 485 aa9.05□□□□□ -0.96
SNORD88A-201ENST00000408314 KCNE4Q8WWG9 221 aa9.05□□□□□ -0.96
SNORD88A-201ENST00000408314 ATXN7L3BQ96GX2 97 aa9.05□□□□□ -0.96
SNORD88A-201ENST00000408314 HIC2Q96JB3 615 aa9.05□□□□□ -0.96
SNORD88A-201ENST00000408314 OLFM3Q96PB7 478 aa9.05□□□□□ -0.96
SNORD88A-201ENST00000408314 UBL7Q96S82 380 aaPredicted RBP9.05□□□□□ -0.96
SNORD88A-201ENST00000408314 VAT1Q99536 393 aa9.05□□□□□ -0.96
SNORD88A-201ENST00000408314 DPYSL5Q9BPU6 564 aa9.05□□□□□ -0.96
SNORD88A-201ENST00000408314 MLPHQ9BV36 600 aaPredicted RBP9.05□□□□□ -0.96
SNORD88A-201ENST00000408314 DPH1Q9BZG8 443 aa9.05□□□□□ -0.96
SNORD88A-201ENST00000408314 TMEM168Q9H0V1 697 aa9.05□□□□□ -0.96
SNORD88A-201ENST00000408314 SLC25A51Q9H1U9 297 aa9.05□□□□□ -0.96
SNORD88A-201ENST00000408314 ABCG8Q9H221 673 aa9.05□□□□□ -0.96
SNORD88A-201ENST00000408314 LRRN3Q9H3W5 708 aa9.05□□□□□ -0.96
SNORD88A-201ENST00000408314 RMI1Q9H9A7 625 aa9.05□□□□□ -0.96
SNORD88A-201ENST00000408314 MRPL40Q9NQ50 206 aaKnown RBP9.05□□□□□ -0.96
SNORD88A-201ENST00000408314 SATB2Q9UPW6 733 aa9.05□□□□□ -0.96
SNORD88A-201ENST00000408314 CHKBQ9Y259 395 aa9.05□□□□□ -0.96
SNORD88A-201ENST00000408314 ENTPD2Q9Y5L3 495 aa9.05□□□□□ -0.96
SNORD88A-201ENST00000408314 CACNA1GO43497 2377 aa9.05□□□□□ -0.96
SNORD88A-201ENST00000408314 KCNK1O00180 336 aa9.04□□□□□ -0.96
SNORD88A-201ENST00000408314 PLD2O14939 933 aa9.04□□□□□ -0.96
SNORD88A-201ENST00000408314 TLX3O43711 291 aaPredicted RBP9.04□□□□□ -0.96
SNORD88A-201ENST00000408314 NOBOXO60393 691 aa9.04□□□□□ -0.96
SNORD88A-201ENST00000408314 MAP3K6O95382 1288 aa9.04□□□□□ -0.96
SNORD88A-201ENST00000408314 LCA5LO95447 670 aa9.04□□□□□ -0.96
SNORD88A-201ENST00000408314 ASMTLO95671 621 aa9.04□□□□□ -0.96
SNORD88A-201ENST00000408314 CEACAM5P06731 702 aa9.04□□□□□ -0.96
SNORD88A-201ENST00000408314 PDHA1P08559 390 aa9.04□□□□□ -0.96
SNORD88A-201ENST00000408314 TNNT1P13805 278 aa9.04□□□□□ -0.96
SNORD88A-201ENST00000408314 COMTP21964 271 aa9.04□□□□□ -0.96
SNORD88A-201ENST00000408314 GPR3P46089 330 aa9.04□□□□□ -0.96
SNORD88A-201ENST00000408314 INHBCP55103 352 aa9.04□□□□□ -0.96
SNORD88A-201ENST00000408314 TMPRSS3P57727 454 aa9.04□□□□□ -0.96
SNORD88A-201ENST00000408314 DCDC1P59894 354 aa9.04□□□□□ -0.96
SNORD88A-201ENST00000408314 MAP9Q49MG5 647 aa9.04□□□□□ -0.96
SNORD88A-201ENST00000408314 ZNF569Q5MCW4 686 aa9.04□□□□□ -0.96
SNORD88A-201ENST00000408314 ZDHHC20Q5W0Z9 365 aa9.04□□□□□ -0.96
SNORD88A-201ENST00000408314 C11orf63Q6NUN7 778 aa9.04□□□□□ -0.96
SNORD88A-201ENST00000408314 DOK6Q6PKX4 331 aa9.04□□□□□ -0.96
SNORD88A-201ENST00000408314 SPRED1Q7Z699 444 aa9.04□□□□□ -0.96
SNORD88A-201ENST00000408314 TSPAN33Q86UF1 283 aa9.04□□□□□ -0.96
SNORD88A-201ENST00000408314 KATNAL2Q8IYT4 538 aa9.04□□□□□ -0.96
SNORD88A-201ENST00000408314 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.04□□□□□ -0.96
SNORD88A-201ENST00000408314 CCDC112Q8NEF3 446 aa9.04□□□□□ -0.96
SNORD88A-201ENST00000408314 TFB1MQ8WVM0 346 aaKnown RBP9.04□□□□□ -0.96
SNORD88A-201ENST00000408314 P3H4Q92791 437 aa9.04□□□□□ -0.96
SNORD88A-201ENST00000408314 RNF25Q96BH1 459 aaPredicted RBP9.04□□□□□ -0.96
SNORD88A-201ENST00000408314 LRRC45Q96CN5 670 aa9.04□□□□□ -0.96
SNORD88A-201ENST00000408314 SCARF2Q96GP6 870 aaPredicted RBP9.04□□□□□ -0.96
SNORD88A-201ENST00000408314 MRFAP1L1Q96HT8 127 aa9.04□□□□□ -0.96
SNORD88A-201ENST00000408314 NSMCE3Q96MG7 304 aa9.04□□□□□ -0.96
SNORD88A-201ENST00000408314 PANX2Q96RD6 677 aa9.04□□□□□ -0.96
SNORD88A-201ENST00000408314 ZSCAN5AQ9BUG6 496 aa9.04□□□□□ -0.96
SNORD88A-201ENST00000408314 LGR4Q9BXB1 951 aa9.04□□□□□ -0.96
SNORD88A-201ENST00000408314 FAM83DQ9H4H8 585 aa9.04□□□□□ -0.96
SNORD88A-201ENST00000408314 EPB41L5Q9HCM4 733 aa9.04□□□□□ -0.96
SNORD88A-201ENST00000408314 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.04□□□□□ -0.96
SNORD88A-201ENST00000408314 SEPT10Q9P0V9 454 aa9.04□□□□□ -0.96
SNORD88A-201ENST00000408314 LRIT1Q9P2V4 623 aa9.04□□□□□ -0.96
SNORD88A-201ENST00000408314 NFKBIL1Q9UBC1 381 aaPredicted RBP9.04□□□□□ -0.96
SNORD88A-201ENST00000408314 SUFUQ9UMX1 484 aa9.04□□□□□ -0.96
SNORD88A-201ENST00000408314 SPEGQ15772 3267 aa9.04□□□□□ -0.96
SNORD88A-201ENST00000408314 ITPR1Q14643 2758 aa9.03□□□□□ -0.96
SNORD88A-201ENST00000408314 ASXL3Q9C0F0 2248 aa9.03□□□□□ -0.96
SNORD88A-201ENST00000408314 TEX51A0A1B0GUA7 166 aa9.03□□□□□ -0.96
SNORD88A-201ENST00000408314 C3orf70A6NLC5 250 aaPredicted RBP9.03□□□□□ -0.96
SNORD88A-201ENST00000408314 GOLGA6L6A8MZA4 724 aa9.03□□□□□ -0.96
SNORD88A-201ENST00000408314 HACD1B0YJ81 288 aa9.03□□□□□ -0.96
SNORD88A-201ENST00000408314 ZRANB2O95218 330 aaKnown RBP eCLIP9.03□□□□□ -0.96not detected■■□□□ 11.9
SNORD88A-201ENST00000408314 CPNE6O95741 557 aa9.03□□□□□ -0.96
SNORD88A-201ENST00000408314 NDST3O95803 873 aa9.03□□□□□ -0.96
SNORD88A-201ENST00000408314 JMJD7P0C870 316 aa9.03□□□□□ -0.96
SNORD88A-201ENST00000408314 ADCY8P40145 1251 aa9.03□□□□□ -0.96
SNORD88A-201ENST00000408314 ACTR1BP42025 376 aa9.03□□□□□ -0.96
SNORD88A-201ENST00000408314 SPINT3P49223 89 aa9.03□□□□□ -0.96
SNORD88A-201ENST00000408314 ACTR1AP61163 376 aa9.03□□□□□ -0.96
SNORD88A-201ENST00000408314 COPS2P61201 443 aa9.03□□□□□ -0.96
SNORD88A-201ENST00000408314 DYNLT1P63172 113 aa9.03□□□□□ -0.96
SNORD88A-201ENST00000408314 CCL7P80098 99 aa9.03□□□□□ -0.96
SNORD88A-201ENST00000408314 CTBSQ01459 385 aa9.03□□□□□ -0.96
SNORD88A-201ENST00000408314 PTSQ03393 145 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms