RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 CDT1Q9H211 546 aa5.01□□□□□ -1.61
HMGB1P13-201ENST00000406019 ST6GALNAC4Q9H4F1 302 aa5.01□□□□□ -1.61
HMGB1P13-201ENST00000406019 OPA3Q9H6K4 179 aa5.01□□□□□ -1.61
HMGB1P13-201ENST00000406019 MVB12BQ9H7P6 319 aa5.01□□□□□ -1.61
HMGB1P13-201ENST00000406019 BPIFA1Q9NP55 256 aa5.01□□□□□ -1.61
HMGB1P13-201ENST00000406019 SPAG4Q9NPE6 437 aa5.01□□□□□ -1.61
HMGB1P13-201ENST00000406019 DDX4Q9NQI0 724 aaKnown RBP5.01□□□□□ -1.61
HMGB1P13-201ENST00000406019 PAPOLBQ9NRJ5 636 aaKnown RBP5.01□□□□□ -1.61
HMGB1P13-201ENST00000406019 RNF146Q9NTX7 359 aa5.01□□□□□ -1.61
HMGB1P13-201ENST00000406019 PAG1Q9NWQ8 432 aa5.01□□□□□ -1.61
HMGB1P13-201ENST00000406019 MSRB1Q9NZV6 116 aa5.01□□□□□ -1.61
HMGB1P13-201ENST00000406019 PLEKHB1Q9UF11 243 aaPredicted RBP5.01□□□□□ -1.61
HMGB1P13-201ENST00000406019 GTF3C4Q9UKN8 822 aa5.01□□□□□ -1.61
HMGB1P13-201ENST00000406019 PCDHA12Q9UN75 941 aa5.01□□□□□ -1.61
HMGB1P13-201ENST00000406019 PPIEQ9UNP9 301 aaKnown RBP5.01□□□□□ -1.61
HMGB1P13-201ENST00000406019 LAMP3Q9UQV4 416 aa5.01□□□□□ -1.61
HMGB1P13-201ENST00000406019 MAU2Q9Y6X3 613 aa5.01□□□□□ -1.61
HMGB1P13-201ENST00000406019 TRBC2A0A5B9 178 aa5□□□□□ -1.61
HMGB1P13-201ENST00000406019 LNP1A1A4G5 178 aa5□□□□□ -1.61
HMGB1P13-201ENST00000406019 TYW5A2RUC4 315 aaKnown RBP5□□□□□ -1.61
HMGB1P13-201ENST00000406019 LRRC72A6NJI9 287 aa5□□□□□ -1.61
HMGB1P13-201ENST00000406019 CLGNO14967 610 aa5□□□□□ -1.61
HMGB1P13-201ENST00000406019 SLC7A4O43246 635 aa5□□□□□ -1.61
HMGB1P13-201ENST00000406019 BMP15O95972 392 aa5□□□□□ -1.61
HMGB1P13-201ENST00000406019 TPOP07202 933 aa5□□□□□ -1.61
HMGB1P13-201ENST00000406019 CCDC175P0C221 793 aa5□□□□□ -1.61
HMGB1P13-201ENST00000406019 TMEM191BP0C7N4 346 aa5□□□□□ -1.61
HMGB1P13-201ENST00000406019 ETFAP13804 333 aa5□□□□□ -1.61
HMGB1P13-201ENST00000406019 TNNT3P45378 269 aaPredicted RBP5□□□□□ -1.61
HMGB1P13-201ENST00000406019 CLCN5P51795 746 aa5□□□□□ -1.61
HMGB1P13-201ENST00000406019 FOXG1P55316 489 aaPredicted RBP5□□□□□ -1.61
HMGB1P13-201ENST00000406019 SOWAHAQ2M3V2 549 aa5□□□□□ -1.61
HMGB1P13-201ENST00000406019 ESCO2Q56NI9 601 aa5□□□□□ -1.61
HMGB1P13-201ENST00000406019 EPHA10Q5JZY3 1008 aa5□□□□□ -1.61
HMGB1P13-201ENST00000406019 TTC39AQ5SRH9 613 aa5□□□□□ -1.61
HMGB1P13-201ENST00000406019 LRIF1Q5T3J3 769 aa5□□□□□ -1.61
HMGB1P13-201ENST00000406019 HIST2H2BCQ6DN03 193 aa5□□□□□ -1.61
HMGB1P13-201ENST00000406019 HIST2H2BDQ6DRA6 164 aa5□□□□□ -1.61
HMGB1P13-201ENST00000406019 FBXO46Q6PJ61 603 aaPredicted RBP5□□□□□ -1.61
HMGB1P13-201ENST00000406019 RBPMS2Q6ZRY4 209 aaKnown RBP5□□□□□ -1.61
HMGB1P13-201ENST00000406019 MFSD6Q6ZSS7 791 aa5□□□□□ -1.61
HMGB1P13-201ENST00000406019 GLRX5Q86SX6 157 aa5□□□□□ -1.61
HMGB1P13-201ENST00000406019 DENND6AQ8IWF6 608 aa5□□□□□ -1.61
HMGB1P13-201ENST00000406019 WDR63Q8IWG1 891 aa5□□□□□ -1.61
HMGB1P13-201ENST00000406019 MCEMP1Q8IX19 187 aa5□□□□□ -1.61
HMGB1P13-201ENST00000406019 DDIASQ8IXT1 998 aa5□□□□□ -1.61
HMGB1P13-201ENST00000406019 ZNF713Q8N859 430 aaPredicted RBP5□□□□□ -1.61
HMGB1P13-201ENST00000406019 OR6J1Q8NGC5 347 aa5□□□□□ -1.61
HMGB1P13-201ENST00000406019 OR14L1PQ8NHC6 308 aa5□□□□□ -1.61
HMGB1P13-201ENST00000406019 TRPC4APQ8TEL6 797 aa5□□□□□ -1.61
HMGB1P13-201ENST00000406019 IGSF8Q969P0 613 aa5□□□□□ -1.61
HMGB1P13-201ENST00000406019 ZC3HAV1LQ96H79 300 aaKnown RBP5□□□□□ -1.61
HMGB1P13-201ENST00000406019 CFAP57Q96MR6 1250 aa5□□□□□ -1.61
HMGB1P13-201ENST00000406019 CCDC106Q9BWC9 280 aa5□□□□□ -1.61
HMGB1P13-201ENST00000406019 GRPEL1Q9HAV7 217 aa5□□□□□ -1.61
HMGB1P13-201ENST00000406019 ANKRD10Q9NXR5 420 aa5□□□□□ -1.61
HMGB1P13-201ENST00000406019 GDE1Q9NZC3 331 aa5□□□□□ -1.61
HMGB1P13-201ENST00000406019 CRNNQ9UBG3 495 aaPredicted RBP5□□□□□ -1.61
HMGB1P13-201ENST00000406019 OSGIN1Q9UJX0 560 aa5□□□□□ -1.61
HMGB1P13-201ENST00000406019 WBP11Q9Y2W2 641 aaKnown RBP5□□□□□ -1.61
HMGB1P13-201ENST00000406019 GPR75-ASB3A0A0A6YYF3 556 aa4.99□□□□□ -1.61
HMGB1P13-201ENST00000406019 KIR2DS5A0A0G2JLQ3 304 aa4.99□□□□□ -1.61
HMGB1P13-201ENST00000406019 F8W810 466 aa4.99□□□□□ -1.61
HMGB1P13-201ENST00000406019 KIR2DS3K7RE56 304 aa4.99□□□□□ -1.61
HMGB1P13-201ENST00000406019 RHODO00212 210 aa4.99□□□□□ -1.61
HMGB1P13-201ENST00000406019 CHL1O00533 1208 aa4.99□□□□□ -1.61
HMGB1P13-201ENST00000406019 HSPB6O14558 160 aa4.99□□□□□ -1.61
HMGB1P13-201ENST00000406019 JRKO75564 520 aa4.99□□□□□ -1.61
HMGB1P13-201ENST00000406019 EPN2O95208 641 aa4.99□□□□□ -1.61
HMGB1P13-201ENST00000406019 FYNP06241 537 aa4.99□□□□□ -1.61
HMGB1P13-201ENST00000406019 MMP2P08253 660 aa4.99□□□□□ -1.61
HMGB1P13-201ENST00000406019 MMP9P14780 707 aa4.99□□□□□ -1.61
HMGB1P13-201ENST00000406019 TAS2R40P59535 323 aa4.99□□□□□ -1.61
HMGB1P13-201ENST00000406019 PLIN5Q00G26 463 aa4.99□□□□□ -1.61
HMGB1P13-201ENST00000406019 IL11RAQ14626 422 aa4.99□□□□□ -1.61
HMGB1P13-201ENST00000406019 ALG10Q5BKT4 473 aa4.99□□□□□ -1.61
HMGB1P13-201ENST00000406019 ALG10BQ5I7T1 473 aa4.99□□□□□ -1.61
HMGB1P13-201ENST00000406019 KRBOX4Q5JUW0 171 aa4.99□□□□□ -1.61
HMGB1P13-201ENST00000406019 ENTPD8Q5MY95 495 aa4.99□□□□□ -1.61
HMGB1P13-201ENST00000406019 PRAMEF19Q5SWL8 479 aa4.99□□□□□ -1.61
HMGB1P13-201ENST00000406019 NCAPH2Q6IBW4 605 aa4.99□□□□□ -1.61
HMGB1P13-201ENST00000406019 LINGO2Q7L985 606 aa4.99□□□□□ -1.61
HMGB1P13-201ENST00000406019 HAPLN4Q86UW8 402 aa4.99□□□□□ -1.61
HMGB1P13-201ENST00000406019 CCDC13Q8IYE1 715 aa4.99□□□□□ -1.61
HMGB1P13-201ENST00000406019 FAM185AQ8N0U4 392 aa4.99□□□□□ -1.61
HMGB1P13-201ENST00000406019 SLC25A41Q8N5S1 370 aa4.99□□□□□ -1.61
HMGB1P13-201ENST00000406019 ZBTB2Q8N680 514 aa4.99□□□□□ -1.61
HMGB1P13-201ENST00000406019 XXYLT1Q8NBI6 393 aa4.99□□□□□ -1.61
HMGB1P13-201ENST00000406019 BEST2Q8NFU1 509 aa4.99□□□□□ -1.61
HMGB1P13-201ENST00000406019 RRNAD1Q96FB5 475 aaKnown RBP4.99□□□□□ -1.61
HMGB1P13-201ENST00000406019 FER1L6-AS2Q96M78 137 aa4.99□□□□□ -1.61
HMGB1P13-201ENST00000406019 DESI2Q9BSY9 194 aa4.99□□□□□ -1.61
HMGB1P13-201ENST00000406019 FOXP1Q9H334 677 aaPredicted RBP4.99□□□□□ -1.61
HMGB1P13-201ENST00000406019 XAB2Q9HCS7 855 aaKnown RBP4.99□□□□□ -1.61
HMGB1P13-201ENST00000406019 PNRC2Q9NPJ4 139 aaKnown RBP4.99□□□□□ -1.61
HMGB1P13-201ENST00000406019 CWC15Q9P013 229 aaKnown RBP4.99□□□□□ -1.61
HMGB1P13-201ENST00000406019 AMACRQ9UHK6 382 aa4.99□□□□□ -1.61
HMGB1P13-201ENST00000406019 UTS2RQ9UKP6 389 aa4.99□□□□□ -1.61
HMGB1P13-201ENST00000406019 HS3ST3B1Q9Y662 390 aa4.99□□□□□ -1.61
HMGB1P13-201ENST00000406019 ZFP37Q9Y6Q3 630 aaPredicted RBP4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms