RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 INTS10Q9NVR2 710 aaKnown RBP20.97■□□□□ 0.95
TPM1-208ENST00000404484 IL17CQ9P0M4 197 aa20.97■□□□□ 0.95
TPM1-208ENST00000404484 DCDC2Q9UHG0 476 aa20.97■□□□□ 0.95
TPM1-208ENST00000404484 WASF2Q9Y6W5 498 aa20.97■□□□□ 0.95
TPM1-208ENST00000404484 TSPAN11A1L157 253 aa20.97■□□□□ 0.95
TPM1-208ENST00000404484 CCL22O00626 93 aa20.97■□□□□ 0.95
TPM1-208ENST00000404484 GSTA1P08263 222 aa20.97■□□□□ 0.95
TPM1-208ENST00000404484 GABRB3P28472 473 aa20.97■□□□□ 0.95
TPM1-208ENST00000404484 PMLP29590 882 aa20.97■□□□□ 0.95
TPM1-208ENST00000404484 HNF1BP35680 557 aa20.97■□□□□ 0.95
TPM1-208ENST00000404484 NUBP1P53384 320 aa20.97■□□□□ 0.95
TPM1-208ENST00000404484 PTPRCAPQ14761 206 aa20.97■□□□□ 0.95
TPM1-208ENST00000404484 HNRNPA1L2Q32P51 320 aaKnown RBP20.97■□□□□ 0.95
TPM1-208ENST00000404484 TAF1BQ53T94 588 aaPredicted RBP20.97■□□□□ 0.95
TPM1-208ENST00000404484 LCA5Q86VQ0 697 aa20.97■□□□□ 0.95
TPM1-208ENST00000404484 DTWD2Q8NBA8 298 aa20.97■□□□□ 0.95
TPM1-208ENST00000404484 PRSS33Q8NF86 280 aa20.97■□□□□ 0.95
TPM1-208ENST00000404484 GRIN3AQ8TCU5 1115 aa20.97■□□□□ 0.95
TPM1-208ENST00000404484 CKAP2Q8WWK9 683 aa20.97■□□□□ 0.95
TPM1-208ENST00000404484 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.97■□□□□ 0.95
TPM1-208ENST00000404484 VOPP1Q96AW1 172 aa20.97■□□□□ 0.95
TPM1-208ENST00000404484 CLDN23Q96B33 292 aa20.97■□□□□ 0.95
TPM1-208ENST00000404484 KLHL32Q96NJ5 620 aa20.97■□□□□ 0.95
TPM1-208ENST00000404484 PAIP2Q9BPZ3 127 aaKnown RBP20.97■□□□□ 0.95
TPM1-208ENST00000404484 SLC13A1Q9BZW2 595 aa20.97■□□□□ 0.95
TPM1-208ENST00000404484 KCNH6Q9H252 994 aa20.97■□□□□ 0.95
TPM1-208ENST00000404484 SUDS3Q9H7L9 328 aaPredicted RBP20.97■□□□□ 0.95
TPM1-208ENST00000404484 FBXO6Q9NRD1 293 aaPredicted RBP20.97■□□□□ 0.95
TPM1-208ENST00000404484 DKK3Q9UBP4 350 aa20.97■□□□□ 0.95
TPM1-208ENST00000404484 SLC39A10Q9ULF5 831 aa20.97■□□□□ 0.95
TPM1-208ENST00000404484 GRID1Q9ULK0 1009 aa20.97■□□□□ 0.95
TPM1-208ENST00000404484 FAM95CA0A1B0GW59 222 aa20.96■□□□□ 0.95
TPM1-208ENST00000404484 GALR2O43603 387 aaPredicted RBP20.96■□□□□ 0.95
TPM1-208ENST00000404484 KAT7O95251 611 aa20.96■□□□□ 0.95
TPM1-208ENST00000404484 PRNPP04156 253 aa20.96■□□□□ 0.95
TPM1-208ENST00000404484 PTPN5P54829 565 aa20.96■□□□□ 0.95
TPM1-208ENST00000404484 SLC12A2P55011 1212 aa20.96■□□□□ 0.95
TPM1-208ENST00000404484 WDR4P57081 412 aaKnown RBP20.96■□□□□ 0.95
TPM1-208ENST00000404484 POU4F1Q01851 419 aa20.96■□□□□ 0.95
TPM1-208ENST00000404484 USP10Q14694 798 aaKnown RBP20.96■□□□□ 0.95
TPM1-208ENST00000404484 TYSND1Q2T9J0 566 aa20.96■□□□□ 0.95
TPM1-208ENST00000404484 RNF187Q5TA31 235 aaPredicted RBP20.96■□□□□ 0.95
TPM1-208ENST00000404484 LVRNQ6Q4G3 990 aa20.96■□□□□ 0.95
TPM1-208ENST00000404484 ZSWIM9Q86XI8 627 aa20.96■□□□□ 0.95
TPM1-208ENST00000404484 OR8D1Q8WZ84 308 aa20.96■□□□□ 0.95
TPM1-208ENST00000404484 TSPAN17Q96FV3 270 aa20.96■□□□□ 0.95
TPM1-208ENST00000404484 MSANTD3Q96H12 275 aa20.96■□□□□ 0.95
TPM1-208ENST00000404484 MAGEB18Q96M61 343 aa20.96■□□□□ 0.95
TPM1-208ENST00000404484 SMIM14Q96QK8 99 aa20.96■□□□□ 0.95
TPM1-208ENST00000404484 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.96■□□□□ 0.95
TPM1-208ENST00000404484 TLK1Q9UKI8 766 aa20.96■□□□□ 0.95
TPM1-208ENST00000404484 ANKRD6Q9Y2G4 727 aa20.96■□□□□ 0.95
TPM1-208ENST00000404484 PLLPQ9Y342 182 aa20.96■□□□□ 0.95
TPM1-208ENST00000404484 GMNCA6NCL1 334 aa20.95■□□□□ 0.94
TPM1-208ENST00000404484 OR51F1A6NGY5 319 aa20.95■□□□□ 0.94
TPM1-208ENST00000404484 LEFTY1O75610 366 aa20.95■□□□□ 0.94
TPM1-208ENST00000404484 HAUS5O94927 633 aa20.95■□□□□ 0.94
TPM1-208ENST00000404484 CYP2A6P11509 494 aaPredicted RBP20.95■□□□□ 0.94
TPM1-208ENST00000404484 CRABP2P29373 138 aa20.95■□□□□ 0.94
TPM1-208ENST00000404484 TCF15Q12870 199 aa20.95■□□□□ 0.94
TPM1-208ENST00000404484 PDE1CQ14123 709 aaPredicted RBP20.95■□□□□ 0.94
TPM1-208ENST00000404484 PON2Q15165 354 aa20.95■□□□□ 0.94
TPM1-208ENST00000404484 ZNF805Q5CZA5 627 aa20.95■□□□□ 0.94
TPM1-208ENST00000404484 ARSIQ5FYB1 569 aa20.95■□□□□ 0.94
TPM1-208ENST00000404484 KYAT3Q6YP21 454 aaKnown RBP20.95■□□□□ 0.94
TPM1-208ENST00000404484 CCDC91Q7Z6B0 441 aa20.95■□□□□ 0.94
TPM1-208ENST00000404484 GDAP1Q8TB36 358 aa20.95■□□□□ 0.94
TPM1-208ENST00000404484 TSNARE1Q96NA8 513 aa20.95■□□□□ 0.94
TPM1-208ENST00000404484 PRRX2Q99811 253 aa20.95■□□□□ 0.94
TPM1-208ENST00000404484 MLXIPLQ9NP71 852 aa20.95■□□□□ 0.94
TPM1-208ENST00000404484 MARCH4Q9P2E8 410 aaPredicted RBP20.95■□□□□ 0.94
TPM1-208ENST00000404484 FKBPLQ9UIM3 349 aa20.95■□□□□ 0.94
TPM1-208ENST00000404484 APPL1Q9UKG1 709 aa20.95■□□□□ 0.94
TPM1-208ENST00000404484 NPC1O15118 1278 aa20.94■□□□□ 0.94
TPM1-208ENST00000404484 S1PR4O95977 384 aa20.94■□□□□ 0.94
TPM1-208ENST00000404484 STMN1P16949 149 aa20.94■□□□□ 0.94
TPM1-208ENST00000404484 MC4RP32245 332 aa20.94■□□□□ 0.94
TPM1-208ENST00000404484 ABCG1P45844 678 aa20.94■□□□□ 0.94
TPM1-208ENST00000404484 TTPAP49638 278 aa20.94■□□□□ 0.94
TPM1-208ENST00000404484 STC1P52823 247 aa20.94■□□□□ 0.94
TPM1-208ENST00000404484 MESP2Q0VG99 397 aa20.94■□□□□ 0.94
TPM1-208ENST00000404484 ZNF234Q14588 700 aa20.94■□□□□ 0.94
TPM1-208ENST00000404484 CDKN3Q16667 212 aa20.94■□□□□ 0.94
TPM1-208ENST00000404484 ZDHHC20Q5W0Z9 365 aa20.94■□□□□ 0.94
TPM1-208ENST00000404484 SERPINA13PQ6UXR4 307 aa20.94■□□□□ 0.94
TPM1-208ENST00000404484 RAPH1Q70E73 1250 aa20.94■□□□□ 0.94
TPM1-208ENST00000404484 GPATCH11Q8N954 259 aa20.94■□□□□ 0.94
TPM1-208ENST00000404484 CHMP6Q96FZ7 201 aa20.94■□□□□ 0.94
TPM1-208ENST00000404484 ELMO2Q96JJ3 720 aa20.94■□□□□ 0.94
TPM1-208ENST00000404484 FAM111AQ96PZ2 611 aa20.94■□□□□ 0.94
TPM1-208ENST00000404484 VPS11Q9H270 941 aa20.94■□□□□ 0.94
TPM1-208ENST00000404484 LMAN1LQ9HAT1 526 aa20.94■□□□□ 0.94
TPM1-208ENST00000404484 SUN2Q9UH99 717 aa20.94■□□□□ 0.94
TPM1-208ENST00000404484 SLC30A1Q9Y6M5 507 aa20.94■□□□□ 0.94
TPM1-208ENST00000404484 MUC22E2RYF6 1773 aaPredicted RBP20.94■□□□□ 0.94
TPM1-208ENST00000404484 A0A096LPK6 155 aa20.93■□□□□ 0.94
TPM1-208ENST00000404484 NPIPB15A6NHN6 443 aaPredicted RBP20.93■□□□□ 0.94
TPM1-208ENST00000404484 CHRNB1P11230 501 aa20.93■□□□□ 0.94
TPM1-208ENST00000404484 ZNF30P17039 623 aa20.93■□□□□ 0.94
TPM1-208ENST00000404484 XPAP23025 273 aaPredicted RBP20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms