RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 GLT6D1Q7Z4J2 308 aa12.64□□□□□ -0.39
PPP4R1-202ENST00000400555 ZNF467Q7Z7K2 595 aaPredicted RBP12.64□□□□□ -0.39
PPP4R1-202ENST00000400555 OR10Q1Q8NGQ4 319 aa12.64□□□□□ -0.39
PPP4R1-202ENST00000400555 OR13J1Q8NGT2 312 aa12.64□□□□□ -0.39
PPP4R1-202ENST00000400555 ERLEC1Q96DZ1 483 aa12.64□□□□□ -0.39
PPP4R1-202ENST00000400555 KCTD14Q9BQ13 255 aaPredicted RBP12.64□□□□□ -0.39
PPP4R1-202ENST00000400555 PREBQ9HCU5 417 aa12.64□□□□□ -0.39
PPP4R1-202ENST00000400555 MRPL40Q9NQ50 206 aaKnown RBP12.64□□□□□ -0.39
PPP4R1-202ENST00000400555 OAZ3Q9UMX2 235 aa12.64□□□□□ -0.39
PPP4R1-202ENST00000400555 GSTA4O15217 222 aa12.64□□□□□ -0.39
PPP4R1-202ENST00000400555 S1PR4O95977 384 aa12.64□□□□□ -0.39
PPP4R1-202ENST00000400555 ASGR1P07306 291 aa12.64□□□□□ -0.39
PPP4R1-202ENST00000400555 ALDOCP09972 364 aaKnown RBP12.64□□□□□ -0.39
PPP4R1-202ENST00000400555 FASP25445 335 aa12.64□□□□□ -0.39
PPP4R1-202ENST00000400555 YBX1P67809 324 aaKnown RBP12.64□□□□□ -0.39
PPP4R1-202ENST00000400555 RHDQ02161 417 aa12.64□□□□□ -0.39
PPP4R1-202ENST00000400555 CREB5Q02930 508 aa12.64□□□□□ -0.39
PPP4R1-202ENST00000400555 C16orf72Q14CZ0 275 aa12.64□□□□□ -0.39
PPP4R1-202ENST00000400555 MS4A13Q5J8X5 152 aa12.64□□□□□ -0.39
PPP4R1-202ENST00000400555 RAB41Q5JT25 222 aa12.64□□□□□ -0.39
PPP4R1-202ENST00000400555 ANKS6Q68DC2 871 aa12.64□□□□□ -0.39
PPP4R1-202ENST00000400555 ZNF598Q86UK7 904 aaKnown RBP12.64□□□□□ -0.39
PPP4R1-202ENST00000400555 BBS5Q8N3I7 341 aa12.64□□□□□ -0.39
PPP4R1-202ENST00000400555 CINPQ9BW66 212 aaPredicted RBP12.64□□□□□ -0.39
PPP4R1-202ENST00000400555 POLR1EQ9GZS1 481 aaKnown RBP12.64□□□□□ -0.39
PPP4R1-202ENST00000400555 ZDHHC7Q9NXF8 308 aa12.64□□□□□ -0.39
PPP4R1-202ENST00000400555 LAMA3Q16787 3333 aa12.64□□□□□ -0.39
PPP4R1-202ENST00000400555 OR1I1O60431 355 aa12.63□□□□□ -0.39
PPP4R1-202ENST00000400555 SMIM18P0DKX4 95 aa12.63□□□□□ -0.39
PPP4R1-202ENST00000400555 LBPP18428 481 aa12.63□□□□□ -0.39
PPP4R1-202ENST00000400555 IMPDH1P20839 514 aa12.63□□□□□ -0.39
PPP4R1-202ENST00000400555 NR1H2P55055 460 aa12.63□□□□□ -0.39
PPP4R1-202ENST00000400555 PCBP1Q15365 356 aaKnown RBP eCLIP12.63□□□□□ -0.39
PPP4R1-202ENST00000400555 GPR107Q5VW38 600 aa12.63□□□□□ -0.39
PPP4R1-202ENST00000400555 FAM117BQ6P1L5 589 aa12.63□□□□□ -0.39
PPP4R1-202ENST00000400555 BHLHA9Q7RTU4 235 aa12.63□□□□□ -0.39
PPP4R1-202ENST00000400555 ANKRD23Q86SG2 305 aa12.63□□□□□ -0.39
PPP4R1-202ENST00000400555 DENND1CQ8IV53 801 aa12.63□□□□□ -0.39
PPP4R1-202ENST00000400555 ZC3H15Q8WU90 426 aaKnown RBP12.63□□□□□ -0.39
PPP4R1-202ENST00000400555 HAPLN3Q96S86 360 aa12.63□□□□□ -0.39
PPP4R1-202ENST00000400555 THUMPD3Q9BV44 507 aaKnown RBP12.63□□□□□ -0.39
PPP4R1-202ENST00000400555 MRPS26Q9BYN8 205 aaKnown RBP12.63□□□□□ -0.39
PPP4R1-202ENST00000400555 TM6SF2Q9BZW4 377 aa12.63□□□□□ -0.39
PPP4R1-202ENST00000400555 SLAMF8Q9P0V8 285 aa12.63□□□□□ -0.39
PPP4R1-202ENST00000400555 GTF2IRD1Q9UHL9 959 aa12.63□□□□□ -0.39
PPP4R1-202ENST00000400555 H0Y626 953 aa12.63□□□□□ -0.39
PPP4R1-202ENST00000400555 STX7O15400 261 aaKnown RBP12.63□□□□□ -0.39
PPP4R1-202ENST00000400555 TRIM16O95361 564 aa12.63□□□□□ -0.39
PPP4R1-202ENST00000400555 GATMP50440 423 aa12.63□□□□□ -0.39
PPP4R1-202ENST00000400555 PRKCQQ04759 706 aa12.63□□□□□ -0.39
PPP4R1-202ENST00000400555 ZNF678Q5SXM1 525 aa12.63□□□□□ -0.39
PPP4R1-202ENST00000400555 TMEM214Q6NUQ4 689 aaKnown RBP12.63□□□□□ -0.39
PPP4R1-202ENST00000400555 MON1AQ86VX9 555 aa12.63□□□□□ -0.39
PPP4R1-202ENST00000400555 MARVELD2Q8N4S9 558 aa12.63□□□□□ -0.39
PPP4R1-202ENST00000400555 SIDT2Q8NBJ9 832 aaKnown RBP12.63□□□□□ -0.39
PPP4R1-202ENST00000400555 CLHC1Q8NHS4 586 aa12.63□□□□□ -0.39
PPP4R1-202ENST00000400555 THAP11Q96EK4 314 aa12.63□□□□□ -0.39
PPP4R1-202ENST00000400555 ARHGAP39Q9C0H5 1083 aa12.63□□□□□ -0.39
PPP4R1-202ENST00000400555 ACOT8O14734 319 aa12.63□□□□□ -0.39
PPP4R1-202ENST00000400555 SH3BGRLO75368 114 aa12.63□□□□□ -0.39
PPP4R1-202ENST00000400555 CAPN3P20807 821 aa12.63□□□□□ -0.39
PPP4R1-202ENST00000400555 UFM1P61960 85 aa12.63□□□□□ -0.39
PPP4R1-202ENST00000400555 CLCQ05315 142 aa12.63□□□□□ -0.39
PPP4R1-202ENST00000400555 RAD51Q06609 339 aa12.63□□□□□ -0.39
PPP4R1-202ENST00000400555 LSAMPQ13449 338 aa12.63□□□□□ -0.39
PPP4R1-202ENST00000400555 NR6A1Q15406 480 aa12.63□□□□□ -0.39
PPP4R1-202ENST00000400555 C18orf21Q32NC0 220 aaPredicted RBP12.63□□□□□ -0.39
PPP4R1-202ENST00000400555 DCP1BQ8IZD4 617 aaKnown RBP12.63□□□□□ -0.39
PPP4R1-202ENST00000400555 OR2T34Q8NGX1 318 aa12.63□□□□□ -0.39
PPP4R1-202ENST00000400555 OR2T3Q8NH03 318 aa12.63□□□□□ -0.39
PPP4R1-202ENST00000400555 METTL6Q8TCB7 284 aa12.63□□□□□ -0.39
PPP4R1-202ENST00000400555 PRICKLE1Q96MT3 831 aaPredicted RBP12.63□□□□□ -0.39
PPP4R1-202ENST00000400555 TRIM62Q9BVG3 475 aa12.63□□□□□ -0.39
PPP4R1-202ENST00000400555 GSTO2Q9H4Y5 243 aa12.63□□□□□ -0.39
PPP4R1-202ENST00000400555 ZFP14Q9HCL3 533 aa12.63□□□□□ -0.39
PPP4R1-202ENST00000400555 GKN1Q9NS71 199 aa12.63□□□□□ -0.39
PPP4R1-202ENST00000400555 GID8Q9NWU2 228 aa12.63□□□□□ -0.39
PPP4R1-202ENST00000400555 GALNT8Q9NY28 637 aa12.63□□□□□ -0.39
PPP4R1-202ENST00000400555 TAS2R13Q9NYV9 303 aa12.63□□□□□ -0.39
PPP4R1-202ENST00000400555 ZNHIT2Q9UHR6 403 aa12.63□□□□□ -0.39
PPP4R1-202ENST00000400555 EIF2B4Q9UI10 523 aaKnown RBP12.63□□□□□ -0.39
PPP4R1-202ENST00000400555 TRMT6Q9UJA5 497 aaKnown RBP12.63□□□□□ -0.39
PPP4R1-202ENST00000400555 PAPPA2Q9BXP8 1791 aa12.63□□□□□ -0.39
PPP4R1-202ENST00000400555 F5H5T6 163 aa12.63□□□□□ -0.39
PPP4R1-202ENST00000400555 TLR5O60602 858 aa12.63□□□□□ -0.39
PPP4R1-202ENST00000400555 KPNA6O60684 536 aa12.63□□□□□ -0.39
PPP4R1-202ENST00000400555 TRMUO75648 421 aaKnown RBP12.63□□□□□ -0.39
PPP4R1-202ENST00000400555 OR4F21O95013 312 aa12.63□□□□□ -0.39
PPP4R1-202ENST00000400555 PFKPQ01813 784 aa12.63□□□□□ -0.39
PPP4R1-202ENST00000400555 SEMA3AQ14563 771 aa12.63□□□□□ -0.39
PPP4R1-202ENST00000400555 KCTD21Q4G0X4 260 aa12.63□□□□□ -0.39
PPP4R1-202ENST00000400555 GPR141Q7Z602 305 aa12.63□□□□□ -0.39
PPP4R1-202ENST00000400555 FBXO30Q8TB52 745 aa12.63□□□□□ -0.39
PPP4R1-202ENST00000400555 FIG4Q92562 907 aa12.63□□□□□ -0.39
PPP4R1-202ENST00000400555 TSGA13Q96PP4 275 aa12.63□□□□□ -0.39
PPP4R1-202ENST00000400555 TREX1Q9NSU2 369 aa12.63□□□□□ -0.39
PPP4R1-202ENST00000400555 CCDC154A6NI56 674 aa12.62□□□□□ -0.39
PPP4R1-202ENST00000400555 ZBBXA8MT70 800 aa12.62□□□□□ -0.39
PPP4R1-202ENST00000400555 TARM1B6A8C7 271 aa12.62□□□□□ -0.39
PPP4R1-202ENST00000400555 NME4O00746 187 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms